BLASTX nr result

ID: Coptis24_contig00027118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027118
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237045.1| uncharacterized protein LOC100526996 [Glycin...   102   3e-20
ref|XP_003530106.1| PREDICTED: uncharacterized protein LOC100816...   101   7e-20
ref|XP_002278380.1| PREDICTED: uncharacterized protein LOC100254...   100   2e-19
ref|XP_003546546.1| PREDICTED: uncharacterized protein LOC100785...    99   4e-19
emb|CBI20836.3| unnamed protein product [Vitis vinifera]               98   6e-19

>ref|NP_001237045.1| uncharacterized protein LOC100526996 [Glycine max]
           gi|255631332|gb|ACU16033.1| unknown [Glycine max]
          Length = 191

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/80 (61%), Positives = 64/80 (80%), Gaps = 6/80 (7%)
 Frame = -2

Query: 407 GGKGEEALNAHMNVCVKFNRLGRTHPILYQAEAMREILKK------RAKSISPKERVAVK 246
           GGK EEA++AHM+ CVKFN+ GR  P+L+QA+AM+E+LKK      RAKSISP+++   K
Sbjct: 107 GGKKEEAVSAHMSACVKFNKYGRAFPVLFQAQAMKEMLKKNTLDGRRAKSISPRDKGGAK 166

Query: 245 KGGIMRSSSCIPAITKDMTD 186
           KGGI RSSSCIPAIT+++ D
Sbjct: 167 KGGISRSSSCIPAITREIND 186


>ref|XP_003530106.1| PREDICTED: uncharacterized protein LOC100816162 [Glycine max]
          Length = 183

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/80 (60%), Positives = 64/80 (80%), Gaps = 6/80 (7%)
 Frame = -2

Query: 407 GGKGEEALNAHMNVCVKFNRLGRTHPILYQAEAMREILKK------RAKSISPKERVAVK 246
           GGK EEA++AHM+ CV+FN+ GR  P+L+QA+AM+E+LKK      RAKSISP+++   K
Sbjct: 99  GGKKEEAVSAHMSACVRFNKYGRAFPVLFQAQAMKEMLKKNTLDGRRAKSISPRDKGGAK 158

Query: 245 KGGIMRSSSCIPAITKDMTD 186
           KGGI RSSSCIPAIT+++ D
Sbjct: 159 KGGIARSSSCIPAITREIND 178


>ref|XP_002278380.1| PREDICTED: uncharacterized protein LOC100254824 [Vitis vinifera]
          Length = 192

 Score =  100 bits (248), Expect = 2e-19
 Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 10/86 (11%)
 Frame = -2

Query: 407 GGKGEEALNAHMNVCVKFNRLGRTHPILYQAEAMREILKK---------RAKSISPK-ER 258
           GGK EEAL+ HMN C +FN+LGR +P+L+QAEAMREILKK         R KSISP+ ++
Sbjct: 104 GGKKEEALSTHMNACSRFNKLGRAYPVLFQAEAMREILKKSTRLDGRGARGKSISPRIDK 163

Query: 257 VAVKKGGIMRSSSCIPAITKDMTDRT 180
              K GGI RSSSCIPAIT++M D T
Sbjct: 164 TGQKVGGIARSSSCIPAITREMNDLT 189


>ref|XP_003546546.1| PREDICTED: uncharacterized protein LOC100785884 [Glycine max]
          Length = 190

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 48/82 (58%), Positives = 63/82 (76%), Gaps = 6/82 (7%)
 Frame = -2

Query: 407 GGKGEEALNAHMNVCVKFNRLGRTHPILYQAEAMREILKK------RAKSISPKERVAVK 246
           GGK EEAL++HM+ CV+FN+ GR  P+L+QAEAM+E+LKK      RAKS +P+++   K
Sbjct: 106 GGKKEEALSSHMSACVRFNKYGRAFPVLFQAEAMKEMLKKNKMEGRRAKSFNPRDKGGQK 165

Query: 245 KGGIMRSSSCIPAITKDMTDRT 180
           KGGI RSSSCIPAIT++M   T
Sbjct: 166 KGGIARSSSCIPAITREMNGLT 187


>emb|CBI20836.3| unnamed protein product [Vitis vinifera]
          Length = 199

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/82 (62%), Positives = 62/82 (75%), Gaps = 9/82 (10%)
 Frame = -2

Query: 407 GGKGEEALNAHMNVCVKFNRLGRTHPILYQAEAMREILKK---------RAKSISPKERV 255
           G K EEA+N HM+ CV+FNR GRTHP+LYQAEAMRE+LK+         RAKS+SP+E  
Sbjct: 99  GWKIEEAVNEHMSACVRFNRFGRTHPVLYQAEAMREMLKRSSSMEGRASRAKSMSPRE-- 156

Query: 254 AVKKGGIMRSSSCIPAITKDMT 189
             KKGGI RSSSCIPAIT++ +
Sbjct: 157 --KKGGIARSSSCIPAITREFS 176


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