BLASTX nr result
ID: Coptis24_contig00027173
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027173 (866 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein... 114 4e-23 emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera] 114 4e-23 ref|XP_002516561.1| ubiquitin-protein ligase, putative [Ricinus ... 107 4e-21 ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g... 107 4e-21 emb|CBI23315.3| unnamed protein product [Vitis vinifera] 97 5e-18 >ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis vinifera] Length = 610 Score = 114 bits (284), Expect = 4e-23 Identities = 80/223 (35%), Positives = 111/223 (49%) Frame = +1 Query: 196 GNDTELQKSWELSQDDIKDQDRISSLPDDIMFHVLSLLEMKDVVKTGVLSRRWGHLWTNV 375 G+D E E+S +D IS L D I+ +LS L MK VV T +LS+RW LWT V Sbjct: 58 GDDDEDDGDEEISSR----KDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMV 113 Query: 376 RTLDFRGPTSCEEEAREKFVSFVDYTLLFNESKTIKTFHLLLGLTEAFPEDISEEEAKRV 555 L FR E FV+ +D TL+ +++ IK F + F ++ Sbjct: 114 PNLVFRF-----RRRDEHFVNSIDKTLVLHQNSQIKKFLIDFTYQSQFQSSVNV------ 162 Query: 556 KELCLHIDRWVRLAVRKKVEIVYLDFFTVNTRWRGCLLSLYPYNLPCSLYINNTIKSLLL 735 W+R A RK VE ++L F V R + Y + LP LY N++I L L Sbjct: 163 ---------WIRHATRKNVEELHLQF-RVGQHIRSSPMD-YAHALPQFLYANSSIVKLSL 211 Query: 736 ASCSIDPTRQLQWKYLKVLRLFDVKLCEELVETILNGSPLLES 864 C+I PT + W LK L + V+LC++L+E IL+G P LES Sbjct: 212 WFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALES 254 >emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera] Length = 891 Score = 114 bits (284), Expect = 4e-23 Identities = 80/223 (35%), Positives = 111/223 (49%) Frame = +1 Query: 196 GNDTELQKSWELSQDDIKDQDRISSLPDDIMFHVLSLLEMKDVVKTGVLSRRWGHLWTNV 375 G+D E E+S +D IS L D I+ +LS L MK VV T +LS+RW LWT V Sbjct: 58 GDDDEDDGDEEISSR----KDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMV 113 Query: 376 RTLDFRGPTSCEEEAREKFVSFVDYTLLFNESKTIKTFHLLLGLTEAFPEDISEEEAKRV 555 L FR E FV+ +D TL+ +++ IK F + F ++ Sbjct: 114 PNLVFRF-----RRRDEHFVNSIDKTLVLHQNSQIKKFLIDFTYQSQFQSSVNV------ 162 Query: 556 KELCLHIDRWVRLAVRKKVEIVYLDFFTVNTRWRGCLLSLYPYNLPCSLYINNTIKSLLL 735 W+R A RK VE ++L F V R + Y + LP LY N++I L L Sbjct: 163 ---------WIRHATRKNVEELHLQF-RVGQHIRSSPMD-YAHALPQFLYANSSIVKLSL 211 Query: 736 ASCSIDPTRQLQWKYLKVLRLFDVKLCEELVETILNGSPLLES 864 C+I PT + W LK L + V+LC++L+E IL+G P LES Sbjct: 212 WFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALES 254 >ref|XP_002516561.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223544381|gb|EEF45902.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 348 Score = 107 bits (267), Expect = 4e-21 Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 1/206 (0%) Frame = +1 Query: 250 DQDRISSLPDDIMFHVLS-LLEMKDVVKTGVLSRRWGHLWTNVRTLDFRGPTSCEEEARE 426 ++D ISSLPD ++ H+LS LL ++ VKTG+LS+RW WT V+ L+F P +E + Sbjct: 19 EEDGISSLPDTLIHHILSFLLSTEEAVKTGILSKRWRDQWTYVQNLNFNYPYCFSDEKLK 78 Query: 427 KFVSFVDYTLLFNESKTIKTFHLLLGLTEAFPEDISEEEAKRVKELCLHIDRWVRLAVRK 606 F F+ TL+ N I F + L+ K + E I +R A++K Sbjct: 79 CFSKFIHNTLVLNSCSKINKFSISPRLS----------SDKYMSEYQSQISLCMRFAIKK 128 Query: 607 KVEIVYLDFFTVNTRWRGCLLSLYPYNLPCSLYINNTIKSLLLASCSIDPTRQLQWKYLK 786 + +++ LDF N Y LP Y N+++ + L+SC + W+ LK Sbjct: 129 EAKVLTLDFHPSN----------QGYRLPQFFYSNDSVTEMTLSSCGFSLNADVNWRSLK 178 Query: 787 VLRLFDVKLCEELVETILNGSPLLES 864 VL + L +++ IL+GSP LES Sbjct: 179 VLCIQFAYLTNRVIKDILSGSPQLES 204 >ref|XP_002300142.1| f-box family protein [Populus trichocarpa] gi|222847400|gb|EEE84947.1| f-box family protein [Populus trichocarpa] Length = 481 Score = 107 bits (267), Expect = 4e-21 Identities = 76/204 (37%), Positives = 99/204 (48%), Gaps = 2/204 (0%) Frame = +1 Query: 256 DRISSLPDDIMFHVLSLLEMKDVVKTGVLSRRWGHLWTNVRTLDFRGPTSCEEEAREKFV 435 DRIS+LPD I+ H+LS L D +KT +LS+RW +WT V L FR SC +EA E F Sbjct: 45 DRISNLPDPIIQHILSFLPADDAIKTCILSKRWDSIWTLVPNLIFRRECSCSQEA-ENFA 103 Query: 436 SFVDYTLLFNESKTIKTFHLLLGLTEAFPEDISEEEAKRVKELCLHIDRWVRLAVRKKVE 615 FVD L+ S +K F + TE F +D WV AVR KVE Sbjct: 104 VFVDKALMHYCSPKVKKFLVEFEFTECFK---------------AQVDSWVDFAVRLKVE 148 Query: 616 IVYLDFFTVNTRWRGCLLSLYPYNLPCSLYINNTIKSLLLASCSIDPT--RQLQWKYLKV 789 + L+F R Y LP LY N + L L C++ P +Q+ W LKV Sbjct: 149 ELCLEFH------REIADDPDYYYLPNFLYSNIPAEKLSLRFCALSPNKLKQVSWMSLKV 202 Query: 790 LRLFDVKLCEELVETILNGSPLLE 861 L + L E+++ I G LLE Sbjct: 203 LSISYSWLSNEMIKNIFLGCSLLE 226 >emb|CBI23315.3| unnamed protein product [Vitis vinifera] Length = 340 Score = 97.1 bits (240), Expect = 5e-18 Identities = 66/184 (35%), Positives = 92/184 (50%) Frame = +1 Query: 313 MKDVVKTGVLSRRWGHLWTNVRTLDFRGPTSCEEEAREKFVSFVDYTLLFNESKTIKTFH 492 MK VV T +LS+RW LWT V L FR E FV+ +D TL+ +++ IK F Sbjct: 1 MKYVVATSILSKRWQFLWTMVPNLVFRF-----RRRDEHFVNSIDKTLVLHQNSQIKKFL 55 Query: 493 LLLGLTEAFPEDISEEEAKRVKELCLHIDRWVRLAVRKKVEIVYLDFFTVNTRWRGCLLS 672 + F ++ W+R A RK VE ++L F V R + Sbjct: 56 IDFTYQSQFQSSVNV---------------WIRHATRKNVEELHLQF-RVGQHIRSSPMD 99 Query: 673 LYPYNLPCSLYINNTIKSLLLASCSIDPTRQLQWKYLKVLRLFDVKLCEELVETILNGSP 852 Y + LP LY N++I L L C+I PT + W LK L + V+LC++L+E IL+G P Sbjct: 100 -YAHALPQFLYANSSIVKLSLWFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCP 158 Query: 853 LLES 864 LES Sbjct: 159 ALES 162