BLASTX nr result

ID: Coptis24_contig00027095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027095
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_566278.1| protein FAR1-related sequence 7 [Arabidopsis th...    61   8e-08
ref|XP_002526081.1| conserved hypothetical protein [Ricinus comm...    60   1e-07
ref|XP_002273512.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    60   2e-07
ref|XP_004134160.1| PREDICTED: protein FAR1-RELATED SEQUENCE 7-l...    60   2e-07
ref|NP_197397.1| protein FAR1-related sequence 12 [Arabidopsis t...    60   2e-07

>ref|NP_566278.1| protein FAR1-related sequence 7 [Arabidopsis thaliana]
           gi|75186401|sp|Q9M8J3.1|FRS7_ARATH RecName: Full=Protein
           FAR1-RELATED SEQUENCE 7
           gi|6862929|gb|AAF30318.1|AC018907_18 unknown protein
           [Arabidopsis thaliana]
           gi|13430716|gb|AAK25980.1|AF360270_1 unknown protein
           [Arabidopsis thaliana] gi|23297525|gb|AAN12887.1|
           unknown protein [Arabidopsis thaliana]
           gi|332640844|gb|AEE74365.1| protein FAR1-related
           sequence 7 [Arabidopsis thaliana]
          Length = 764

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
 Frame = +2

Query: 149 INTSEGIQMLEN---LEPFVGQEFESEQKARSFYNGYARYSGFSIRKGPLYXXXXXXXXX 319
           + T+ GI   E    LEP+VG EF++ ++AR +YN YA  +GF +R G LY         
Sbjct: 11  VGTNNGIAENEGDSGLEPYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVS 70

Query: 320 XXXFVCSREGFR 355
              FVCS+EGF+
Sbjct: 71  SRRFVCSKEGFQ 82


>ref|XP_002526081.1| conserved hypothetical protein [Ricinus communis]
           gi|223534578|gb|EEF36275.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 267

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/59 (49%), Positives = 34/59 (57%)
 Frame = +2

Query: 185 LEPFVGQEFESEQKARSFYNGYARYSGFSIRKGPLYXXXXXXXXXXXXFVCSREGFRRE 361
           +EP +G EF SE  AR+FYN YA+  GFSIR    Y            F CS+EGFRRE
Sbjct: 61  MEPALGMEFASEDDARNFYNSYAKQMGFSIRVNTYYRSKKDNSIISREFCCSKEGFRRE 119


>ref|XP_002273512.2| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 759

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/60 (53%), Positives = 33/60 (55%)
 Frame = +2

Query: 182 NLEPFVGQEFESEQKARSFYNGYARYSGFSIRKGPLYXXXXXXXXXXXXFVCSREGFRRE 361
           NLEP  G EF+SEQ AR FYN YAR  GFS R                  VCSREGFRRE
Sbjct: 60  NLEPSEGMEFDSEQAARIFYNSYARRIGFSTRVSVYQRSRRDGSIICRQIVCSREGFRRE 119


>ref|XP_004134160.1| PREDICTED: protein FAR1-RELATED SEQUENCE 7-like [Cucumis sativus]
           gi|449521221|ref|XP_004167628.1| PREDICTED: protein
           FAR1-RELATED SEQUENCE 7-like [Cucumis sativus]
          Length = 761

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/57 (49%), Positives = 35/57 (61%)
 Frame = +2

Query: 185 LEPFVGQEFESEQKARSFYNGYARYSGFSIRKGPLYXXXXXXXXXXXXFVCSREGFR 355
           LEPFVGQEF+S   A +FY  YA+ +GF +R G LY            FVCS+EGF+
Sbjct: 27  LEPFVGQEFDSADAALNFYTSYAQRAGFKVRIGQLYRSRTDGAVTSRRFVCSKEGFQ 83


>ref|NP_197397.1| protein FAR1-related sequence 12 [Arabidopsis thaliana]
           gi|122213828|sp|Q3E7I5.1|FRS12_ARATH RecName:
           Full=Protein FAR1-RELATED SEQUENCE 12
           gi|332005250|gb|AED92633.1| protein FAR1-related
           sequence 12 [Arabidopsis thaliana]
          Length = 788

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/57 (45%), Positives = 36/57 (63%)
 Frame = +2

Query: 185 LEPFVGQEFESEQKARSFYNGYARYSGFSIRKGPLYXXXXXXXXXXXXFVCSREGFR 355
           +EP+VG EF++ ++AR FYN YA  +GF +R G LY            FVCS+EGF+
Sbjct: 41  VEPYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQ 97


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