BLASTX nr result

ID: Coptis24_contig00027160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027160
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569059.1| PREDICTED: metal tolerance protein 1-like [B...    78   6e-13
ref|NP_001242638.1| uncharacterized protein LOC100790458 [Glycin...    77   1e-12
ref|NP_001149065.1| metal tolerance protein A2 [Zea mays] gi|195...    77   1e-12
gb|AFK39070.1| unknown [Lotus japonicus]                               76   1e-12
emb|CCI55403.1| PH01B015M02.4 [Phyllostachys edulis]                   77   2e-12

>ref|XP_003569059.1| PREDICTED: metal tolerance protein 1-like [Brachypodium distachyon]
          Length = 419

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 44/85 (51%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
 Frame = +3

Query: 174 KRCQSMTGIYAKLLIAIVLCVIFMTVEVIGDIKANNLTFS*CSTSQFR--CSFFLCLCSP 347
           K  Q  +    KLLIA++LCVIFM VEV+G IKAN+L     +        +F + L S 
Sbjct: 45  KDAQERSASMRKLLIAVILCVIFMAVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFS- 103

Query: 348 LWASGWEATPCNSYGFFRNEVLGTL 422
           LWA+GWEATP  SYGFFR E+LG L
Sbjct: 104 LWAAGWEATPQQSYGFFRIEILGAL 128


>ref|NP_001242638.1| uncharacterized protein LOC100790458 [Glycine max]
           gi|255636097|gb|ACU18393.1| unknown [Glycine max]
          Length = 397

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 43/74 (58%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
 Frame = +3

Query: 207 KLLIAIVLCVIFMTVEVIGDIKANNLTFS*CSTSQFR--CSFFLCLCSPLWASGWEATPC 380
           KL +A+VLCVIFMTVEV+G IKAN+L     +        SF + L S LWA+GWEATP 
Sbjct: 52  KLFMAVVLCVIFMTVEVVGGIKANSLAILTDAAHLLSDVASFAISLFS-LWAAGWEATPR 110

Query: 381 NSYGFFRNEVLGTL 422
            SYGFFR E+LG L
Sbjct: 111 QSYGFFRIEILGAL 124


>ref|NP_001149065.1| metal tolerance protein A2 [Zea mays] gi|195624458|gb|ACG34059.1|
           metal tolerance protein A2 [Zea mays]
           gi|219885615|gb|ACL53182.1| unknown [Zea mays]
           gi|413950091|gb|AFW82740.1| metal tolerance protein A2
           isoform 1 [Zea mays] gi|413950092|gb|AFW82741.1| metal
           tolerance protein A2 isoform 2 [Zea mays]
           gi|413950093|gb|AFW82742.1| metal tolerance protein A2
           isoform 3 [Zea mays]
          Length = 414

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/74 (55%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
 Frame = +3

Query: 207 KLLIAIVLCVIFMTVEVIGDIKANNLTFS*CSTSQFR--CSFFLCLCSPLWASGWEATPC 380
           KL+IA++LC+IFMTVEV+G IKAN+L     +        +F + L S LWA+GWEATP 
Sbjct: 57  KLIIAVILCIIFMTVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFS-LWAAGWEATPQ 115

Query: 381 NSYGFFRNEVLGTL 422
            SYGFFR E+LG L
Sbjct: 116 QSYGFFRIEILGAL 129


>gb|AFK39070.1| unknown [Lotus japonicus]
          Length = 407

 Score = 76.3 bits (186), Expect(2) = 1e-12
 Identities = 41/74 (55%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
 Frame = +3

Query: 207 KLLIAIVLCVIFMTVEVIGDIKANNLTFS*CSTSQFR--CSFFLCLCSPLWASGWEATPC 380
           KLL+A++LCVIFMTVEV+G IKAN+L     +        +F + L S LWA+GWEA P 
Sbjct: 51  KLLVAVILCVIFMTVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFS-LWAAGWEANPR 109

Query: 381 NSYGFFRNEVLGTL 422
            SYGFFR E+LG L
Sbjct: 110 QSYGFFRIEILGAL 123



 Score = 21.2 bits (43), Expect(2) = 1e-12
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 56  SKES*KSMLYQVGDQVWELNVFCGVAGCEFAN 151
           ++ S    + ++G  + E    CG A C FA+
Sbjct: 3   AQSSQHGQVIEIGGDLCEERKICGEAPCGFAD 34


>emb|CCI55403.1| PH01B015M02.4 [Phyllostachys edulis]
          Length = 468

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
 Frame = +3

Query: 174 KRCQSMTGIYAKLLIAIVLCVIFMTVEVIGDIKANNLTFS*CSTSQFR--CSFFLCLCSP 347
           K  +  T    KL+IA++LC+IFM+VEV+G IKAN+L     +        +F + L S 
Sbjct: 98  KDAKERTTSMRKLIIAVILCIIFMSVEVVGGIKANSLAILTDAAHLLSDVAAFAISLFS- 156

Query: 348 LWASGWEATPCNSYGFFRNEVLGTL 422
           LWA+GWEATP  SYGFFR E+LG L
Sbjct: 157 LWAAGWEATPQQSYGFFRIEILGAL 181


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