BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027077
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    74   9e-12
gb|ABN08796.1| Ribonuclease H [Medicago truncatula]                    74   9e-12
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    72   4e-11
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    69   5e-10
gb|ABN08954.1| Ribonuclease H [Medicago truncatula]                    68   9e-10

>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
 Frame = -2

Query: 386 GICCRDSEGEFIFTFCKRLTNGTSDRAEAHAVVEGVEMATNRGFYHLWVESDSLSTVTSF 207
           GI  RDS   F+      + N T   AE  A +  +E A      H+ +E+DSL  V +F
Sbjct: 242 GIVIRDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHVCLETDSLKVVNAF 301

Query: 206 NSG-DIPWELYLRWKRCMQKITSFRCT--HIWREANISADTLAKAGAALQIEDSMVFVGK 36
           N G  +PW++  RW+ C     S  C+  HI RE N+ AD LAK G  L +  + ++   
Sbjct: 302 NKGLGVPWQMRARWQNCWDFCDSISCSCVHILREGNMVADALAKHGQGLSLYYTQLWTSP 361

Query: 35  PNWL 24
           P ++
Sbjct: 362 PPFI 365


>gb|ABN08796.1| Ribonuclease H [Medicago truncatula]
          Length = 221

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
 Frame = -2

Query: 386 GICCRDSEGEFIFTFCKRLTNGTSDRAEAHAVVEGVEMATNRGFYHLWVESDSLSTVTSF 207
           GI  RDS   F+      + N T   AE  A +  +E A      H+ +E+DSL  V +F
Sbjct: 79  GIVIRDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHVCLETDSLKVVNAF 138

Query: 206 NSG-DIPWELYLRWKRCMQKITSFRCT--HIWREANISADTLAKAGAALQIEDSMVFVGK 36
           N G  +PW++  RW+ C     S  C+  HI RE N+ AD LAK G  L +  + ++   
Sbjct: 139 NKGLGVPWQMRARWQNCWDFCDSISCSCVHILREGNMVADALAKHGQGLSLYYTQLWTSP 198

Query: 35  PNWL 24
           P ++
Sbjct: 199 PPFI 202


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 39/115 (33%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
 Frame = -2

Query: 386 GICCRDSEGEFIFTFCKRLTNGTSDRAEAHAVVEGVEMATNRGFYHLWVESDSLSTVTS- 210
           G+  R S+  F   F + +   T+  AE  A +  +E A      ++W+E+DS++ + + 
Sbjct: 271 GVIFRASQTMFCGAFAQNIGYATALEAEYSACMFAIEKAKELHLTNIWIETDSVNVIRAF 330

Query: 209 -FNSGDIPWELYLRWKRCMQKITSFR--CTHIWREANISADTLAKAGAALQIEDS 54
            FN+G +PW++++RW  C+    S R  CTH+ RE N+ AD LAK G  L +  S
Sbjct: 331 HFNTG-VPWKMHIRWHNCLLFCRSIRSLCTHVNREGNLVADALAKNGQGLALYSS 384


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
 Frame = -2

Query: 374 RDSEGEFIFTFCKRLTNGTSDRAEAHAVVEGVEMATNRGFYHLWVESDSLSTVTSFNS-G 198
           RD    F+  F K L  G++ + E  A++  VE+A  R + ++W+ESDS   V +F    
Sbjct: 253 RDQNANFLSCFAKNLGGGSAYQPELAAIMRVVEIAYQRNWRNIWIESDSALVVMAFKKMS 312

Query: 197 DIPWELYLRWKRCMQKI--TSFRCTHIWREANISADTLAKAGAALQIEDSMVFVGKPNWL 24
            IP  L  RW  C + +   +F  THI+RE N  AD LA  G  L IE   +++  P+++
Sbjct: 313 MIPCRLRNRWINCRKLLCRMNFVITHIYREDNRCADKLASKG--LDIEGVTIWLNMPDFI 370


>gb|ABN08954.1| Ribonuclease H [Medicago truncatula]
          Length = 175

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
 Frame = -2

Query: 344 FCKRLTNGTSDRAEAHAVVEGVEMATNRGFYHLWVESDSLSTVTSFNSGD-IPWELYLRW 168
           F + + + T  +AE  A +  +E +       +W+E+DS   V +F+S + +PW+L  RW
Sbjct: 43  FAQNIGHATCFKAELCAAIFAIEKSIEYNLRDIWLETDSKLVVKAFSSSEHVPWQLRTRW 102

Query: 167 KRCM---QKITSFRCTHIWREANISADTLAKAGAALQIEDSMVFVGKP 33
             C+   QKI    CTHI RE N  AD+LAK G +L +  S  +   P
Sbjct: 103 NNCLALAQKIKCV-CTHIHREGNAGADSLAKNGKSLALLTSQWWSSSP 149