BLASTX nr result

ID: Coptis24_contig00027149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027149
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268399.1| PREDICTED: B3 domain-containing transcriptio...   189   1e-45
emb|CAN79992.1| hypothetical protein VITISV_002669 [Vitis vinifera]   187   4e-45
emb|CBI38731.3| unnamed protein product [Vitis vinifera]              181   2e-43
ref|XP_002271695.1| PREDICTED: B3 domain-containing protein Os03...   174   4e-41
emb|CAN73636.1| hypothetical protein VITISV_009603 [Vitis vinifera]   174   4e-41

>ref|XP_002268399.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
           [Vitis vinifera]
          Length = 461

 Score =  189 bits (479), Expect = 1e-45
 Identities = 109/217 (50%), Positives = 126/217 (58%), Gaps = 23/217 (10%)
 Frame = +3

Query: 3   QSYVMTKGWSRFVKEKKLYAGDIVSFQRGAGETVKDRLYIDWRRRSDVQDPGTXXXXXXX 182
           QSYVMTKGWSRFVKEKKL AGDIVSF+RG GE+ KDRLYIDWRRR D  DP +       
Sbjct: 199 QSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRRRPDAPDPTSLSHLHLP 258

Query: 183 XXXXXXRSAPWG---GLXXXXXXXXXXXXNDVLWQRLNY------------------EHS 299
                 +S  WG    L                 Q+LNY                   H 
Sbjct: 259 TQLPFSQSVRWGRLYSLPQSPSMSMNMPQGHDHMQQLNYSSIHPYHRHHHHHPHHHHHHH 318

Query: 300 LNHQQRTNFSGVPNGYNVVSSGSGPIFYL-RSAASQQIGVVQPGGDAPMVFNSVPVVHGK 476
            +H QR    G  + YN V+SGSG ++YL  S++S QIG VQ GGDAPMV NSVPVVHGK
Sbjct: 319 HHHHQRNTLGGGYHDYNAVTSGSGSLYYLSSSSSSHQIGAVQQGGDAPMVINSVPVVHGK 378

Query: 477 ASAKRLRLFGVNLDCPTP-ENPEYQFLDSPTINHPTM 584
            +AKRLRLFGVN++C TP ++PE   L S  I H TM
Sbjct: 379 TTAKRLRLFGVNMECSTPDDHPECNILPSTAIPHVTM 415


>emb|CAN79992.1| hypothetical protein VITISV_002669 [Vitis vinifera]
          Length = 431

 Score =  187 bits (474), Expect = 4e-45
 Identities = 109/222 (49%), Positives = 126/222 (56%), Gaps = 28/222 (12%)
 Frame = +3

Query: 3   QSYVMTKGWSRFVKEKKLYAGDIVSFQRGAGETVKDRLYIDWRRRSDVQDPGTXXXXXXX 182
           QSYVMTKGWSRFVKEKKL AGDIVSF+RG GE+ KDRLYIDWRRR D  DP +       
Sbjct: 164 QSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRRRPDAPDPTSLSHLHLP 223

Query: 183 XXXXXXRSAPWG---GLXXXXXXXXXXXXNDVLWQRLNYE-------------------- 293
                 +S  WG    L                 Q+LNY                     
Sbjct: 224 TQLPFSQSVRWGRLYSLPQSPSMSMNMPQGHDHMQQLNYSSIHPYHRPTISPHHHHHPHH 283

Query: 294 ---HSLNHQQRTNFSGVPNGYNVVSSGSGPIFYLRSAASQ-QIGVVQPGGDAPMVFNSVP 461
              H  +H QR    G  + YN V+SGSG ++YL S++S  QIG VQ GGDAPMV NSVP
Sbjct: 284 HHHHHHHHHQRNTLGGGYHDYNAVTSGSGSLYYLSSSSSSHQIGAVQQGGDAPMVINSVP 343

Query: 462 VVHGKASAKRLRLFGVNLDCPTP-ENPEYQFLDSPTINHPTM 584
           VVHGK +AKRLRLFGVN++C TP ++PE   L S  I H TM
Sbjct: 344 VVHGKTTAKRLRLFGVNMECSTPDDHPECNILPSTAIPHVTM 385


>emb|CBI38731.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  181 bits (460), Expect = 2e-43
 Identities = 104/196 (53%), Positives = 120/196 (61%), Gaps = 2/196 (1%)
 Frame = +3

Query: 3   QSYVMTKGWSRFVKEKKLYAGDIVSFQRGAGETVKDRLYIDWRRRSDVQDPGTXXXXXXX 182
           QSYVMTKGWSRFVKEKKL AGDIVSF+RG GE+ KDRLYIDWRRR D  DP +       
Sbjct: 155 QSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRRRPDAPDPTSLSHLHLP 214

Query: 183 XXXXXXRSAPWGGLXXXXXXXXXXXXNDVLWQRLNYEHSLNHQQRTNFSGVPNGYNVVSS 362
                 +S  WG L                       +SL     T   G  + YN V+S
Sbjct: 215 TQLPFSQSVRWGRL-----------------------YSLPQSPNT-LGGGYHDYNAVTS 250

Query: 363 GSGPIFYL-RSAASQQIGVVQPGGDAPMVFNSVPVVHGKASAKRLRLFGVNLDCPTP-EN 536
           GSG ++YL  S++S QIG VQ GGDAPMV NSVPVVHGK +AKRLRLFGVN++C TP ++
Sbjct: 251 GSGSLYYLSSSSSSHQIGAVQQGGDAPMVINSVPVVHGKTTAKRLRLFGVNMECSTPDDH 310

Query: 537 PEYQFLDSPTINHPTM 584
           PE   L S  I H TM
Sbjct: 311 PECNILPSTAIPHVTM 326


>ref|XP_002271695.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Vitis
           vinifera]
          Length = 411

 Score =  174 bits (440), Expect = 4e-41
 Identities = 101/195 (51%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
 Frame = +3

Query: 3   QSYVMTKGWSRFVKEKKLYAGDIVSFQRGAGETVKDRLYIDWRRRSDVQDPGTXXXXXXX 182
           QSYVMTKGWSRFVKEKKL AGDIVSFQRG GE+ KDRLYIDWRRR D  +P +       
Sbjct: 172 QSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSS------L 225

Query: 183 XXXXXXRSAPWGGLXXXXXXXXXXXXNDVLWQRLNYEHSLNHQQRTN--FSGVPNGYNVV 356
                 RS PW  L                  +L   + ++H    N   SG  +  N V
Sbjct: 226 AHHFFHRSVPWSPLFLQAPVAGGAVSMGRQQVQLAQPNYMSHLGGRNPYGSGAYSYNNAV 285

Query: 357 SSGSGPIFYLRSAASQQIGV--VQPGGDAPMVFNSVPVVHGKASAKRLRLFGVNLDCPTP 530
           +  SG +FYLR  A QQ+G+  VQ GG  PMVFNSVPVVHGKA+AKRLRLFGVN++CP  
Sbjct: 286 NPCSGSVFYLRPTAPQQVGMVQVQQGGVEPMVFNSVPVVHGKAAAKRLRLFGVNMECPIS 345

Query: 531 ENPEYQFLDSPTINH 575
           E+ E   L S +I H
Sbjct: 346 ESDECDILSSTSIPH 360


>emb|CAN73636.1| hypothetical protein VITISV_009603 [Vitis vinifera]
          Length = 505

 Score =  174 bits (440), Expect = 4e-41
 Identities = 101/195 (51%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
 Frame = +3

Query: 3   QSYVMTKGWSRFVKEKKLYAGDIVSFQRGAGETVKDRLYIDWRRRSDVQDPGTXXXXXXX 182
           QSYVMTKGWSRFVKEKKL AGDIVSFQRG GE+ KDRLYIDWRRR D  +P +       
Sbjct: 172 QSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSS------L 225

Query: 183 XXXXXXRSAPWGGLXXXXXXXXXXXXNDVLWQRLNYEHSLNHQQRTN--FSGVPNGYNVV 356
                 RS PW  L                  +L   + ++H    N   SG  +  N V
Sbjct: 226 AHHFFHRSVPWSPLFLQAPVAGGAVSMGRQQVQLAQPNYMSHLGGRNPYGSGAYSYNNAV 285

Query: 357 SSGSGPIFYLRSAASQQIGV--VQPGGDAPMVFNSVPVVHGKASAKRLRLFGVNLDCPTP 530
           +  SG +FYLR  A QQ+G+  VQ GG  PMVFNSVPVVHGKA+AKRLRLFGVN++CP  
Sbjct: 286 NPCSGSVFYLRPTAPQQVGMVQVQQGGVEPMVFNSVPVVHGKAAAKRLRLFGVNMECPIS 345

Query: 531 ENPEYQFLDSPTINH 575
           E+ E   L S +I H
Sbjct: 346 ESDECDILSSTSIPH 360


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