BLASTX nr result

ID: Coptis24_contig00027024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027024
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265051.2| PREDICTED: uncharacterized protein LOC100245...   420   e-115
emb|CBI17341.3| unnamed protein product [Vitis vinifera]              420   e-115
emb|CAN62559.1| hypothetical protein VITISV_009207 [Vitis vinifera]   418   e-114
ref|XP_002529641.1| conserved hypothetical protein [Ricinus comm...   409   e-112
ref|XP_002327656.1| predicted protein [Populus trichocarpa] gi|2...   399   e-109

>ref|XP_002265051.2| PREDICTED: uncharacterized protein LOC100245548 [Vitis vinifera]
          Length = 1169

 Score =  420 bits (1080), Expect = e-115
 Identities = 217/326 (66%), Positives = 250/326 (76%), Gaps = 3/326 (0%)
 Frame = +2

Query: 2    PPSVVTGCSKDTTSELAMVVSRNTKDLVEIITEVDEYFLRAADTGGHVXXXXXXXXXXVC 181
            PPSVV+G SKDT+SELAMVVSRN+KDL EI+ EVD+YFL+AAD G  V            
Sbjct: 701  PPSVVSGFSKDTSSELAMVVSRNSKDLAEIVKEVDDYFLKAADAGSEVSLLLEIPRSTFS 760

Query: 182  QQRSTGKIYNSGKNLSPLPWTWRSNSKTSSGGFGRLCEETGLSDVVSGGV--ATSSHCST 355
             Q   GK+Y+ GK+ +PL   W SNSK +  GFGRLCEE  ++D+  GG+   +SSHCST
Sbjct: 761  NQTG-GKVYSCGKSSNPLWCPWASNSKLN--GFGRLCEEMVVTDIAGGGIISGSSSHCST 817

Query: 356  VERLYAWEKKLFEEVKNAESIKLEHEKRVTQLRKQELK-GADYIXXXXXXXXXXXXXSMM 532
            VERLYAWEKKLF+EVKNAESIK+EHEK V QLRK E+K  ADY+             S M
Sbjct: 818  VERLYAWEKKLFQEVKNAESIKIEHEKCVAQLRKLEVKRAADYVKTEKTKKEVEKLESRM 877

Query: 533  TVATQAIETTSTEIIRVREIELYPQLLELVRGLRSMWRSVYECHQVQTHIVDQLKFLNTI 712
             VA+QAIETTSTEII++RE ELYPQLL++V+G  SMWRS+YECHQVQ HIV QLK+LN I
Sbjct: 878  MVASQAIETTSTEIIKLRESELYPQLLDIVKGSMSMWRSMYECHQVQMHIVQQLKYLNAI 937

Query: 713  PSTEPTSEIHRQSTLQLELEVQQWHLAFCDLVKAQRDYMHSLTGWLRLSLFQFNNEQLTK 892
            PSTEPTSEIHRQSTLQLELEVQQWH  FC LVK QRDY+ +LTGWLRLSLFQF+   L+K
Sbjct: 938  PSTEPTSEIHRQSTLQLELEVQQWHSTFCSLVKTQRDYIQALTGWLRLSLFQFSKNPLSK 997

Query: 893  TRQNSAIYSLCEEWQQALDRIPDKVA 970
            TRQ S IYSLCEEW  ALDR+PDKVA
Sbjct: 998  TRQESMIYSLCEEWHLALDRVPDKVA 1023


>emb|CBI17341.3| unnamed protein product [Vitis vinifera]
          Length = 486

 Score =  420 bits (1080), Expect = e-115
 Identities = 217/326 (66%), Positives = 250/326 (76%), Gaps = 3/326 (0%)
 Frame = +2

Query: 2   PPSVVTGCSKDTTSELAMVVSRNTKDLVEIITEVDEYFLRAADTGGHVXXXXXXXXXXVC 181
           PPSVV+G SKDT+SELAMVVSRN+KDL EI+ EVD+YFL+AAD G  V            
Sbjct: 18  PPSVVSGFSKDTSSELAMVVSRNSKDLAEIVKEVDDYFLKAADAGSEVSLLLEIPRSTFS 77

Query: 182 QQRSTGKIYNSGKNLSPLPWTWRSNSKTSSGGFGRLCEETGLSDVVSGGV--ATSSHCST 355
            Q   GK+Y+ GK+ +PL   W SNSK +  GFGRLCEE  ++D+  GG+   +SSHCST
Sbjct: 78  NQTG-GKVYSCGKSSNPLWCPWASNSKLN--GFGRLCEEMVVTDIAGGGIISGSSSHCST 134

Query: 356 VERLYAWEKKLFEEVKNAESIKLEHEKRVTQLRKQELK-GADYIXXXXXXXXXXXXXSMM 532
           VERLYAWEKKLF+EVKNAESIK+EHEK V QLRK E+K  ADY+             S M
Sbjct: 135 VERLYAWEKKLFQEVKNAESIKIEHEKCVAQLRKLEVKRAADYVKTEKTKKEVEKLESRM 194

Query: 533 TVATQAIETTSTEIIRVREIELYPQLLELVRGLRSMWRSVYECHQVQTHIVDQLKFLNTI 712
            VA+QAIETTSTEII++RE ELYPQLL++V+G  SMWRS+YECHQVQ HIV QLK+LN I
Sbjct: 195 MVASQAIETTSTEIIKLRESELYPQLLDIVKGSMSMWRSMYECHQVQMHIVQQLKYLNAI 254

Query: 713 PSTEPTSEIHRQSTLQLELEVQQWHLAFCDLVKAQRDYMHSLTGWLRLSLFQFNNEQLTK 892
           PSTEPTSEIHRQSTLQLELEVQQWH  FC LVK QRDY+ +LTGWLRLSLFQF+   L+K
Sbjct: 255 PSTEPTSEIHRQSTLQLELEVQQWHSTFCSLVKTQRDYIQALTGWLRLSLFQFSKNPLSK 314

Query: 893 TRQNSAIYSLCEEWQQALDRIPDKVA 970
           TRQ S IYSLCEEW  ALDR+PDKVA
Sbjct: 315 TRQESMIYSLCEEWHLALDRVPDKVA 340


>emb|CAN62559.1| hypothetical protein VITISV_009207 [Vitis vinifera]
          Length = 627

 Score =  418 bits (1074), Expect = e-114
 Identities = 216/326 (66%), Positives = 249/326 (76%), Gaps = 3/326 (0%)
 Frame = +2

Query: 2    PPSVVTGCSKDTTSELAMVVSRNTKDLVEIITEVDEYFLRAADTGGHVXXXXXXXXXXVC 181
            PPSVV+G SKDT+S LAMVVSRN+KDL EI+ EVD+YFL+AAD G  V            
Sbjct: 159  PPSVVSGFSKDTSSXLAMVVSRNSKDLAEIVKEVDDYFLKAADAGSEVSLLLEIPRSTFS 218

Query: 182  QQRSTGKIYNSGKNLSPLPWTWRSNSKTSSGGFGRLCEETGLSDVVSGGV--ATSSHCST 355
             Q   GK+Y+ GK+ +PL   W SNSK +  GFGRLCEE  ++D+  GG+   + SHCST
Sbjct: 219  NQTG-GKVYSCGKSSNPLWCPWVSNSKLN--GFGRLCEEMVVTDIAGGGIISGSGSHCST 275

Query: 356  VERLYAWEKKLFEEVKNAESIKLEHEKRVTQLRKQELK-GADYIXXXXXXXXXXXXXSMM 532
            VERLYAWEKKLF+EVKNAESIK+EHEK V QLRK E+K  ADY+             S M
Sbjct: 276  VERLYAWEKKLFQEVKNAESIKIEHEKCVAQLRKLEVKRAADYVKTEKTKKEVEKLESRM 335

Query: 533  TVATQAIETTSTEIIRVREIELYPQLLELVRGLRSMWRSVYECHQVQTHIVDQLKFLNTI 712
             VA+QAIETTSTEII++RE ELYPQLL++V+GL SMWRS+YECHQVQ HIV QLK+LN I
Sbjct: 336  MVASQAIETTSTEIIKLRESELYPQLLDIVKGLMSMWRSMYECHQVQMHIVQQLKYLNAI 395

Query: 713  PSTEPTSEIHRQSTLQLELEVQQWHLAFCDLVKAQRDYMHSLTGWLRLSLFQFNNEQLTK 892
            PSTEPTSEIHRQSTLQLELEVQQWH  FC LVK QRDY+ +LTGWLRLSLFQF+   L+K
Sbjct: 396  PSTEPTSEIHRQSTLQLELEVQQWHSTFCSLVKTQRDYIQALTGWLRLSLFQFSKNPLSK 455

Query: 893  TRQNSAIYSLCEEWQQALDRIPDKVA 970
            TRQ S IYSLCEEW  ALDR+PDKVA
Sbjct: 456  TRQESMIYSLCEEWHLALDRVPDKVA 481


>ref|XP_002529641.1| conserved hypothetical protein [Ricinus communis]
            gi|223530867|gb|EEF32728.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 637

 Score =  409 bits (1050), Expect = e-112
 Identities = 216/328 (65%), Positives = 249/328 (75%), Gaps = 5/328 (1%)
 Frame = +2

Query: 2    PPSVVTGCSKDTTS----ELAMVVSRNTKDLVEIITEVDEYFLRAADTGGHVXXXXXXXX 169
            PPS+++G SK+T S    ELAMVVSRN+KDLVEI+ EVDEYFL+AAD GG +        
Sbjct: 172  PPSIISGFSKETCSGSGSELAMVVSRNSKDLVEIVKEVDEYFLKAADAGGQLSLLLEVPN 231

Query: 170  XXVCQQRSTGKIYNSGKNL-SPLPWTWRSNSKTSSGGFGRLCEETGLSDVVSGGVATSSH 346
                 Q   GKIY+ G NL SP  WTW S+ K +  GFG++ EE   S+V   GV   SH
Sbjct: 232  PNFSTQNKGGKIYDHGCNLTSPSLWTWSSSPKMN--GFGKMSEEMMGSNV---GV---SH 283

Query: 347  CSTVERLYAWEKKLFEEVKNAESIKLEHEKRVTQLRKQELKGADYIXXXXXXXXXXXXXS 526
            CSTVERLYAWEKKLF+EVKNAESIK+EHEK+V  LRK E+K ADY+             S
Sbjct: 284  CSTVERLYAWEKKLFQEVKNAESIKIEHEKKVALLRKLEVKRADYVKTEKTKKEVEKLES 343

Query: 527  MMTVATQAIETTSTEIIRVREIELYPQLLELVRGLRSMWRSVYECHQVQTHIVDQLKFLN 706
             M VATQAIETTS EII++RE ELYPQLLEL++GL  MWRS+YE HQVQTHIV QLK+LN
Sbjct: 344  QMMVATQAIETTSAEIIKLRETELYPQLLELLKGLMCMWRSMYEAHQVQTHIVQQLKYLN 403

Query: 707  TIPSTEPTSEIHRQSTLQLELEVQQWHLAFCDLVKAQRDYMHSLTGWLRLSLFQFNNEQL 886
            TIPSTEPTSEIHRQSTLQLELEVQQWH +FC+L+KAQRDY+ SLTGWLRLSLFQF+N  L
Sbjct: 404  TIPSTEPTSEIHRQSTLQLELEVQQWHQSFCNLIKAQRDYIQSLTGWLRLSLFQFSNNPL 463

Query: 887  TKTRQNSAIYSLCEEWQQALDRIPDKVA 970
            ++T Q S IYSLCEEW  A+DRIPDKVA
Sbjct: 464  SRTSQESRIYSLCEEWHHAIDRIPDKVA 491


>ref|XP_002327656.1| predicted protein [Populus trichocarpa] gi|222836741|gb|EEE75134.1|
            predicted protein [Populus trichocarpa]
          Length = 632

 Score =  399 bits (1026), Expect = e-109
 Identities = 211/329 (64%), Positives = 244/329 (74%), Gaps = 6/329 (1%)
 Frame = +2

Query: 2    PPSVVTGCSKDTTS----ELAMVVSRNTKDLVEIITEVDEYFLRAADTGGHVXXXXXXXX 169
            PPSV +   K+  S    ELAMVVSRN+KDLVEII EVDEYFL+AAD GG +        
Sbjct: 157  PPSVASRFPKENASGSGSELAMVVSRNSKDLVEIIKEVDEYFLKAADAGGQLSRVLEVSS 216

Query: 170  XXV-CQQRSTGKIYNSGKNL-SPLPWTWRSNSKTSSGGFGRLCEETGLSDVVSGGVATSS 343
              +  +Q   G++YN G NL SP  WTW S+ K    GFG++ EE  +S V SGGVA  S
Sbjct: 217  PNLSARQGKGGRVYNYGCNLTSPSSWTWGSSPKLD--GFGKMSEEMVVSHVGSGGVAHVS 274

Query: 344  HCSTVERLYAWEKKLFEEVKNAESIKLEHEKRVTQLRKQELKGADYIXXXXXXXXXXXXX 523
            HCSTVERLYAWEKKLF EVKNAES+K+EHEK+V  LRK E++ ADY+             
Sbjct: 275  HCSTVERLYAWEKKLFIEVKNAESLKIEHEKKVALLRKLEVRRADYVKTEKIKKEVEKLE 334

Query: 524  SMMTVATQAIETTSTEIIRVREIELYPQLLELVRGLRSMWRSVYECHQVQTHIVDQLKFL 703
            S M VATQ IETTS EII++RE ELYPQLLELV+GL  MWR +YE HQVQTHIV QLK+L
Sbjct: 335  SQMIVATQGIETTSAEIIKLRETELYPQLLELVKGLICMWRGMYESHQVQTHIVQQLKYL 394

Query: 704  NTIPSTEPTSEIHRQSTLQLELEVQQWHLAFCDLVKAQRDYMHSLTGWLRLSLFQFNNEQ 883
            N IPSTEPTSEIHRQSTLQLELEVQQWH +FC++VKAQRDY+ SLTGWLRLSLFQF+   
Sbjct: 395  NAIPSTEPTSEIHRQSTLQLELEVQQWHHSFCNVVKAQRDYIQSLTGWLRLSLFQFSKNP 454

Query: 884  LTKTRQNSAIYSLCEEWQQALDRIPDKVA 970
            +++T Q S IYSLCEEW  A+DRIPDKVA
Sbjct: 455  ISRTSQESRIYSLCEEWNHAVDRIPDKVA 483


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