BLASTX nr result

ID: Coptis24_contig00027183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027183
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552431.1| PREDICTED: uncharacterized protein LOC100781...   134   1e-29
ref|XP_003533586.1| PREDICTED: uncharacterized protein LOC100815...   132   2e-29
ref|XP_002329006.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28
gb|ABK95080.1| unknown [Populus trichocarpa]                          129   2e-28
ref|NP_197156.2| uncharacterized protein [Arabidopsis thaliana] ...   129   3e-28

>ref|XP_003552431.1| PREDICTED: uncharacterized protein LOC100781305 [Glycine max]
          Length = 617

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/89 (69%), Positives = 78/89 (87%)
 Frame = +2

Query: 2   SELQASLQRSQDGLINTTLVVNFLSSYIIEIDTQNILGPVSFLADLGGLYAISFTIFFYF 181
           +EL+ASL+ S DGL+NTTL +NFLS Y++EID QNILGPVSFLADLGGLY IS  IFFY 
Sbjct: 348 NELRASLESSTDGLVNTTLFINFLSDYVVEIDKQNILGPVSFLADLGGLYCISIGIFFYL 407

Query: 182 LMQCEYRFKKLRHEDSVLQNIRSRKKAKK 268
           L+QCEYR KKLR+EDS+++ IR+R+KA++
Sbjct: 408 LIQCEYRIKKLRNEDSIMRRIRNRRKAQE 436


>ref|XP_003533586.1| PREDICTED: uncharacterized protein LOC100815316 [Glycine max]
          Length = 612

 Score =  132 bits (333), Expect = 2e-29
 Identities = 61/89 (68%), Positives = 78/89 (87%)
 Frame = +2

Query: 2   SELQASLQRSQDGLINTTLVVNFLSSYIIEIDTQNILGPVSFLADLGGLYAISFTIFFYF 181
           +EL+ASL+ S DGL+NTTL +NFLS Y++EID +NILGPVSFLADLGGLY IS  IFFY 
Sbjct: 348 NELRASLESSTDGLVNTTLFINFLSDYVVEIDKENILGPVSFLADLGGLYCISIGIFFYL 407

Query: 182 LMQCEYRFKKLRHEDSVLQNIRSRKKAKK 268
           L+QCEYR KKLR+EDS+++ IR+R+KA++
Sbjct: 408 LIQCEYRIKKLRNEDSIMRRIRNRRKAQE 436


>ref|XP_002329006.1| predicted protein [Populus trichocarpa] gi|222839240|gb|EEE77591.1|
           predicted protein [Populus trichocarpa]
          Length = 614

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/89 (68%), Positives = 78/89 (87%)
 Frame = +2

Query: 2   SELQASLQRSQDGLINTTLVVNFLSSYIIEIDTQNILGPVSFLADLGGLYAISFTIFFYF 181
           S+LQASL+ S DGLINTTL +++LSSYI+EI++QNI+GPVSFLADLGGLY IS  IFFYF
Sbjct: 358 SQLQASLETSSDGLINTTLSISYLSSYIVEIESQNIMGPVSFLADLGGLYCISIGIFFYF 417

Query: 182 LMQCEYRFKKLRHEDSVLQNIRSRKKAKK 268
           L+QCEYR K+LR+ED  ++ IR+R KA++
Sbjct: 418 LVQCEYRVKRLRNEDVTMRQIRNRLKARE 446


>gb|ABK95080.1| unknown [Populus trichocarpa]
          Length = 457

 Score =  129 bits (324), Expect = 2e-28
 Identities = 61/89 (68%), Positives = 78/89 (87%)
 Frame = +2

Query: 2   SELQASLQRSQDGLINTTLVVNFLSSYIIEIDTQNILGPVSFLADLGGLYAISFTIFFYF 181
           S+LQASL+ S DGLINTTL +++LSSYI+EI++QNI+GPVSFLADLGGLY IS  IFFYF
Sbjct: 165 SQLQASLETSSDGLINTTLSISYLSSYIVEIESQNIMGPVSFLADLGGLYCISIGIFFYF 224

Query: 182 LMQCEYRFKKLRHEDSVLQNIRSRKKAKK 268
           L+QCEYR K+LR+ED  ++ IR+R KA++
Sbjct: 225 LVQCEYRVKRLRNEDVTMRQIRNRLKARE 253


>ref|NP_197156.2| uncharacterized protein [Arabidopsis thaliana]
           gi|27311737|gb|AAO00834.1| unknown protein [Arabidopsis
           thaliana] gi|30725414|gb|AAP37729.1| At5g16520
           [Arabidopsis thaliana] gi|332004921|gb|AED92304.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 608

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/87 (68%), Positives = 76/87 (87%)
 Frame = +2

Query: 2   SELQASLQRSQDGLINTTLVVNFLSSYIIEIDTQNILGPVSFLADLGGLYAISFTIFFYF 181
           ++LQAS+ RS DG++NTTL +N+LS+YI+EID +NILGPVSFLADLGGLY IS  IFFY 
Sbjct: 348 TQLQASMGRSTDGILNTTLFINYLSAYIVEIDHENILGPVSFLADLGGLYCISIGIFFYL 407

Query: 182 LMQCEYRFKKLRHEDSVLQNIRSRKKA 262
           L+QCEYR KKLR+ED+V + IR+R+KA
Sbjct: 408 LVQCEYRIKKLRNEDTVFRKIRNRRKA 434


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