BLASTX nr result
ID: Coptis24_contig00027190
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027190 (218 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002514725.1| sensory transduction histidine kinase, putat... 72 6e-11 ref|XP_002330130.1| pseudo response regulator [Populus trichocar... 72 6e-11 gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa] 71 8e-11 ref|XP_002281757.2| PREDICTED: two-component response regulator-... 71 8e-11 emb|CBI15189.3| unnamed protein product [Vitis vinifera] 71 8e-11 >ref|XP_002514725.1| sensory transduction histidine kinase, putative [Ricinus communis] gi|223546329|gb|EEF47831.1| sensory transduction histidine kinase, putative [Ricinus communis] Length = 550 Score = 71.6 bits (174), Expect = 6e-11 Identities = 35/50 (70%), Positives = 40/50 (80%) Frame = +1 Query: 67 KDGGSSNGSNMPYLDRSKVRILLCDNDAKSSKEVFTLLSKCSYQVTSVRT 216 K+ S G +DRSKVRILLCDND+KSS+EVFTLL KCSYQVTSVR+ Sbjct: 4 KEPNKSGGGGEGLIDRSKVRILLCDNDSKSSEEVFTLLLKCSYQVTSVRS 53 >ref|XP_002330130.1| pseudo response regulator [Populus trichocarpa] gi|222871264|gb|EEF08395.1| pseudo response regulator [Populus trichocarpa] Length = 541 Score = 71.6 bits (174), Expect = 6e-11 Identities = 36/48 (75%), Positives = 42/48 (87%) Frame = +1 Query: 73 GGSSNGSNMPYLDRSKVRILLCDNDAKSSKEVFTLLSKCSYQVTSVRT 216 GG+ +G ++DRSKVRILLCDNDAKSS+EVFTLL KCSYQVTSVR+ Sbjct: 13 GGAGDG----FVDRSKVRILLCDNDAKSSQEVFTLLLKCSYQVTSVRS 56 >gb|AAU20772.1| timing of CAB expression 1 protein [Castanea sativa] Length = 545 Score = 71.2 bits (173), Expect = 8e-11 Identities = 39/63 (61%), Positives = 47/63 (74%), Gaps = 3/63 (4%) Frame = +1 Query: 37 MERNEASGVRKDGGSSN---GSNMPYLDRSKVRILLCDNDAKSSKEVFTLLSKCSYQVTS 207 ME E S R+ GG+S+ G ++DRSKVRIL+CDNDAKS +EV TLL KCSYQVTS Sbjct: 1 MESMEVSLNREGGGNSSKGGGGGDAFIDRSKVRILVCDNDAKSLEEVSTLLLKCSYQVTS 60 Query: 208 VRT 216 VR+ Sbjct: 61 VRS 63 >ref|XP_002281757.2| PREDICTED: two-component response regulator-like APRR1-like [Vitis vinifera] Length = 556 Score = 71.2 bits (173), Expect = 8e-11 Identities = 37/60 (61%), Positives = 44/60 (73%) Frame = +1 Query: 37 MERNEASGVRKDGGSSNGSNMPYLDRSKVRILLCDNDAKSSKEVFTLLSKCSYQVTSVRT 216 M RNE GGS++ S+ ++DRS VRILLCDND KSS E+FTLL CSYQVTSVR+ Sbjct: 3 MARNEIGS----GGSNSKSSDSFIDRSNVRILLCDNDTKSSDEIFTLLCGCSYQVTSVRS 58 >emb|CBI15189.3| unnamed protein product [Vitis vinifera] Length = 533 Score = 71.2 bits (173), Expect = 8e-11 Identities = 37/60 (61%), Positives = 44/60 (73%) Frame = +1 Query: 37 MERNEASGVRKDGGSSNGSNMPYLDRSKVRILLCDNDAKSSKEVFTLLSKCSYQVTSVRT 216 M RNE GGS++ S+ ++DRS VRILLCDND KSS E+FTLL CSYQVTSVR+ Sbjct: 1 MARNEIGS----GGSNSKSSDSFIDRSNVRILLCDNDTKSSDEIFTLLCGCSYQVTSVRS 56