BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026966
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ09751.1| reverse transcriptase [Camellia sinensis]             139   3e-31
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]         139   3e-31
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           139   3e-31
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   138   4e-31
gb|ACZ36925.1| reverse transcriptase, partial [Prunus mume]           137   7e-31

>emb|CAJ09751.1| reverse transcriptase [Camellia sinensis]
          Length = 89

 Score =  139 bits (349), Expect = 3e-31
 Identities = 62/83 (74%), Positives = 75/83 (90%)
 Frame = -2

Query: 270 DLEEDVYMDQPEGFEVKGKEHLVCKLIKSLYGLKQAPRQWYIKFDSFMAKQEYKKPASDH 91
           DL+E++YM QPEGFEVKGKE+LVC+L KSLYGLKQAPRQWY KFDSFM   EYK+ A+DH
Sbjct: 7   DLKEEIYMAQPEGFEVKGKENLVCRLKKSLYGLKQAPRQWYEKFDSFMVGHEYKRTAADH 66

Query: 90  CVFLQRFPDRDFIVLLLYVDDML 22
           CV++++FPD +FI+LLLYVDDML
Sbjct: 67  CVYVRKFPDGNFIILLLYVDDML 89


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/88 (71%), Positives = 75/88 (85%)
 Frame = -2

Query: 270  DLEEDVYMDQPEGFEVKGKEHLVCKLIKSLYGLKQAPRQWYIKFDSFMAKQEYKKPASDH 91
            DL+E++YM+QPEGF+VKGKE  VC+L KSLYGLKQAPRQWY KF S M+K  YKK +SDH
Sbjct: 929  DLDEEIYMEQPEGFKVKGKEDYVCRLKKSLYGLKQAPRQWYKKFTSVMSKHGYKKTSSDH 988

Query: 90   CVFLQRFPDRDFIVLLLYVDDMLIVGPN 7
            CVF+ R+ D DF++LLLYVDDMLIVG N
Sbjct: 989  CVFVNRYSDDDFVILLLYVDDMLIVGRN 1016


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/90 (70%), Positives = 75/90 (83%)
 Frame = -2

Query: 270  DLEEDVYMDQPEGFEVKGKEHLVCKLIKSLYGLKQAPRQWYIKFDSFMAKQEYKKPASDH 91
            DLEE++YM+QP+GF+ KGKE  VC+L KSLYGLKQAPRQWY KF+S M +  YKK  SDH
Sbjct: 932  DLEEEIYMEQPDGFQQKGKEDYVCRLRKSLYGLKQAPRQWYKKFESVMGQHGYKKTTSDH 991

Query: 90   CVFLQRFPDRDFIVLLLYVDDMLIVGPNIN 1
            CVF Q+F D DFI+LLLYVDDMLIVG N++
Sbjct: 992  CVFAQKFSDDDFIILLLYVDDMLIVGRNVS 1021


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/86 (73%), Positives = 74/86 (86%)
 Frame = -2

Query: 270  DLEEDVYMDQPEGFEVKGKEHLVCKLIKSLYGLKQAPRQWYIKFDSFMAKQEYKKPASDH 91
            DLEE++YM+QPEGFEV GK+H+VCKL KSLYGLKQAPRQWY+KFDSFM  Q Y K  SD 
Sbjct: 931  DLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDP 990

Query: 90   CVFLQRFPDRDFIVLLLYVDDMLIVG 13
            CV+ +RF + +FI+LLLYVDDMLIVG
Sbjct: 991  CVYFKRFSENNFIILLLYVDDMLIVG 1016


>gb|ACZ36925.1| reverse transcriptase, partial [Prunus mume]
          Length = 89

 Score =  137 bits (346), Expect = 7e-31
 Identities = 62/83 (74%), Positives = 73/83 (87%)
 Frame = -2

Query: 270 DLEEDVYMDQPEGFEVKGKEHLVCKLIKSLYGLKQAPRQWYIKFDSFMAKQEYKKPASDH 91
           DLEE++YM+QPEGF+VKGKE LVC+L KSLYGLKQAPRQWY KFDSFM K  Y++  SDH
Sbjct: 7   DLEEEIYMEQPEGFKVKGKEDLVCRLKKSLYGLKQAPRQWYKKFDSFMIKHRYQRTTSDH 66

Query: 90  CVFLQRFPDRDFIVLLLYVDDML 22
           CVF++RF D +FI+LLLYVDDML
Sbjct: 67  CVFVKRFDDGEFIILLLYVDDML 89