BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027015
         (909 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g...   119   1e-24
ref|XP_002331319.1| f-box family protein [Populus trichocarpa] g...   117   5e-24
ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|2...   113   7e-23
ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...   111   2e-22
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   103   7e-20

>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
            gi|222873903|gb|EEF11034.1| f-box family protein [Populus
            trichocarpa]
          Length = 453

 Score =  119 bits (297), Expect = 1e-24
 Identities = 100/332 (30%), Positives = 158/332 (47%), Gaps = 29/332 (8%)
 Frame = +1

Query: 1    VLHHILSFLDMSQIIQTSLLSKRWRYIWVSLPYLNFNDLAWKS-------SGESKCFIDF 159
            +LHHILSF+D  Q++QT +LSKRW  +W S PYL+FN   + S         +   F DF
Sbjct: 44   LLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYYDDDMNNFTDF 103

Query: 160  VHNVLLYRDNSPVYKFCLDCFICDRDRSEDRICSMVIAAVRKNTQEVHVNIRQQEI-VEL 336
            +++VL+ R+N   +K  LD     RD     + S++  AV+ + +E+ +N    ++ + L
Sbjct: 104  IYHVLVRRNNVKAFKLSLD---TRRDCQYSVVESLIYYAVKHHVEEISINTAHWDVPIVL 160

Query: 337  PHSVFVSE-IRVFTLHTDFPVQLPNSVGTAAHLKTLKLVSAKLPKGDLNGELVLSCPVLE 513
            P   F  E +R   L  D  + LP S+G  + LKTL L  A+    + +G++  SCP LE
Sbjct: 161  PRCFFDCESLRSLKLKVDGGLALPKSLGLQS-LKTLHLGGAQ----NFDGKIFSSCPNLE 215

Query: 514  ILLLHNCESKHLNVFTISAFVLKNL-VVNHSYFPEASPCKIKICTPNLLSLRLECDMYKD 690
             L + +     +  F I A  LK+L ++N  Y      CK+ +  P L S + + +    
Sbjct: 216  NLTIEDICLNVIENFNIHALSLKSLEILNWRYNRIKQGCKVMLVAPKLTSFKFDGNTPLF 275

Query: 691  YSLEKLSSL--VSAKLQ-----------------FSLSLEGNAQRVCRILEGLYSVTTLT 813
            +S   L+SL  V+  LQ                  S   E        +++ L+   +  
Sbjct: 276  WSDVNLTSLDDVNVVLQRYHHSHNYPFYVVEDEYISEEDETEQGLGLNLIKMLHQFCSAK 335

Query: 814  WTTDSGHWLKAFLASPGVLDRLHKPFHNLKYL 909
              T S + ++     P  LD+   PF NLKYL
Sbjct: 336  SLTLSMNIIEILSEVPAALDKHPSPFSNLKYL 367


>ref|XP_002331319.1| f-box family protein [Populus trichocarpa]
            gi|222873902|gb|EEF11033.1| f-box family protein [Populus
            trichocarpa]
          Length = 453

 Score =  117 bits (292), Expect = 5e-24
 Identities = 101/332 (30%), Positives = 158/332 (47%), Gaps = 29/332 (8%)
 Frame = +1

Query: 1    VLHHILSFLDMSQIIQTSLLSKRWRYIWVSLPYLNFNDLAWKS-------SGESKCFIDF 159
            +LHHILSF+D  Q++QT +LSKRW  +W S PYL+FN   + S         E   F DF
Sbjct: 44   LLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYYDDEVNNFTDF 103

Query: 160  VHNVLLYRDNSPVYKFCLDCFICDRDRSEDRICSMVIAAVRKNTQEVHVNIRQQEI-VEL 336
            +++VL+ R N    K  LD     RD     + S++  AV+ + +E+ VN    ++ + L
Sbjct: 104  IYHVLVRRHNLKAVKISLDIL---RDTRCSLVESLIYYAVKHHVEEISVNTAHWDMPIVL 160

Query: 337  PHSVFVSE-IRVFTLHTDFPVQLPNSVGTAAHLKTLKLVSAKLPKGDLNGELVLSCPVLE 513
            P   F  E +R   L  D  + LP S+G  + LKTL L  A+    + +G++  +CP LE
Sbjct: 161  PRCFFDCESLRSLKLKVDGGIALPKSLGLQS-LKTLHLGGAR----NFDGKIFSTCPNLE 215

Query: 514  ILLLHNCESKHLNVFTISAFVLKNL-VVNHSYFPEASPCKIKICTPNLLSLRLECDMYKD 690
             L + +     +  F I A  LK+L ++N  Y      CK+ +  P L S +   +    
Sbjct: 216  NLKIEDIYLNTIENFNIHALNLKSLEILNWRYGRIMRGCKVMLFAPKLTSFKFYGNTPLF 275

Query: 691  YSLEKLSSL-----VSAKLQFS------------LSLEGNAQR--VCRILEGLYSVTTLT 813
            +S   L+SL     V  + Q S            +S E   ++     +++ L+   +  
Sbjct: 276  WSEVNLTSLDDVNVVLQRYQHSHNYPFYVVEDEYISEEDETEQGLGLNLIKMLHQFCSAK 335

Query: 814  WTTDSGHWLKAFLASPGVLDRLHKPFHNLKYL 909
              T S + ++     P  LD+   PF NLKYL
Sbjct: 336  SLTLSMNIIEILSEVPAALDKHPSPFSNLKYL 367


>ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|222873905|gb|EEF11036.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  113 bits (282), Expect = 7e-23
 Identities = 83/249 (33%), Positives = 128/249 (51%), Gaps = 10/249 (4%)
 Frame = +1

Query: 1   VLHHILSFLDMSQIIQTSLLSKRWRYIWVSLPYLNFNDLAWKS-------SGESKCFIDF 159
           +LHHILSFLD  Q++QT +LSKRW  +W S PYL+FN   + S         +   F DF
Sbjct: 25  LLHHILSFLDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLISSYYYDDDMNNFTDF 84

Query: 160 VHNVLLYRDNSPVYKFCLDCFICDRDRSEDRICSMVIAAVRKNTQEVHVNIRQQEI-VEL 336
           + +VL+ R+N   +K  LD     RD     + S++  AV+ + +E+ +N    ++ + L
Sbjct: 85  ISHVLVRRNNVKAFKLSLD---TRRDCQYSVVESLIYYAVKHHVEEISINTAHWDVPIVL 141

Query: 337 PHSVFVSE-IRVFTLHTDFPVQLPNSVGTAAHLKTLKLVSAKLPKGDLNGELVLSCPVLE 513
           P   F  E +R   L  D  + LP S+G  + LKTL L  A+    + +G++  SCP LE
Sbjct: 142 PRCFFDCESLRSLKLKVDGGLALPKSLGLQS-LKTLHLGGAQ----NFDGKIFSSCPNLE 196

Query: 514 ILLLHNCESKHLNVFTISAFVLKNL-VVNHSYFPEASPCKIKICTPNLLSLRLECDMYKD 690
            L + +     +  F I A  LK+L ++N  Y      CK+ +  P L S +   +    
Sbjct: 197 NLTIEDICLNVIENFNIHALSLKSLEILNWRYNRIKQGCKVMLVAPKLTSFKFYGNTPLF 256

Query: 691 YSLEKLSSL 717
           +S   L+SL
Sbjct: 257 WSEVNLTSL 265


>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  111 bits (278), Expect = 2e-22
 Identities = 99/332 (29%), Positives = 159/332 (47%), Gaps = 29/332 (8%)
 Frame = +1

Query: 1   VLHHILSFLDMSQIIQTSLLSKRWRYIWVSLPYLNFNDLAWKS-------SGESKCFIDF 159
           +LH ILSF+D  Q++QT +LSKRW  +W S PYL+FN   + S         E   F DF
Sbjct: 25  LLHRILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYYEDEMVNFTDF 84

Query: 160 VHNVLLYRDNSPVYKFCLDCFICDRDRSEDRICSMVIAAVRKNTQEVHVNIRQQEI-VEL 336
           ++ VL+ R+N    K  LD  +C   R    + S++  AV+ + +E+ ++   +++ + L
Sbjct: 85  INQVLVRRNNFKAIKISLD--LCGHTR-YSLVESLIYYAVKHHAEEICIDTACRDVPIVL 141

Query: 337 PHSVFVSE-IRVFTLHTDFPVQLPNSVGTAAHLKTLKLVSAKLPKGDLNGELVLSCPVLE 513
           P   F  E +R   L  D  + LP S+G  + LKTL L  A+    + +G++  SCP LE
Sbjct: 142 PRCFFNCESLRSLKLRIDGGIALPKSLGLPS-LKTLHLGGAQ----NFDGKIFSSCPNLE 196

Query: 514 ILLLHNCESKHLNVFTISAFVLKNL-VVNHSYFPEASPCKIKICTPNLLSLRLECDMYKD 690
            L + +     +  F I A  LK+L ++N  Y      CK+ +  P L S + + +    
Sbjct: 197 NLTIEDICLNTIENFNIHALNLKSLEILNWRYSRIMRGCKVMLFAPKLTSFKFDGNTPLF 256

Query: 691 YSLEKLSSL--VSAKLQ----------------FSLSLEGNAQRVC-RILEGLYSVTTLT 813
           +S   L+SL  V+  LQ                +    +   Q  C  +L+ L+   +  
Sbjct: 257 WSEVNLTSLDDVNVVLQRYYYRHDYQFYVDEDEYISGEDETKQGFCLDLLKMLHQFCSAK 316

Query: 814 WTTDSGHWLKAFLASPGVLDRLHKPFHNLKYL 909
             T S + ++     P  L++   PF NLKYL
Sbjct: 317 SLTLSMNIIEVLSKVPAALNKHPSPFSNLKYL 348


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  103 bits (256), Expect = 7e-20
 Identities = 84/257 (32%), Positives = 127/257 (49%), Gaps = 15/257 (5%)
 Frame = +1

Query: 1   VLHHILSFLDMSQIIQTSLLSKRWRYIWVSLPYLNFNDLAWKSSG-----ESK--CFIDF 159
           +L HILSFL     + TS+LSKRWRY+W S+P L+F+D  W +       E +   F +F
Sbjct: 19  LLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVELEERIIMFQNF 78

Query: 160 VHNVLLYRDNSPVYKFCLDCFICDRDRSEDRICSMVIAAVRKNTQEVHVNIRQQEIVELP 339
           V  VL + + S + KF L      RD + D + S +  A+ +  QE+ +++     VELP
Sbjct: 79  VDGVLRHSEVSCIKKFRLGY----RDNNLDSVYSWICIALERRVQELDLHLLIDWRVELP 134

Query: 340 HSVFVSE-IRVFTLHTDFPVQLPNSVGTAAHLKTLKLVSAKLPKGDLNGELVLSCPVLEI 516
              F+ + + V  L     + +P +V   + LK L L S +    D   +L+  CPVLE 
Sbjct: 135 PMFFICKTLVVVKLSCALFLDIPTTVWLPS-LKALHLKSVEYSDDDSIQKLLSGCPVLEE 193

Query: 517 LLLHNCESKHLNVFTISAFVLKNLVV-------NHSYFPEASPCKIKICTPNLLSLRLEC 675
           L++   E  +  V  +S   LK L +        H Y  E    K+ +  PNL  L +  
Sbjct: 194 LVIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLEYLSITD 253

Query: 676 DMYKDYSLEKLSSLVSA 726
            + KDY ++ L SLV A
Sbjct: 254 YLSKDYFVKDLPSLVKA 270