BLASTX nr result

ID: Coptis24_contig00027154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027154
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321490.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-25
gb|AAF25984.1|AC013354_3 F15H18.12 [Arabidopsis thaliana]              91   2e-24
ref|NP_173273.2| ATP binding microtubule motor family protein [A...    91   2e-24
ref|XP_002516209.1| microtubule motor, putative [Ricinus communi...    88   4e-24
ref|XP_003534160.1| PREDICTED: uncharacterized protein LOC100775...    88   7e-24

>ref|XP_002321490.1| predicted protein [Populus trichocarpa] gi|222868486|gb|EEF05617.1|
           predicted protein [Populus trichocarpa]
          Length = 965

 Score = 93.2 bits (230), Expect(2) = 3e-25
 Identities = 45/61 (73%), Positives = 53/61 (86%)
 Frame = +3

Query: 180 KNGHGHNISSREGAPGSSRVKSVNVKKMQEMFKNAAEQNIRSIRAYVTELKERVAKLQYQ 359
           KN  G ++SSREG PG  R  SVN+KKMQ+MF+NAAE+N+R+IRAYVTELKERVAKLQYQ
Sbjct: 681 KNEEGGDVSSREGTPGYRRSSSVNMKKMQKMFQNAAEENVRNIRAYVTELKERVAKLQYQ 740

Query: 360 K 362
           K
Sbjct: 741 K 741



 Score = 47.0 bits (110), Expect(2) = 3e-25
 Identities = 20/50 (40%), Positives = 30/50 (60%)
 Frame = +2

Query: 2   LPSPLRNSTNRSHIIRYPCSPMSSSSDVMDLEQENKPPQNEGFVSGHDAP 151
           LP    N +NR + IR PCSP+S+S  +++ E EN+ P N+  V+    P
Sbjct: 623 LPLASSNGSNRQNFIRSPCSPLSTSRQILEKEIENRDPYNDDIVASETLP 672


>gb|AAF25984.1|AC013354_3 F15H18.12 [Arabidopsis thaliana]
          Length = 1003

 Score = 91.3 bits (225), Expect(2) = 2e-24
 Identities = 45/63 (71%), Positives = 52/63 (82%)
 Frame = +3

Query: 174 P*KNGHGHNISSREGAPGSSRVKSVNVKKMQEMFKNAAEQNIRSIRAYVTELKERVAKLQ 353
           P K     ++SSREG PG  R  SVN+KKMQ+MF+NAAE+N+RSIRAYVTELKERVAKLQ
Sbjct: 717 PQKGEESGDVSSREGTPGYRRSSSVNMKKMQQMFQNAAEENVRSIRAYVTELKERVAKLQ 776

Query: 354 YQK 362
           YQK
Sbjct: 777 YQK 779



 Score = 46.2 bits (108), Expect(2) = 2e-24
 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = +2

Query: 2   LPSPLRNSTNRSHIIRYPCSPMSSSSDVMDLEQENKPPQ--NEGFVSGHDAPLQSCRATP 175
           LP    +++NR + ++ PCSP+S+S  V+D + ENK PQ  N     G   P  S + TP
Sbjct: 658 LPLTPSSASNRQNFLKSPCSPLSASRQVLDCDAENKAPQENNSSAARGATTPQGSEKETP 717

Query: 176 IK 181
            K
Sbjct: 718 QK 719


>ref|NP_173273.2| ATP binding microtubule motor family protein [Arabidopsis thaliana]
           gi|19979627|dbj|BAB88748.1| AtNACK1 kinesin-like protein
           [Arabidopsis thaliana] gi|332191587|gb|AEE29708.1| ATP
           binding microtubule motor family protein [Arabidopsis
           thaliana]
          Length = 974

 Score = 91.3 bits (225), Expect(2) = 2e-24
 Identities = 45/63 (71%), Positives = 52/63 (82%)
 Frame = +3

Query: 174 P*KNGHGHNISSREGAPGSSRVKSVNVKKMQEMFKNAAEQNIRSIRAYVTELKERVAKLQ 353
           P K     ++SSREG PG  R  SVN+KKMQ+MF+NAAE+N+RSIRAYVTELKERVAKLQ
Sbjct: 688 PQKGEESGDVSSREGTPGYRRSSSVNMKKMQQMFQNAAEENVRSIRAYVTELKERVAKLQ 747

Query: 354 YQK 362
           YQK
Sbjct: 748 YQK 750



 Score = 46.2 bits (108), Expect(2) = 2e-24
 Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = +2

Query: 2   LPSPLRNSTNRSHIIRYPCSPMSSSSDVMDLEQENKPPQ--NEGFVSGHDAPLQSCRATP 175
           LP    +++NR + ++ PCSP+S+S  V+D + ENK PQ  N     G   P  S + TP
Sbjct: 629 LPLTPSSASNRQNFLKSPCSPLSASRQVLDCDAENKAPQENNSSAARGATTPQGSEKETP 688

Query: 176 IK 181
            K
Sbjct: 689 QK 690


>ref|XP_002516209.1| microtubule motor, putative [Ricinus communis]
           gi|223544695|gb|EEF46211.1| microtubule motor, putative
           [Ricinus communis]
          Length = 891

 Score = 87.8 bits (216), Expect(2) = 4e-24
 Identities = 48/66 (72%), Positives = 53/66 (80%)
 Frame = +3

Query: 165 ELPP*KNGHGHNISSREGAPGSSRVKSVNVKKMQEMFKNAAEQNIRSIRAYVTELKERVA 344
           E+ P ++      SSREG P +SR  SVNVKKMQ MFKNAAE+NIRSIRAYVTELKERVA
Sbjct: 666 EVTPLRSEKSGYTSSREGTP-NSRSNSVNVKKMQRMFKNAAEENIRSIRAYVTELKERVA 724

Query: 345 KLQYQK 362
           KLQYQK
Sbjct: 725 KLQYQK 730



 Score = 48.5 bits (114), Expect(2) = 4e-24
 Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
 Frame = +2

Query: 5   PSPLRNSTNRSHIIRYPCSPMSSSSDVMD-LEQENKPPQNEGFVSGHDAPLQSCRATPIK 181
           P  L NS+N  +IIRYPCSP+SSS  V++  E EN+ P+  G +   +  ++    TP++
Sbjct: 612 PFALSNSSNMQNIIRYPCSPLSSSRGVVNHNEIENRVPETSGSLFSDNTSVRPSEVTPLR 671


>ref|XP_003534160.1| PREDICTED: uncharacterized protein LOC100775206 [Glycine max]
          Length = 962

 Score = 87.8 bits (216), Expect(2) = 7e-24
 Identities = 43/63 (68%), Positives = 52/63 (82%)
 Frame = +3

Query: 174 P*KNGHGHNISSREGAPGSSRVKSVNVKKMQEMFKNAAEQNIRSIRAYVTELKERVAKLQ 353
           P K+    ++SS+E  PG  R  SVN+KKMQ+MF+NAAE+N+RSIRAYVTELKERVAKLQ
Sbjct: 677 PSKSEEAGDVSSKENTPGYRRSSSVNMKKMQKMFQNAAEENVRSIRAYVTELKERVAKLQ 736

Query: 354 YQK 362
           YQK
Sbjct: 737 YQK 739



 Score = 47.8 bits (112), Expect(2) = 7e-24
 Identities = 23/60 (38%), Positives = 37/60 (61%)
 Frame = +2

Query: 2   LPSPLRNSTNRSHIIRYPCSPMSSSSDVMDLEQENKPPQNEGFVSGHDAPLQSCRATPIK 181
           LP    N+ NR + +R PCSP+S++  V++ + EN+ P+N+  VS    P +S + TP K
Sbjct: 621 LPLSSSNAANRQNFLRSPCSPLSTTQQVLESDIENRVPENDDIVSTDTLP-ESEKETPSK 679


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