BLASTX nr result

ID: Coptis24_contig00026969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026969
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283553.1| PREDICTED: uncharacterized protein LOC100244...   141   9e-32
ref|XP_002526984.1| conserved hypothetical protein [Ricinus comm...   105   4e-21
ref|XP_003614631.1| hypothetical protein MTR_5g056480 [Medicago ...    84   2e-14
ref|XP_002314857.1| predicted protein [Populus trichocarpa] gi|2...    75   8e-12
ref|XP_002312403.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09

>ref|XP_002283553.1| PREDICTED: uncharacterized protein LOC100244058 [Vitis vinifera]
          Length = 317

 Score =  141 bits (355), Expect = 9e-32
 Identities = 79/178 (44%), Positives = 114/178 (64%), Gaps = 9/178 (5%)
 Frame = +3

Query: 3   KSVVKSWDGLGLGLNFEKASESLISLWDLNKNEITSSFSSGMCQIPALSMPSPAVIVAAG 182
           KS+VK WDGL L    + +  SL+S++DLNK+   SSF  G  + P++S+ SPAV+V+  
Sbjct: 147 KSIVKLWDGLSL----DNSCGSLVSIYDLNKDLNKSSFFGGTHRFPSVSVTSPAVVVSTM 202

Query: 183 LETSRNVALQVFDTRVGRQIPQIFAEWQPRR---------KFEKLYIQNDVSVNNRAVVV 335
              + N AL+V+DTRVGRQIP IFAEW+P+            EK+Y+++DV+     + V
Sbjct: 203 TGNAMNTALRVWDTRVGRQIPAIFAEWRPQMGKRVSISTGGIEKVYVRDDVT---GELTV 259

Query: 336 RDIRKVDLLLENLTESDVNTWWDSDAVIVDGNQQVCYSGNGCGSVVTRCRNAVFSYLF 509
            D+R     L+N+TE D  TWWD+DAV+V  +    ++  GC S+V+RC +AV SYLF
Sbjct: 260 GDMRNASSPLQNVTECDGGTWWDADAVMVYKDYVDQWAVKGCESIVSRCCDAVKSYLF 317


>ref|XP_002526984.1| conserved hypothetical protein [Ricinus communis]
           gi|223533619|gb|EEF35356.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 337

 Score =  105 bits (263), Expect = 4e-21
 Identities = 73/170 (42%), Positives = 97/170 (57%), Gaps = 15/170 (8%)
 Frame = +3

Query: 3   KSVVKSWD--GLGLGLNFEKASESLISLWDLNKNEITSSFSSGMCQIPALSMPS--PAVI 170
           KSVVK WD  G G GLN +  S + +SL D+NK     S       IPA+S  S  PAVI
Sbjct: 169 KSVVKLWDNLGFGFGLNLDNNSRNCVSLHDINKELSLFSILGERSDIPAVSTSSSSPAVI 228

Query: 171 VAAGLETSRNVALQVFDTRVGRQIPQIFAEWQPRR-KFE----------KLYIQNDVSVN 317
           V++    + N+ L+V+DTRVG +IP+I AEW+PR  KF           K+Y+++DV+  
Sbjct: 229 VSSEANVAGNL-LKVWDTRVGCRIPEILAEWRPRLGKFVGISSGGGGVGKVYVRDDVTGR 287

Query: 318 NRAVVVRDIRKVDLLLENLTESDVNTWWDSDAVIVDGNQQVCYSGNGCGS 467
              + V D+RKV   L N TE+DV+TWWD+D V V          NG GS
Sbjct: 288 ---LTVGDMRKVKSPLVNATETDVDTWWDADGVSVGEED------NGVGS 328


>ref|XP_003614631.1| hypothetical protein MTR_5g056480 [Medicago truncatula]
           gi|355515966|gb|AES97589.1| hypothetical protein
           MTR_5g056480 [Medicago truncatula]
          Length = 314

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 56/151 (37%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
 Frame = +3

Query: 6   SVVKSWD--GLGLGLNFEKASESLISLWDLNKNEITSSFSSGMCQIPALSMPSPAVIVAA 179
           +VVK WD  G GLGL+F++  + +IS    N +   +S ++           SP VIV+A
Sbjct: 172 NVVKLWDSIGFGLGLDFDEYEDGVIS--STNPHAPLTSAAA-----------SPDVIVSA 218

Query: 180 GLETSRNVALQVFDTRVGRQIPQIFAEWQP---------RRKFEKLYIQNDVSVNNRAVV 332
           G     N+A++++DTR+ R+ P + AEW P             +K+Y++++     + + 
Sbjct: 219 GEGAHGNLAVEIWDTRLRRRKPSVVAEWGPTVGNTLRVESGGVQKVYVRDN---GRQRLT 275

Query: 333 VRDIRKVDLLLENLTESDV-NTWWDSDAVIV 422
           V D+RKV   L N+TESD  NTWWD+DAVIV
Sbjct: 276 VGDMRKVSFPLGNVTESDADNTWWDADAVIV 306


>ref|XP_002314857.1| predicted protein [Populus trichocarpa] gi|222863897|gb|EEF01028.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
 Frame = +3

Query: 3   KSVVKSWDGLGLGLNFE-----KASESLISLWDLNKNEITSSFSSGMCQIPALSMPSPAV 167
           ++VVK WD LGLGL F       +  +++S +D+N      S     C   + +  SP  
Sbjct: 173 RNVVKLWDNLGLGLGFNLNNGGDSRSAVVSFYDINNERNICSIFGSKCD--SFTAVSP-- 228

Query: 168 IVAAGLETSRNVALQVFDTRVGRQIPQIFAEWQPRRK------------FEKLYIQNDVS 311
                              RVG ++P++FAE +P                +K+Y+++DV+
Sbjct: 229 -------------------RVGFRMPEVFAELRPMLGKIVGVSGGGGGGAKKVYVRDDVT 269

Query: 312 VNNRAVVVRDIRKVDLLLENLTESDVNTWWDSDAVIVD 425
                + V DIRKV   L N+TESDV+TWWD+DAVIV+
Sbjct: 270 GE---LTVGDIRKVSSPLVNVTESDVDTWWDADAVIVE 304


>ref|XP_002312403.1| predicted protein [Populus trichocarpa] gi|222852223|gb|EEE89770.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 39/93 (41%), Positives = 61/93 (65%), Gaps = 11/93 (11%)
 Frame = +3

Query: 180 GLET--SRNVALQVFDTRVGRQIPQIFAEWQPRRK---------FEKLYIQNDVSVNNRA 326
           GL+T  S + +L ++DTRVG ++P++FAE +P             EK+Y+++DV+     
Sbjct: 183 GLKTNLSGHSSLSLWDTRVGFRVPEVFAELRPTLGKIVGVVVGGVEKVYVRDDVTGE--- 239

Query: 327 VVVRDIRKVDLLLENLTESDVNTWWDSDAVIVD 425
           + V D+RK    L N+TESDV+TWW++DAVIV+
Sbjct: 240 LTVGDMRKPSSPLVNVTESDVDTWWETDAVIVE 272


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