BLASTX nr result

ID: Coptis24_contig00027036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027036
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    55   2e-09
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...    54   4e-09
gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japo...    52   2e-08
gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indi...    47   3e-08
gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indi...    52   3e-08

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 55.5 bits (132), Expect(2) = 2e-09
 Identities = 23/43 (53%), Positives = 35/43 (81%)
 Frame = -1

Query: 210 YRLISKIMANRLKSVLDKIISPFQSAFVKNRQITDNTILLQEI 82
           Y++++K++ NRLK +L  +ISP Q +FV NRQITDN I++QE+
Sbjct: 521 YKIVTKVIINRLKPILPSLISPTQCSFVPNRQITDNVIIVQEM 563



 Score = 31.2 bits (69), Expect(2) = 2e-09
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -2

Query: 65  GVQGCMAVKLDMHKAFDQLEW 3
           G +G MAVK+D  KA+D+L W
Sbjct: 572 GKKGFMAVKIDFEKAYDRLRW 592


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score = 53.9 bits (128), Expect(2) = 4e-09
 Identities = 27/43 (62%), Positives = 32/43 (74%)
 Frame = -1

Query: 210 YRLISKIMANRLKSVLDKIISPFQSAFVKNRQITDNTILLQEI 82
           Y+LISK++ANRLK +L  IIS  QSAFV  R ITDN +L  EI
Sbjct: 95  YKLISKVLANRLKKILPNIISNSQSAFVPGRLITDNVLLAYEI 137



 Score = 31.6 bits (70), Expect(2) = 4e-09
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -2

Query: 65  GVQGCMAVKLDMHKAFDQLEW 3
           G  G  A+KLDM KA+D++EW
Sbjct: 147 GAGGLAAIKLDMSKAYDRVEW 167


>gb|EEE51862.1| hypothetical protein OsJ_33393 [Oryza sativa Japonica Group]
          Length = 662

 Score = 52.4 bits (124), Expect(2) = 2e-08
 Identities = 22/43 (51%), Positives = 35/43 (81%)
 Frame = -1

Query: 210 YRLISKIMANRLKSVLDKIISPFQSAFVKNRQITDNTILLQEI 82
           Y+++SK++ANRLK++L ++ISP QSAFV  R I+DN ++  E+
Sbjct: 208 YKIVSKVLANRLKTILPEVISPTQSAFVPGRLISDNILVAYEM 250



 Score = 31.2 bits (69), Expect(2) = 2e-08
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -2

Query: 65  GVQGCMAVKLDMHKAFDQLEW 3
           G  G  A+KLDM KA+D++EW
Sbjct: 260 GKMGYAAIKLDMSKAYDRVEW 280


>gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indica Group]
          Length = 1546

 Score = 47.4 bits (111), Expect(2) = 3e-08
 Identities = 25/49 (51%), Positives = 33/49 (67%)
 Frame = -1

Query: 210 YRLISKIMANRLKSVLDKIISPFQSAFVKNRQITDNTILLQEIKINKKR 64
           Y++ISK+++ RLK +L +IIS  QSAFV  R ITDN +L  E     KR
Sbjct: 287 YKVISKMLSFRLKQILPEIISDHQSAFVPGRLITDNILLAYECIHTMKR 335



 Score = 35.4 bits (80), Expect(2) = 3e-08
 Identities = 14/21 (66%), Positives = 18/21 (85%)
 Frame = -2

Query: 65  GVQGCMAVKLDMHKAFDQLEW 3
           G +G  AVKLDMHKA+D++EW
Sbjct: 338 GRKGLCAVKLDMHKAYDRVEW 358


>gb|EEC84982.1| hypothetical protein OsI_32248 [Oryza sativa Indica Group]
           gi|222630794|gb|EEE62926.1| hypothetical protein
           OsJ_17731 [Oryza sativa Japonica Group]
          Length = 893

 Score = 51.6 bits (122), Expect(2) = 3e-08
 Identities = 25/43 (58%), Positives = 32/43 (74%)
 Frame = -1

Query: 210 YRLISKIMANRLKSVLDKIISPFQSAFVKNRQITDNTILLQEI 82
           Y+L SK+++NRLK +L  IISP QSAFV  R ITDN +L  E+
Sbjct: 189 YKLASKVLSNRLKLILPDIISPNQSAFVPQRLITDNVLLAYEM 231



 Score = 30.8 bits (68), Expect(2) = 3e-08
 Identities = 12/21 (57%), Positives = 17/21 (80%)
 Frame = -2

Query: 65  GVQGCMAVKLDMHKAFDQLEW 3
           G +G  A+KLDM KA+D++EW
Sbjct: 241 GREGYAALKLDMSKAYDRVEW 261


Top