BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027173
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...   114   4e-23
emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]   114   4e-23
ref|XP_002516561.1| ubiquitin-protein ligase, putative [Ricinus ...   107   4e-21
ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g...   107   4e-21
emb|CBI23315.3| unnamed protein product [Vitis vinifera]               97   5e-18

>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
           vinifera]
          Length = 610

 Score =  114 bits (284), Expect = 4e-23
 Identities = 80/223 (35%), Positives = 111/223 (49%)
 Frame = +1

Query: 196 GNDTELQKSWELSQDDIKDQDRISSLPDDIMFHVLSLLEMKDVVKTGVLSRRWGHLWTNV 375
           G+D E     E+S      +D IS L D I+  +LS L MK VV T +LS+RW  LWT V
Sbjct: 58  GDDDEDDGDEEISSR----KDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMV 113

Query: 376 RTLDFRGPTSCEEEAREKFVSFVDYTLLFNESKTIKTFHLLLGLTEAFPEDISEEEAKRV 555
             L FR          E FV+ +D TL+ +++  IK F +       F   ++       
Sbjct: 114 PNLVFRF-----RRRDEHFVNSIDKTLVLHQNSQIKKFLIDFTYQSQFQSSVNV------ 162

Query: 556 KELCLHIDRWVRLAVRKKVEIVYLDFFTVNTRWRGCLLSLYPYNLPCSLYINNTIKSLLL 735
                    W+R A RK VE ++L F  V    R   +  Y + LP  LY N++I  L L
Sbjct: 163 ---------WIRHATRKNVEELHLQF-RVGQHIRSSPMD-YAHALPQFLYANSSIVKLSL 211

Query: 736 ASCSIDPTRQLQWKYLKVLRLFDVKLCEELVETILNGSPLLES 864
             C+I PT  + W  LK L +  V+LC++L+E IL+G P LES
Sbjct: 212 WFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALES 254


>emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]
          Length = 891

 Score =  114 bits (284), Expect = 4e-23
 Identities = 80/223 (35%), Positives = 111/223 (49%)
 Frame = +1

Query: 196 GNDTELQKSWELSQDDIKDQDRISSLPDDIMFHVLSLLEMKDVVKTGVLSRRWGHLWTNV 375
           G+D E     E+S      +D IS L D I+  +LS L MK VV T +LS+RW  LWT V
Sbjct: 58  GDDDEDDGDEEISSR----KDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMV 113

Query: 376 RTLDFRGPTSCEEEAREKFVSFVDYTLLFNESKTIKTFHLLLGLTEAFPEDISEEEAKRV 555
             L FR          E FV+ +D TL+ +++  IK F +       F   ++       
Sbjct: 114 PNLVFRF-----RRRDEHFVNSIDKTLVLHQNSQIKKFLIDFTYQSQFQSSVNV------ 162

Query: 556 KELCLHIDRWVRLAVRKKVEIVYLDFFTVNTRWRGCLLSLYPYNLPCSLYINNTIKSLLL 735
                    W+R A RK VE ++L F  V    R   +  Y + LP  LY N++I  L L
Sbjct: 163 ---------WIRHATRKNVEELHLQF-RVGQHIRSSPMD-YAHALPQFLYANSSIVKLSL 211

Query: 736 ASCSIDPTRQLQWKYLKVLRLFDVKLCEELVETILNGSPLLES 864
             C+I PT  + W  LK L +  V+LC++L+E IL+G P LES
Sbjct: 212 WFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCPALES 254


>ref|XP_002516561.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223544381|gb|EEF45902.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 348

 Score =  107 bits (267), Expect = 4e-21
 Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 1/206 (0%)
 Frame = +1

Query: 250 DQDRISSLPDDIMFHVLS-LLEMKDVVKTGVLSRRWGHLWTNVRTLDFRGPTSCEEEARE 426
           ++D ISSLPD ++ H+LS LL  ++ VKTG+LS+RW   WT V+ L+F  P    +E  +
Sbjct: 19  EEDGISSLPDTLIHHILSFLLSTEEAVKTGILSKRWRDQWTYVQNLNFNYPYCFSDEKLK 78

Query: 427 KFVSFVDYTLLFNESKTIKTFHLLLGLTEAFPEDISEEEAKRVKELCLHIDRWVRLAVRK 606
            F  F+  TL+ N    I  F +   L+            K + E    I   +R A++K
Sbjct: 79  CFSKFIHNTLVLNSCSKINKFSISPRLS----------SDKYMSEYQSQISLCMRFAIKK 128

Query: 607 KVEIVYLDFFTVNTRWRGCLLSLYPYNLPCSLYINNTIKSLLLASCSIDPTRQLQWKYLK 786
           + +++ LDF   N            Y LP   Y N+++  + L+SC       + W+ LK
Sbjct: 129 EAKVLTLDFHPSN----------QGYRLPQFFYSNDSVTEMTLSSCGFSLNADVNWRSLK 178

Query: 787 VLRLFDVKLCEELVETILNGSPLLES 864
           VL +    L   +++ IL+GSP LES
Sbjct: 179 VLCIQFAYLTNRVIKDILSGSPQLES 204


>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
           gi|222847400|gb|EEE84947.1| f-box family protein
           [Populus trichocarpa]
          Length = 481

 Score =  107 bits (267), Expect = 4e-21
 Identities = 76/204 (37%), Positives = 99/204 (48%), Gaps = 2/204 (0%)
 Frame = +1

Query: 256 DRISSLPDDIMFHVLSLLEMKDVVKTGVLSRRWGHLWTNVRTLDFRGPTSCEEEAREKFV 435
           DRIS+LPD I+ H+LS L   D +KT +LS+RW  +WT V  L FR   SC +EA E F 
Sbjct: 45  DRISNLPDPIIQHILSFLPADDAIKTCILSKRWDSIWTLVPNLIFRRECSCSQEA-ENFA 103

Query: 436 SFVDYTLLFNESKTIKTFHLLLGLTEAFPEDISEEEAKRVKELCLHIDRWVRLAVRKKVE 615
            FVD  L+   S  +K F +    TE F                  +D WV  AVR KVE
Sbjct: 104 VFVDKALMHYCSPKVKKFLVEFEFTECFK---------------AQVDSWVDFAVRLKVE 148

Query: 616 IVYLDFFTVNTRWRGCLLSLYPYNLPCSLYINNTIKSLLLASCSIDPT--RQLQWKYLKV 789
            + L+F       R        Y LP  LY N   + L L  C++ P   +Q+ W  LKV
Sbjct: 149 ELCLEFH------REIADDPDYYYLPNFLYSNIPAEKLSLRFCALSPNKLKQVSWMSLKV 202

Query: 790 LRLFDVKLCEELVETILNGSPLLE 861
           L +    L  E+++ I  G  LLE
Sbjct: 203 LSISYSWLSNEMIKNIFLGCSLLE 226


>emb|CBI23315.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score = 97.1 bits (240), Expect = 5e-18
 Identities = 66/184 (35%), Positives = 92/184 (50%)
 Frame = +1

Query: 313 MKDVVKTGVLSRRWGHLWTNVRTLDFRGPTSCEEEAREKFVSFVDYTLLFNESKTIKTFH 492
           MK VV T +LS+RW  LWT V  L FR          E FV+ +D TL+ +++  IK F 
Sbjct: 1   MKYVVATSILSKRWQFLWTMVPNLVFRF-----RRRDEHFVNSIDKTLVLHQNSQIKKFL 55

Query: 493 LLLGLTEAFPEDISEEEAKRVKELCLHIDRWVRLAVRKKVEIVYLDFFTVNTRWRGCLLS 672
           +       F   ++                W+R A RK VE ++L F  V    R   + 
Sbjct: 56  IDFTYQSQFQSSVNV---------------WIRHATRKNVEELHLQF-RVGQHIRSSPMD 99

Query: 673 LYPYNLPCSLYINNTIKSLLLASCSIDPTRQLQWKYLKVLRLFDVKLCEELVETILNGSP 852
            Y + LP  LY N++I  L L  C+I PT  + W  LK L +  V+LC++L+E IL+G P
Sbjct: 100 -YAHALPQFLYANSSIVKLSLWFCNIKPTWVISWPSLKTLSIGSVELCDDLIEEILSGCP 158

Query: 853 LLES 864
            LES
Sbjct: 159 ALES 162