BLASTX nr result

ID: Coptis24_contig00027014 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00027014
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519541.1| PREDICTED: anaphase-promoting complex subuni...    71   8e-11
ref|XP_003545150.1| PREDICTED: LOW QUALITY PROTEIN: anaphase-pro...    70   2e-10
ref|XP_002532792.1| conserved hypothetical protein [Ricinus comm...    69   5e-10
emb|CBI22085.3| unnamed protein product [Vitis vinifera]               68   7e-10
emb|CBI33832.3| unnamed protein product [Vitis vinifera]               67   1e-09

>ref|XP_003519541.1| PREDICTED: anaphase-promoting complex subunit 5-like [Glycine max]
          Length = 187

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/46 (71%), Positives = 43/46 (93%)
 Frame = -1

Query: 335 LASEAFYLMAQVFNNLGQLEEREKAAASFQKHVLALQDAKNEEEPL 198
           LASEAFYLMA V++ LGQLEERE+AAASFQKH+LAL++ ++E++PL
Sbjct: 138 LASEAFYLMAMVYDKLGQLEEREEAAASFQKHILALRNPQDEDDPL 183


>ref|XP_003545150.1| PREDICTED: LOW QUALITY PROTEIN: anaphase-promoting complex subunit
            5-like [Glycine max]
          Length = 922

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/46 (69%), Positives = 43/46 (93%)
 Frame = -1

Query: 335  LASEAFYLMAQVFNNLGQLEEREKAAASFQKHVLALQDAKNEEEPL 198
            LA+EAFYLMA V++ LGQLEERE+AAASFQKH+LAL++ ++E++PL
Sbjct: 873  LAAEAFYLMAMVYDKLGQLEEREEAAASFQKHILALRNPQDEDDPL 918


>ref|XP_002532792.1| conserved hypothetical protein [Ricinus communis]
            gi|223527462|gb|EEF29594.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 917

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 31/46 (67%), Positives = 42/46 (91%)
 Frame = -1

Query: 335  LASEAFYLMAQVFNNLGQLEEREKAAASFQKHVLALQDAKNEEEPL 198
            LA+EAFYLMA +F+ LG+LEERE+AAASF+KHV AL++ +NE++PL
Sbjct: 867  LAAEAFYLMAMIFDKLGKLEEREEAAASFKKHVTALENPQNEDDPL 912


>emb|CBI22085.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/46 (69%), Positives = 41/46 (89%)
 Frame = -1

Query: 335  LASEAFYLMAQVFNNLGQLEEREKAAASFQKHVLALQDAKNEEEPL 198
            LA+EAFYL+A VF+ LGQLEERE+AAASF KHV AL++ +NE++PL
Sbjct: 872  LAAEAFYLIAMVFDKLGQLEEREEAAASFMKHVKALENPQNEQDPL 917


>emb|CBI33832.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/46 (67%), Positives = 41/46 (89%)
 Frame = -1

Query: 335 LASEAFYLMAQVFNNLGQLEEREKAAASFQKHVLALQDAKNEEEPL 198
           LA+EAFYLMA VF+ LGQLEERE+AAASF KH+ AL++ ++E++PL
Sbjct: 203 LAAEAFYLMAMVFDKLGQLEEREEAAASFMKHIKALENPQDEQDPL 248


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