BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026991
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB40830.1| reverse transcriptase [Morus bombycis]                199   3e-49
gb|ACZ36946.1| reverse transcriptase, partial [Prunus mume]           194   6e-48
emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]   193   1e-47
gb|ACZ36938.1| reverse transcriptase, partial [Prunus mume]           189   2e-46
gb|ACU42183.1| reverse transcriptase [Prunus mume] gi|255928612|...   189   2e-46

>dbj|BAB40830.1| reverse transcriptase [Morus bombycis]
          Length = 143

 Score =  199 bits (505), Expect = 3e-49
 Identities = 89/135 (65%), Positives = 112/135 (82%)
 Frame = +2

Query: 2   LNLVTIKNKYPLPRIEDLFDQLKGARFFSKVDLRNGFHQLRVREGDISKTAFKTRYGHFE 181
           LN +TIKNKYPLPRI+DLFDQLKGA +FSK+DLR+G+HQLR++EGD+SKTAF+TRYGH+E
Sbjct: 9   LNKITIKNKYPLPRIDDLFDQLKGAAYFSKIDLRSGYHQLRIQEGDVSKTAFRTRYGHYE 68

Query: 182 YLVMPFGLTNAPAAFMDLMNGIFQKHXXXXXXXXXXXXXXYSRTREEHDKHLEITLQILR 361
           +LVMP GLTNAPAAF+DLMN +F+ H              YS+T+EEH++HL+  LQIL+
Sbjct: 69  FLVMPLGLTNAPAAFVDLMNRVFKDHLDKFVIVFIDDILIYSKTKEEHEEHLKTALQILK 128

Query: 362 EHKLYGKLSKCEFWL 406
           E++LY K SKCEFWL
Sbjct: 129 ENQLYAKFSKCEFWL 143


>gb|ACZ36946.1| reverse transcriptase, partial [Prunus mume]
          Length = 143

 Score =  194 bits (493), Expect = 6e-48
 Identities = 88/135 (65%), Positives = 110/135 (81%)
 Frame = +2

Query: 2   LNLVTIKNKYPLPRIEDLFDQLKGARFFSKVDLRNGFHQLRVREGDISKTAFKTRYGHFE 181
           LN +TIKNKYPLPRI+DLFDQL+G+R+FSK+DLR+G+HQLRV+  D+SKTAF+TRYGH+E
Sbjct: 9   LNRITIKNKYPLPRIDDLFDQLQGSRYFSKIDLRSGYHQLRVKAEDVSKTAFQTRYGHYE 68

Query: 182 YLVMPFGLTNAPAAFMDLMNGIFQKHXXXXXXXXXXXXXXYSRTREEHDKHLEITLQILR 361
           +LVMPFGLTNAPA FMDLMN +F+ +              YS ++EEH++HL I LQ LR
Sbjct: 69  FLVMPFGLTNAPAVFMDLMNRVFRPYLDQFVIVFIDDILIYSSSQEEHEQHLSIVLQTLR 128

Query: 362 EHKLYGKLSKCEFWL 406
           EHKL+ KLSKC+FWL
Sbjct: 129 EHKLFAKLSKCDFWL 143


>emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]
          Length = 1495

 Score =  193 bits (491), Expect = 1e-47
 Identities = 92/135 (68%), Positives = 108/135 (80%)
 Frame = +2

Query: 2    LNLVTIKNKYPLPRIEDLFDQLKGARFFSKVDLRNGFHQLRVREGDISKTAFKTRYGHFE 181
            LN VT+KNKYPLPRI+DLFDQLKGA++FSK+DLR G+HQLRVRE D+SKTAF+TRYGH+E
Sbjct: 691  LNRVTVKNKYPLPRIDDLFDQLKGAKYFSKIDLRTGYHQLRVREEDVSKTAFRTRYGHYE 750

Query: 182  YLVMPFGLTNAPAAFMDLMNGIFQKHXXXXXXXXXXXXXXYSRTREEHDKHLEITLQILR 361
            +LVMPFGLTNAPAAFMDLMN +F+ +              YSR+ EEH +HL  TL  LR
Sbjct: 751  FLVMPFGLTNAPAAFMDLMNRVFRAYLDXFVIVFVDDILIYSRSLEEHKQHLVTTLGTLR 810

Query: 362  EHKLYGKLSKCEFWL 406
             H+LYGKL K EFWL
Sbjct: 811  RHQLYGKLDKSEFWL 825


>gb|ACZ36938.1| reverse transcriptase, partial [Prunus mume]
          Length = 143

 Score =  189 bits (481), Expect = 2e-46
 Identities = 87/135 (64%), Positives = 109/135 (80%)
 Frame = +2

Query: 2   LNLVTIKNKYPLPRIEDLFDQLKGARFFSKVDLRNGFHQLRVREGDISKTAFKTRYGHFE 181
           LN +TIKNKYPLPRI+DLFDQL+G+R+FSK+DLR+G+HQLRV+  D+SKTAF+TRYGH+E
Sbjct: 9   LNRITIKNKYPLPRIDDLFDQLQGSRYFSKIDLRSGYHQLRVKAEDVSKTAFRTRYGHYE 68

Query: 182 YLVMPFGLTNAPAAFMDLMNGIFQKHXXXXXXXXXXXXXXYSRTREEHDKHLEITLQILR 361
           +LVMPFGLTNAPA FMDLMN +FQ +              YS ++E+H++HL I LQ LR
Sbjct: 69  FLVMPFGLTNAPAVFMDLMNRVFQPYLDQFVIVFIDDILIYSSSQEKHEQHLSIVLQTLR 128

Query: 362 EHKLYGKLSKCEFWL 406
           EHKL+ KLSKC+F L
Sbjct: 129 EHKLFAKLSKCDFGL 143


>gb|ACU42183.1| reverse transcriptase [Prunus mume] gi|255928612|gb|ACU42194.1|
           reverse transcriptase [Prunus mume]
          Length = 143

 Score =  189 bits (481), Expect = 2e-46
 Identities = 87/135 (64%), Positives = 109/135 (80%)
 Frame = +2

Query: 2   LNLVTIKNKYPLPRIEDLFDQLKGARFFSKVDLRNGFHQLRVREGDISKTAFKTRYGHFE 181
           LN VTIKNKYPLPRI+DLFDQL+G+ FFSK+DLR+G+HQLRV+  DI KTAF+TRYGH+E
Sbjct: 9   LNRVTIKNKYPLPRIDDLFDQLRGSHFFSKIDLRSGYHQLRVKAEDIPKTAFRTRYGHYE 68

Query: 182 YLVMPFGLTNAPAAFMDLMNGIFQKHXXXXXXXXXXXXXXYSRTREEHDKHLEITLQILR 361
           ++VMPFGLTNAPA FMD+MN IF+ +              YS+++EEH++HL I LQ LR
Sbjct: 69  FVVMPFGLTNAPAEFMDMMNRIFRPYLDQFVIIFIDDILIYSKSQEEHEEHLRIVLQTLR 128

Query: 362 EHKLYGKLSKCEFWL 406
           E++LY KLSKCEFW+
Sbjct: 129 ENQLYAKLSKCEFWV 143