BLASTX nr result

ID: Coptis24_contig00026985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026985
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAZ40333.1| hypothetical protein [Raphanus sativus]                60   3e-07

>emb|CAZ40333.1| hypothetical protein [Raphanus sativus]
          Length = 785

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = -3

Query: 556 KINPNGYRLKLPNTLHTVDVFNVKHLVPYHGDNSDEESVNSRANSFQPGEDD 401
           +INPN YR++LP+ L T DVFN+KHL P+ GDN D +   S AN  QPG  D
Sbjct: 733 RINPNVYRVRLPSHLRTSDVFNIKHLSPFKGDNDDPD---SWANPSQPGGPD 781


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