BLASTX nr result
ID: Coptis24_contig00027077
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00027077 (387 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica... 74 9e-12 gb|ABN08796.1| Ribonuclease H [Medicago truncatula] 74 9e-12 gb|ABD28730.1| Ribonuclease H [Medicago truncatula] 72 4e-11 ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g... 69 5e-10 gb|ABN08954.1| Ribonuclease H [Medicago truncatula] 68 9e-10 >ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula] gi|355496705|gb|AES77908.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula] Length = 666 Score = 74.3 bits (181), Expect = 9e-12 Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 3/124 (2%) Frame = -2 Query: 386 GICCRDSEGEFIFTFCKRLTNGTSDRAEAHAVVEGVEMATNRGFYHLWVESDSLSTVTSF 207 GI RDS F+ + N T AE A + +E A H+ +E+DSL V +F Sbjct: 242 GIVIRDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHVCLETDSLKVVNAF 301 Query: 206 NSG-DIPWELYLRWKRCMQKITSFRCT--HIWREANISADTLAKAGAALQIEDSMVFVGK 36 N G +PW++ RW+ C S C+ HI RE N+ AD LAK G L + + ++ Sbjct: 302 NKGLGVPWQMRARWQNCWDFCDSISCSCVHILREGNMVADALAKHGQGLSLYYTQLWTSP 361 Query: 35 PNWL 24 P ++ Sbjct: 362 PPFI 365 >gb|ABN08796.1| Ribonuclease H [Medicago truncatula] Length = 221 Score = 74.3 bits (181), Expect = 9e-12 Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 3/124 (2%) Frame = -2 Query: 386 GICCRDSEGEFIFTFCKRLTNGTSDRAEAHAVVEGVEMATNRGFYHLWVESDSLSTVTSF 207 GI RDS F+ + N T AE A + +E A H+ +E+DSL V +F Sbjct: 79 GIVIRDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHVCLETDSLKVVNAF 138 Query: 206 NSG-DIPWELYLRWKRCMQKITSFRCT--HIWREANISADTLAKAGAALQIEDSMVFVGK 36 N G +PW++ RW+ C S C+ HI RE N+ AD LAK G L + + ++ Sbjct: 139 NKGLGVPWQMRARWQNCWDFCDSISCSCVHILREGNMVADALAKHGQGLSLYYTQLWTSP 198 Query: 35 PNWL 24 P ++ Sbjct: 199 PPFI 202 >gb|ABD28730.1| Ribonuclease H [Medicago truncatula] Length = 409 Score = 72.4 bits (176), Expect = 4e-11 Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 4/115 (3%) Frame = -2 Query: 386 GICCRDSEGEFIFTFCKRLTNGTSDRAEAHAVVEGVEMATNRGFYHLWVESDSLSTVTS- 210 G+ R S+ F F + + T+ AE A + +E A ++W+E+DS++ + + Sbjct: 271 GVIFRASQTMFCGAFAQNIGYATALEAEYSACMFAIEKAKELHLTNIWIETDSVNVIRAF 330 Query: 209 -FNSGDIPWELYLRWKRCMQKITSFR--CTHIWREANISADTLAKAGAALQIEDS 54 FN+G +PW++++RW C+ S R CTH+ RE N+ AD LAK G L + S Sbjct: 331 HFNTG-VPWKMHIRWHNCLLFCRSIRSLCTHVNREGNLVADALAKNGQGLALYSS 384 >ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] gi|355506707|gb|AES87849.1| GDSL esterase/lipase [Medicago truncatula] Length = 1004 Score = 68.6 bits (166), Expect = 5e-10 Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 3/120 (2%) Frame = -2 Query: 374 RDSEGEFIFTFCKRLTNGTSDRAEAHAVVEGVEMATNRGFYHLWVESDSLSTVTSFNS-G 198 RD F+ F K L G++ + E A++ VE+A R + ++W+ESDS V +F Sbjct: 253 RDQNANFLSCFAKNLGGGSAYQPELAAIMRVVEIAYQRNWRNIWIESDSALVVMAFKKMS 312 Query: 197 DIPWELYLRWKRCMQKI--TSFRCTHIWREANISADTLAKAGAALQIEDSMVFVGKPNWL 24 IP L RW C + + +F THI+RE N AD LA G L IE +++ P+++ Sbjct: 313 MIPCRLRNRWINCRKLLCRMNFVITHIYREDNRCADKLASKG--LDIEGVTIWLNMPDFI 370 >gb|ABN08954.1| Ribonuclease H [Medicago truncatula] Length = 175 Score = 67.8 bits (164), Expect = 9e-10 Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%) Frame = -2 Query: 344 FCKRLTNGTSDRAEAHAVVEGVEMATNRGFYHLWVESDSLSTVTSFNSGD-IPWELYLRW 168 F + + + T +AE A + +E + +W+E+DS V +F+S + +PW+L RW Sbjct: 43 FAQNIGHATCFKAELCAAIFAIEKSIEYNLRDIWLETDSKLVVKAFSSSEHVPWQLRTRW 102 Query: 167 KRCM---QKITSFRCTHIWREANISADTLAKAGAALQIEDSMVFVGKP 33 C+ QKI CTHI RE N AD+LAK G +L + S + P Sbjct: 103 NNCLALAQKIKCV-CTHIHREGNAGADSLAKNGKSLALLTSQWWSSSP 149