BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027103
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15850.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...    93   2e-17
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]    93   2e-17
ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidops...    86   2e-15
ref|XP_002881100.1| tRNA pseudouridine synthase family protein [...    86   2e-15

>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/60 (75%), Positives = 52/60 (86%)
 Frame = -3

Query: 182 DESIQEVTGDKWESFRKKKVVMRVGYVGTNYRGLQIQRDETSFTTVEAELEKAIFKAGGI 3
           D+S+Q     KWESFRKKKVVMRVGYVGTNYRGLQ+QRDE+S +T+E ELE A+FKAGGI
Sbjct: 51  DQSVQ-----KWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGI 105


>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis
           vinifera]
          Length = 564

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/60 (75%), Positives = 52/60 (86%)
 Frame = -3

Query: 182 DESIQEVTGDKWESFRKKKVVMRVGYVGTNYRGLQIQRDETSFTTVEAELEKAIFKAGGI 3
           D+S+Q     KWESFRKKKVVMRVGYVGTNYRGLQ+QRDE+S +T+E ELE A+FKAGGI
Sbjct: 51  DQSVQ-----KWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGI 105


>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 45/60 (75%), Positives = 52/60 (86%)
 Frame = -3

Query: 182 DESIQEVTGDKWESFRKKKVVMRVGYVGTNYRGLQIQRDETSFTTVEAELEKAIFKAGGI 3
           D+S+Q     KWESFRKKKVVMRVGYVGTNYRGLQ+QRDE+S +T+E ELE A+FKAGGI
Sbjct: 51  DQSVQ-----KWESFRKKKVVMRVGYVGTNYRGLQMQRDESSLSTIEGELETAVFKAGGI 105


>ref|NP_180591.1| putative tRNA pseudouridine synthase [Arabidopsis thaliana]
           gi|3914486|sp|O22928.1|PUSH_ARATH RecName: Full=Putative
           tRNA pseudouridine synthase; AltName: Full=tRNA
           pseudouridylate synthase; AltName: Full=tRNA-uridine
           isomerase gi|2347206|gb|AAC16945.1| putative
           pseudouridine synthase [Arabidopsis thaliana]
           gi|330253276|gb|AEC08370.1| putative tRNA pseudouridine
           synthase [Arabidopsis thaliana]
          Length = 510

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/51 (76%), Positives = 46/51 (90%)
 Frame = -3

Query: 155 DKWESFRKKKVVMRVGYVGTNYRGLQIQRDETSFTTVEAELEKAIFKAGGI 3
           DKWES+RKKKVV+R+GYVGT+YRGLQIQRD+ S  T+E ELE AI+KAGGI
Sbjct: 55  DKWESYRKKKVVIRIGYVGTDYRGLQIQRDDPSIKTIEGELEVAIYKAGGI 105


>ref|XP_002881100.1| tRNA pseudouridine synthase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297326939|gb|EFH57359.1| tRNA
           pseudouridine synthase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 507

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/51 (76%), Positives = 46/51 (90%)
 Frame = -3

Query: 155 DKWESFRKKKVVMRVGYVGTNYRGLQIQRDETSFTTVEAELEKAIFKAGGI 3
           DKWES+RKKKVV+R+GYVGT+YRGLQIQRD+ S  T+E ELE AI+KAGGI
Sbjct: 55  DKWESYRKKKVVIRIGYVGTDYRGLQIQRDDPSLKTIEGELEVAIYKAGGI 105