BLASTX nr result
ID: Coptis24_contig00027103
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027103 (352 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI15850.3| unnamed protein product [Vitis vinifera] 93 2e-17 ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth... 93 2e-17 emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera] 93 2e-17 ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidops... 86 2e-15 ref|XP_002881100.1| tRNA pseudouridine synthase family protein [... 86 2e-15 >emb|CBI15850.3| unnamed protein product [Vitis vinifera] Length = 495 Score = 93.2 bits (230), Expect = 2e-17 Identities = 45/60 (75%), Positives = 52/60 (86%) Frame = -3 Query: 182 DESIQEVTGDKWESFRKKKVVMRVGYVGTNYRGLQIQRDETSFTTVEAELEKAIFKAGGI 3 D+S+Q KWESFRKKKVVMRVGYVGTNYRGLQ+QRDE+S +T+E ELE A+FKAGGI Sbjct: 51 DQSVQ-----KWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGI 105 >ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis vinifera] Length = 564 Score = 93.2 bits (230), Expect = 2e-17 Identities = 45/60 (75%), Positives = 52/60 (86%) Frame = -3 Query: 182 DESIQEVTGDKWESFRKKKVVMRVGYVGTNYRGLQIQRDETSFTTVEAELEKAIFKAGGI 3 D+S+Q KWESFRKKKVVMRVGYVGTNYRGLQ+QRDE+S +T+E ELE A+FKAGGI Sbjct: 51 DQSVQ-----KWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGI 105 >emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera] Length = 602 Score = 93.2 bits (230), Expect = 2e-17 Identities = 45/60 (75%), Positives = 52/60 (86%) Frame = -3 Query: 182 DESIQEVTGDKWESFRKKKVVMRVGYVGTNYRGLQIQRDETSFTTVEAELEKAIFKAGGI 3 D+S+Q KWESFRKKKVVMRVGYVGTNYRGLQ+QRDE+S +T+E ELE A+FKAGGI Sbjct: 51 DQSVQ-----KWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGI 105 >ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidopsis thaliana] gi|3914486|sp|O22928.1|PUSH_ARATH RecName: Full=Putative tRNA pseudouridine synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase gi|2347206|gb|AAC16945.1| putative pseudouridine synthase [Arabidopsis thaliana] gi|330253276|gb|AEC08370.1| putative tRNA pseudouridine synthase [Arabidopsis thaliana] Length = 510 Score = 86.3 bits (212), Expect = 2e-15 Identities = 39/51 (76%), Positives = 46/51 (90%) Frame = -3 Query: 155 DKWESFRKKKVVMRVGYVGTNYRGLQIQRDETSFTTVEAELEKAIFKAGGI 3 DKWES+RKKKVV+R+GYVGT+YRGLQIQRD+ S T+E ELE AI+KAGGI Sbjct: 55 DKWESYRKKKVVIRIGYVGTDYRGLQIQRDDPSIKTIEGELEVAIYKAGGI 105 >ref|XP_002881100.1| tRNA pseudouridine synthase family protein [Arabidopsis lyrata subsp. lyrata] gi|297326939|gb|EFH57359.1| tRNA pseudouridine synthase family protein [Arabidopsis lyrata subsp. lyrata] Length = 507 Score = 86.3 bits (212), Expect = 2e-15 Identities = 39/51 (76%), Positives = 46/51 (90%) Frame = -3 Query: 155 DKWESFRKKKVVMRVGYVGTNYRGLQIQRDETSFTTVEAELEKAIFKAGGI 3 DKWES+RKKKVV+R+GYVGT+YRGLQIQRD+ S T+E ELE AI+KAGGI Sbjct: 55 DKWESYRKKKVVIRIGYVGTDYRGLQIQRDDPSLKTIEGELEVAIYKAGGI 105