BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027076
         (1243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...   541   e-151
ref|XP_002514062.1| replication factor A 1, rfa1, putative [Rici...   527   e-147
gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]                      524   e-146
ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-...   522   e-146
ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-...   518   e-145

>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
            vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
            product [Vitis vinifera]
          Length = 622

 Score =  541 bits (1394), Expect = e-151
 Identities = 257/328 (78%), Positives = 296/328 (90%)
 Frame = -3

Query: 1241 QFSFRPISDIENTENNSILDIIGVVTSVNPSVSIMRKNGMETQRRVLNLKDQSGRSVELT 1062
            QFSFRPIS+IEN ENNSILD+IG+V SVNPSV I+RKNGMETQRR++NLKD SGRS+ELT
Sbjct: 295  QFSFRPISEIENVENNSILDVIGIVISVNPSVPILRKNGMETQRRIVNLKDGSGRSIELT 354

Query: 1061 LWGEFCNREGRELQEMVDSGLSPVLAVKAGKVSDFSGKSVGTISSSQLFINPDFPEAYSL 882
            +WGEFCNREG +LQEM+DSG  PVLAVK+GKV+DFSGKSVGTIS++QLFINPDF EA +L
Sbjct: 355  MWGEFCNREGHQLQEMIDSGSFPVLAVKSGKVNDFSGKSVGTISATQLFINPDFTEACNL 414

Query: 881  RDWFDRGGKDVAFLSISRDFAPGAQRNEIRKTVSQIKAEGLGRADKPDWVTVKASVSFVK 702
            R+WFDRGGK+ A  SISRD  P   RNEIRKTVSQIK EGLGR+DKPDWVTVKA++SF+K
Sbjct: 415  REWFDRGGKNAASQSISRDIMPAGSRNEIRKTVSQIKDEGLGRSDKPDWVTVKATISFIK 474

Query: 701  TDNFCYTACPLMIGDRQCSKKVVKSGETKWQCERCNQDFEECDYRYLIQAAVQDHTGLTW 522
            TD FCY ACPLMIGDRQC+KKV +SG T+WQC+RCNQ+FE+CDYRYL+QA VQDHTGLTW
Sbjct: 475  TDTFCYAACPLMIGDRQCNKKVTRSGNTRWQCDRCNQEFEDCDYRYLLQAQVQDHTGLTW 534

Query: 521  VTAFQESGEEILGCSAKELYSLKYEEQDDVRFEEIIRSSLFNQFLLKLKIKEEMYGDEQK 342
            VTAFQE+GEEILGCSAKELY LKYEE+DD RF EIIRS L NQFL +LKIKEEMYG+EQ+
Sbjct: 535  VTAFQEAGEEILGCSAKELYLLKYEEEDDFRFGEIIRSRLLNQFLFRLKIKEEMYGEEQR 594

Query: 341  VKITVVKAEKVDPSSESRYLLDII*RSP 258
            VKITVVKA+KV+ +SESR+LLD+I + P
Sbjct: 595  VKITVVKADKVNYTSESRHLLDLISKCP 622


>ref|XP_002514062.1| replication factor A 1, rfa1, putative [Ricinus communis]
            gi|223546518|gb|EEF48016.1| replication factor A 1, rfa1,
            putative [Ricinus communis]
          Length = 670

 Score =  527 bits (1358), Expect = e-147
 Identities = 249/328 (75%), Positives = 290/328 (88%)
 Frame = -3

Query: 1241 QFSFRPISDIENTENNSILDIIGVVTSVNPSVSIMRKNGMETQRRVLNLKDQSGRSVELT 1062
            QF+F+ IS+IEN ENNSILD+IG+V SVNPSV I+RKNGMETQRR+LNLKD SGR++ELT
Sbjct: 341  QFTFKTISEIENVENNSILDVIGIVISVNPSVPILRKNGMETQRRILNLKDGSGRNIELT 400

Query: 1061 LWGEFCNREGRELQEMVDSGLSPVLAVKAGKVSDFSGKSVGTISSSQLFINPDFPEAYSL 882
            LWG+FCN+EG++LQE+VDSG  PVLAVKAGKVSDFSGKS+GTISS+QLFINPD PEA+ L
Sbjct: 401  LWGDFCNKEGQQLQEIVDSGDFPVLAVKAGKVSDFSGKSLGTISSTQLFINPDIPEAHGL 460

Query: 881  RDWFDRGGKDVAFLSISRDFAPGAQRNEIRKTVSQIKAEGLGRADKPDWVTVKASVSFVK 702
            +DWFDRGG+  A +SISRD  PG  +NEIRKTVSQIK EGLGR+D+PDWVTV A ++FVK
Sbjct: 461  KDWFDRGGQHTASVSISRDILPGGSKNEIRKTVSQIKHEGLGRSDRPDWVTVSARITFVK 520

Query: 701  TDNFCYTACPLMIGDRQCSKKVVKSGETKWQCERCNQDFEECDYRYLIQAAVQDHTGLTW 522
            TD FCYTACPLMIGDRQC+KKV  SG ++WQC+RCNQ+F+ECDYRYL+Q  +QDHTGLTW
Sbjct: 521  TDTFCYTACPLMIGDRQCNKKVTSSGNSRWQCDRCNQEFDECDYRYLLQVQIQDHTGLTW 580

Query: 521  VTAFQESGEEILGCSAKELYSLKYEEQDDVRFEEIIRSSLFNQFLLKLKIKEEMYGDEQK 342
            VTAFQESGEEILG  AKELY LKYE QDD +F ++IRS LF QFL +LKIKEEMYGDEQ+
Sbjct: 581  VTAFQESGEEILGLPAKELYQLKYEMQDDTKFSDVIRSRLFQQFLFRLKIKEEMYGDEQR 640

Query: 341  VKITVVKAEKVDPSSESRYLLDII*RSP 258
            VKITVVKAEKV+ SSE RYLLD+I + P
Sbjct: 641  VKITVVKAEKVNYSSEGRYLLDLISQCP 668


>gb|AAQ23194.1| RPA 70kDa subunit [Pisum sativum]
          Length = 637

 Score =  524 bits (1350), Expect = e-146
 Identities = 244/324 (75%), Positives = 295/324 (91%)
 Frame = -3

Query: 1241 QFSFRPISDIENTENNSILDIIGVVTSVNPSVSIMRKNGMETQRRVLNLKDQSGRSVELT 1062
            QFSFRPISDIEN E+N+ILD+IGVVTSVNPSV I+RKNGMET RR+LNLKD SGRSVELT
Sbjct: 308  QFSFRPISDIENVESNAILDVIGVVTSVNPSVPILRKNGMETLRRILNLKDNSGRSVELT 367

Query: 1061 LWGEFCNREGRELQEMVDSGLSPVLAVKAGKVSDFSGKSVGTISSSQLFINPDFPEAYSL 882
            LWGEFCNREG++LQEMVD+G+ P+LAVKAGKV++FSGKS+G+IS++QLFINPDFPEA SL
Sbjct: 368  LWGEFCNREGQKLQEMVDAGVFPILAVKAGKVNEFSGKSIGSISTTQLFINPDFPEAQSL 427

Query: 881  RDWFDRGGKDVAFLSISRDFAPGAQRNEIRKTVSQIKAEGLGRADKPDWVTVKASVSFVK 702
            R WFD+ GKD A LSIS+D   G  +NEIRKTVSQI+ EGLGR+DKPDW+T++A++SF+K
Sbjct: 428  RAWFDQVGKDSASLSISKDITHGGPKNEIRKTVSQIRDEGLGRSDKPDWITIRATISFMK 487

Query: 701  TDNFCYTACPLMIGDRQCSKKVVKSGETKWQCERCNQDFEECDYRYLIQAAVQDHTGLTW 522
            TD FCYTACPLMIGDRQC+KKV +SG+T+WQC+RCNQ+FEECDYRYL+QA +QDHTGLTW
Sbjct: 488  TDTFCYTACPLMIGDRQCNKKVTRSGDTRWQCDRCNQEFEECDYRYLLQAQIQDHTGLTW 547

Query: 521  VTAFQESGEEILGCSAKELYSLKYEEQDDVRFEEIIRSSLFNQFLLKLKIKEEMYGDEQK 342
            VTAFQE GEEI+G  AKELY+LKYE++DD RF +I++S LFN F+ +LKIKEE+YG+EQK
Sbjct: 548  VTAFQEGGEEIMGYPAKELYALKYEQEDDERFGDIVKSRLFNHFVFRLKIKEELYGEEQK 607

Query: 341  VKITVVKAEKVDPSSESRYLLDII 270
            VK TVVKA+KV+ S+ESRY+LD+I
Sbjct: 608  VKSTVVKADKVNYSAESRYMLDLI 631


>ref|XP_004157962.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Cucumis sativus]
          Length = 623

 Score =  522 bits (1345), Expect = e-146
 Identities = 240/324 (74%), Positives = 296/324 (91%)
 Frame = -3

Query: 1241 QFSFRPISDIENTENNSILDIIGVVTSVNPSVSIMRKNGMETQRRVLNLKDQSGRSVELT 1062
            QFSF+PIS+IEN E NSILD+IG+VTS+NPS+ ++RKNGMETQRRV+ LKD SGRSVELT
Sbjct: 295  QFSFKPISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELT 354

Query: 1061 LWGEFCNREGRELQEMVDSGLSPVLAVKAGKVSDFSGKSVGTISSSQLFINPDFPEAYSL 882
            +WG+FCN+EG++LQE++ SGLSPVLAVK+GKVSDF+GKS+GTISS+QLFINPD PEA+ L
Sbjct: 355  MWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHIL 414

Query: 881  RDWFDRGGKDVAFLSISRDFAPGAQRNEIRKTVSQIKAEGLGRADKPDWVTVKASVSFVK 702
            R+W+D GGK+   LSIS++  PG+ +N+IRKTVSQIK EGLGRADKPDW+TVKA++SF+K
Sbjct: 415  REWYDGGGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIK 474

Query: 701  TDNFCYTACPLMIGDRQCSKKVVKSGETKWQCERCNQDFEECDYRYLIQAAVQDHTGLTW 522
            TD+FCYTACPLMIGDRQC+KKV +SG +KW C+RCNQ+FE+CDYRYL+QA +QDHTGLTW
Sbjct: 475  TDSFCYTACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTW 534

Query: 521  VTAFQESGEEILGCSAKELYSLKYEEQDDVRFEEIIRSSLFNQFLLKLKIKEEMYGDEQK 342
            VTAFQE+GEEILG S KELY LKYEEQDDV+F EIIRS +F+QFL +LKIKEE+YGDEQ+
Sbjct: 535  VTAFQETGEEILGVSGKELYMLKYEEQDDVKFGEIIRSKIFDQFLFRLKIKEEVYGDEQR 594

Query: 341  VKITVVKAEKVDPSSESRYLLDII 270
            VK TVVKA++V+ SSES+Y+LD++
Sbjct: 595  VKNTVVKADRVNYSSESKYMLDLL 618


>ref|XP_004141065.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Cucumis sativus]
          Length = 694

 Score =  518 bits (1335), Expect = e-145
 Identities = 239/320 (74%), Positives = 293/320 (91%)
 Frame = -3

Query: 1241 QFSFRPISDIENTENNSILDIIGVVTSVNPSVSIMRKNGMETQRRVLNLKDQSGRSVELT 1062
            QFSF+PIS+IEN E NSILD+IG+VTS+NPS+ ++RKNGMETQRRV+ LKD SGRSVELT
Sbjct: 295  QFSFKPISEIENAETNSILDVIGIVTSINPSIPVLRKNGMETQRRVVYLKDASGRSVELT 354

Query: 1061 LWGEFCNREGRELQEMVDSGLSPVLAVKAGKVSDFSGKSVGTISSSQLFINPDFPEAYSL 882
            +WG+FCN+EG++LQE++ SGLSPVLAVK+GKVSDF+GKS+GTISS+QLFINPD PEA+ L
Sbjct: 355  MWGDFCNKEGQKLQEIIYSGLSPVLAVKSGKVSDFTGKSIGTISSTQLFINPDLPEAHIL 414

Query: 881  RDWFDRGGKDVAFLSISRDFAPGAQRNEIRKTVSQIKAEGLGRADKPDWVTVKASVSFVK 702
            R+W+D GGK+   LSIS++  PG+ +N+IRKTVSQIK EGLGRADKPDW+TVKA++SF+K
Sbjct: 415  REWYDGGGKNTTSLSISKEIVPGSAKNDIRKTVSQIKDEGLGRADKPDWITVKATISFIK 474

Query: 701  TDNFCYTACPLMIGDRQCSKKVVKSGETKWQCERCNQDFEECDYRYLIQAAVQDHTGLTW 522
            TD+FCYTACPLMIGDRQC+KKV +SG +KW C+RCNQ+FE+CDYRYL+QA +QDHTGLTW
Sbjct: 475  TDSFCYTACPLMIGDRQCNKKVTRSGNSKWVCDRCNQEFEDCDYRYLLQAQIQDHTGLTW 534

Query: 521  VTAFQESGEEILGCSAKELYSLKYEEQDDVRFEEIIRSSLFNQFLLKLKIKEEMYGDEQK 342
            VTAFQE+GEEILG SAKELY LKYEEQDDV+F EIIRS +F+QFL +LKIKEE+YGDEQ+
Sbjct: 535  VTAFQETGEEILGVSAKELYMLKYEEQDDVKFGEIIRSKIFDQFLFRLKIKEEVYGDEQR 594

Query: 341  VKITVVKAEKVDPSSESRYL 282
            VK TVVKA++V+ SSES+Y+
Sbjct: 595  VKNTVVKADRVNYSSESKYI 614