BLASTX nr result

ID: Coptis24_contig00027086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027086
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528831.1| protein phosphatase 2c, putative [Ricinus co...   116   2e-24
ref|XP_002315569.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_002312585.1| predicted protein [Populus trichocarpa] gi|2...   104   7e-21
ref|XP_003596468.1| hypothetical protein MTR_2g077900 [Medicago ...   103   1e-20
gb|AFK40469.1| unknown [Medicago truncatula]                          103   1e-20

>ref|XP_002528831.1| protein phosphatase 2c, putative [Ricinus communis]
           gi|223531743|gb|EEF33565.1| protein phosphatase 2c,
           putative [Ricinus communis]
          Length = 282

 Score =  116 bits (291), Expect = 2e-24
 Identities = 61/112 (54%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
 Frame = -2

Query: 521 VADQICEKHHPRIKRRWSMNLFSGTLHMRIRTAG-SNPSKRSEPVVAVEKIDSDTEFVIL 345
           VA Q+  KH    KR WS  LF G L ++   AG S  SK SE V+  EKIDSDTEFVI+
Sbjct: 171 VAHQVRSKHQETTKRHWSRRLFPGMLALKFSKAGGSKESKGSELVIGAEKIDSDTEFVII 230

Query: 344 ASNGIWQVMNNQEAVNLVRHINHPQXXXXXXXXXXXARMSKGNISCLIIRFD 189
           AS GIW+VM NQEAVNL+RH++ PQ            RM+K N SC+IIRFD
Sbjct: 231 ASTGIWEVMKNQEAVNLIRHMDDPQAAAECLSKEALTRMTKSNSSCVIIRFD 282


>ref|XP_002315569.1| predicted protein [Populus trichocarpa] gi|222864609|gb|EEF01740.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  104 bits (260), Expect = 7e-21
 Identities = 56/110 (50%), Positives = 66/110 (60%)
 Frame = -2

Query: 521 VADQICEKHHPRIKRRWSMNLFSGTLHMRIRTAGSNPSKRSEPVVAVEKIDSDTEFVILA 342
           VA Q+  KH    KR WS  L SG  H  + T     SK SE +V  E+IDSDTEFVI+ 
Sbjct: 160 VAHQMKSKHQRTAKRLWSHRLLSGMEHALLYT---KQSKGSELLVGAERIDSDTEFVIIG 216

Query: 341 SNGIWQVMNNQEAVNLVRHINHPQXXXXXXXXXXXARMSKGNISCLIIRF 192
           S GIW+ MNNQEAVNL+ H+  PQ            RMSK NISC++IRF
Sbjct: 217 STGIWEAMNNQEAVNLIGHLEDPQEAAECLAKEALTRMSKSNISCIVIRF 266


>ref|XP_002312585.1| predicted protein [Populus trichocarpa] gi|222852405|gb|EEE89952.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score =  104 bits (260), Expect = 7e-21
 Identities = 56/113 (49%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
 Frame = -2

Query: 521 VADQICEKHHPRIKRRWSMNLFSGTL--HMRIRTAGSNPSKRSEPVVAVEKIDSDTEFVI 348
           VA Q+  KH     R WS  LFSG +        A +  SK SE  V  E+IDSDTEFVI
Sbjct: 170 VAHQMKSKHQQTATRHWSHRLFSGRMLSWKSSDAASTKKSKGSELAVGAERIDSDTEFVI 229

Query: 347 LASNGIWQVMNNQEAVNLVRHINHPQXXXXXXXXXXXARMSKGNISCLIIRFD 189
           +AS GIW+ MNNQEAV+L+ H+  PQ            RMSK NISC++IRFD
Sbjct: 230 IASTGIWETMNNQEAVHLIGHLEDPQEAAECLAKEALTRMSKSNISCIVIRFD 282


>ref|XP_003596468.1| hypothetical protein MTR_2g077900 [Medicago truncatula]
           gi|355485516|gb|AES66719.1| hypothetical protein
           MTR_2g077900 [Medicago truncatula]
          Length = 274

 Score =  103 bits (258), Expect = 1e-20
 Identities = 59/111 (53%), Positives = 66/111 (59%)
 Frame = -2

Query: 521 VADQICEKHHPRIKRRWSMNLFSGTLHMRIRTAGSNPSKRSEPVVAVEKIDSDTEFVILA 342
           VA Q   KH+   K+ W   LFSG         G+  SK SE VV    IDS TEFVILA
Sbjct: 170 VAYQTIGKHNQSSKKHWFHRLFSGN------ATGTKASKASELVVGSYWIDSSTEFVILA 223

Query: 341 SNGIWQVMNNQEAVNLVRHINHPQXXXXXXXXXXXARMSKGNISCLIIRFD 189
           SNGIW+VM NQEAVNL+RHI  PQ            RMS+ +ISCLIIRFD
Sbjct: 224 SNGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEALVRMSRSHISCLIIRFD 274


>gb|AFK40469.1| unknown [Medicago truncatula]
          Length = 274

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/111 (50%), Positives = 65/111 (58%)
 Frame = -2

Query: 521 VADQICEKHHPRIKRRWSMNLFSGTLHMRIRTAGSNPSKRSEPVVAVEKIDSDTEFVILA 342
           +A Q  + +    KR WS  +FSG          +  S  SE V+  E IDSDTEF+ILA
Sbjct: 170 MAHQKTDTYQQSAKRHWSRRIFSGN------AVANRQSSSSELVIRSESIDSDTEFLILA 223

Query: 341 SNGIWQVMNNQEAVNLVRHINHPQXXXXXXXXXXXARMSKGNISCLIIRFD 189
           SNGIW+VM NQEAVNL+ HI  PQ            RMSK NISCLIIRFD
Sbjct: 224 SNGIWEVMKNQEAVNLISHIEDPQEAAECLANEALNRMSKSNISCLIIRFD 274


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