BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027108
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533103.1| glycine-rich RNA-binding protein, putative [...    65   9e-09
ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein ...    64   2e-08
gb|ADE76094.1| unknown [Picea sitchensis]                              61   2e-07
ref|XP_002457031.1| hypothetical protein SORBIDRAFT_03g047450 [S...    61   2e-07
tpg|DAA55646.1| TPA: hypothetical protein ZEAMMB73_431003 [Zea m...    59   7e-07

>ref|XP_002533103.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
           gi|223527094|gb|EEF29275.1| glycine-rich RNA-binding
           protein, putative [Ricinus communis]
          Length = 78

 Score = 65.5 bits (158), Expect = 9e-09
 Identities = 30/42 (71%), Positives = 39/42 (92%)
 Frame = -2

Query: 672 SGKSKGFGFVQFTTESSAGKALQEMDGQLLDGRNIRVDYAKK 547
           +GKS+G+GFV+FT+ES+A KAL+EM+GQLLDGRNIRV YA +
Sbjct: 36  NGKSEGYGFVKFTSESAASKALKEMNGQLLDGRNIRVCYAHR 77


>ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|296084274|emb|CBI24662.3| unnamed
           protein product [Vitis vinifera]
          Length = 108

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/42 (73%), Positives = 35/42 (83%)
 Frame = -2

Query: 672 SGKSKGFGFVQFTTESSAGKALQEMDGQLLDGRNIRVDYAKK 547
           SGKSKG+GFVQFT++  A  AL+EMDGQ LDGRNIRV YA K
Sbjct: 66  SGKSKGYGFVQFTSDDDAHIALKEMDGQSLDGRNIRVTYAHK 107


>gb|ADE76094.1| unknown [Picea sitchensis]
          Length = 150

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/40 (72%), Positives = 34/40 (85%)
 Frame = -2

Query: 672 SGKSKGFGFVQFTTESSAGKALQEMDGQLLDGRNIRVDYA 553
           SG SKGFGFVQF +E+ A  AL+EMDGQ LDGRNIRV++A
Sbjct: 72  SGLSKGFGFVQFASETDAVNALKEMDGQSLDGRNIRVNFA 111


>ref|XP_002457031.1| hypothetical protein SORBIDRAFT_03g047450 [Sorghum bicolor]
           gi|241929006|gb|EES02151.1| hypothetical protein
           SORBIDRAFT_03g047450 [Sorghum bicolor]
          Length = 146

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 27/40 (67%), Positives = 36/40 (90%)
 Frame = -2

Query: 672 SGKSKGFGFVQFTTESSAGKALQEMDGQLLDGRNIRVDYA 553
           +GKSKGFGFV+F++E+ A  ALQ+++GQ+LDGRNIRV YA
Sbjct: 96  TGKSKGFGFVKFSSENQAAAALQKLNGQVLDGRNIRVHYA 135


>tpg|DAA55646.1| TPA: hypothetical protein ZEAMMB73_431003 [Zea mays]
          Length = 113

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 27/40 (67%), Positives = 35/40 (87%)
 Frame = -2

Query: 672 SGKSKGFGFVQFTTESSAGKALQEMDGQLLDGRNIRVDYA 553
           SGKSKGFGFV+F++++ A  ALQ+M+GQ+LDGR IRV YA
Sbjct: 70  SGKSKGFGFVKFSSQNQADAALQKMNGQVLDGRKIRVHYA 109