BLASTX nr result
ID: Coptis24_contig00026999
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026999 (274 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 71 8e-11 gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana] 67 2e-09 ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S... 64 1e-08 emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga... 62 4e-08 emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera] 62 5e-08 >emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1369 Score = 71.2 bits (173), Expect = 8e-11 Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 4/83 (4%) Frame = -3 Query: 242 IHAWNCRGMGSSTAVHNIKDLVCQHQPDILCLSETKVKEEKISKLGKALKYDNMFCVPAV 63 I +WNCRGMGS +A+ ++ L+ P I+ LSETK+K ++ + K LK+++M V Sbjct: 4 ILSWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCE 63 Query: 62 G----RRGGLTILWRAGVNLEVL 6 G RRGGL +LWR+ + ++V+ Sbjct: 64 GECRKRRGGLAMLWRSEIKVQVM 86 >gb|AAF17675.1|AC009243_2 F28K19.3 [Arabidopsis thaliana] Length = 238 Score = 67.0 bits (162), Expect = 2e-09 Identities = 27/75 (36%), Positives = 46/75 (61%) Frame = -3 Query: 233 WNCRGMGSSTAVHNIKDLVCQHQPDILCLSETKVKEEKISKLGKALKYDNMFCVPAVGRR 54 WNC+G+G V +K++ ++ PD++CLSETK + + + L + N VP++G Sbjct: 59 WNCQGLGIDLTVRRLKEINRKYLPDVICLSETKQRNDYVRDTCCELGFSNFVMVPSMGLS 118 Query: 53 GGLTILWRAGVNLEV 9 GGL +LW+ V++ V Sbjct: 119 GGLVVLWKPSVHISV 133 >ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor] gi|241936261|gb|EES09406.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor] Length = 753 Score = 64.3 bits (155), Expect = 1e-08 Identities = 26/75 (34%), Positives = 43/75 (57%) Frame = -3 Query: 233 WNCRGMGSSTAVHNIKDLVCQHQPDILCLSETKVKEEKISKLGKALKYDNMFCVPAVGRR 54 WNCRG+G+ V ++DL + P ++ + ET++ + ++ L L +DN F V + GR Sbjct: 6 WNCRGIGNPATVKELRDLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSFAVNSSGRS 65 Query: 53 GGLTILWRAGVNLEV 9 GGL + W V L + Sbjct: 66 GGLGLFWNNDVLLSI 80 >emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1363 Score = 62.4 bits (150), Expect = 4e-08 Identities = 29/73 (39%), Positives = 42/73 (57%) Frame = -3 Query: 233 WNCRGMGSSTAVHNIKDLVCQHQPDILCLSETKVKEEKISKLGKALKYDNMFCVPAVGRR 54 WN RG S + + DLV H+PD+L L ETK + + K L Y N +PA G+R Sbjct: 6 WNVRGANSKAFLWHALDLVKMHKPDLLILLETKCSSLRADQATKRLGYVNFRIIPAFGKR 65 Query: 53 GGLTILWRAGVNL 15 GG+ ++W+A + L Sbjct: 66 GGIWLMWKADIAL 78 >emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera] Length = 652 Score = 62.0 bits (149), Expect = 5e-08 Identities = 28/69 (40%), Positives = 40/69 (57%) Frame = -3 Query: 236 AWNCRGMGSSTAVHNIKDLVCQHQPDILCLSETKVKEEKISKLGKALKYDNMFCVPAVGR 57 +WNCRG+G+ V + ++ +PD + L ET V ++ KL L ++ FCV VGR Sbjct: 311 SWNCRGLGNPRTVLALCEINKSRKPDFIFLIETLVHSAQVEKLKSKLGFEGAFCVDRVGR 370 Query: 56 RGGLTILWR 30 GGL LWR Sbjct: 371 GGGLAFLWR 379