BLASTX nr result

ID: Coptis24_contig00027113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027113
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21105.3| unnamed protein product [Vitis vinifera]               61   2e-07

>emb|CBI21105.3| unnamed protein product [Vitis vinifera]
          Length = 1012

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 70/261 (26%), Positives = 97/261 (37%), Gaps = 17/261 (6%)
 Frame = +1

Query: 1   RNQMEMTASSFIYPYGRHVFSSMDSGIVREPVDFKTSNLRSCXXXXXXXXXXXXXXXXXX 180
           RNQME+ A  + +P   H   S   G+++EP+   T NL S                   
Sbjct: 33  RNQMEINAGRY-FPTIAHEQRSAALGMIQEPLFSNTLNLGSYRSGHAELGNSFLALLSGP 91

Query: 181 XXXXXXGTQXXXXXXXXXXXXKLPMQTSNVS-----------PVGFPSPQQGNHQIGTGS 327
                   Q            KLP+ +S+V+           P G  S   G  +  +G 
Sbjct: 92  PSLLQCDLQQLLNPKPICTSNKLPVYSSSVTVSTAGSGVPHAPTGSLSENLGYQKPRSGM 151

Query: 328 DHYLGVPSRAASTTIFNRSPDLQGSYQMANL-IRSSETDQAGPHPIVRGNEIGADLLYPV 504
           D    V S  A +T  + +  L  + Q ANL ++SS+  +A  H +V  NE   +     
Sbjct: 152 DFCPIVSSTTAVSTNCSSTSVLHDALQAANLNLQSSDLAKATIHHMVPRNEKVREFSSLK 211

Query: 505 QGWLSSSSSAV-----GRNIQASSNEPICTISAASDQASTFTKGRVLVFCLATXXXXXXX 669
            GW  ++ SA      G NI AS   P    S+  D  +TFT G   VFC  T       
Sbjct: 212 GGWPVNTGSANFGKLHGTNIHASQKRPSEASSSLCDHQATFTSGCPRVFCFGTSGDLLLS 271

Query: 670 XXXXXXXXXXXXXXQMSVSKF 732
                          MSVSKF
Sbjct: 272 NTGLLGVVCLCHCWHMSVSKF 292


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