BLASTX nr result

ID: Coptis24_contig00026965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026965
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263493.1| PREDICTED: chromatin structure-remodeling co...   176   6e-61
emb|CBI38025.3| unnamed protein product [Vitis vinifera]              176   6e-61
ref|XP_004148528.1| PREDICTED: BAH and coiled-coil domain-contai...   173   6e-60
ref|XP_004145431.1| PREDICTED: BAH and coiled-coil domain-contai...   170   7e-58
ref|NP_001236094.1| uncharacterized protein LOC100526926 [Glycin...   163   2e-57

>ref|XP_002263493.1| PREDICTED: chromatin structure-remodeling complex subunit RSC1-like
           [Vitis vinifera]
          Length = 224

 Score =  176 bits (447), Expect(2) = 6e-61
 Identities = 82/108 (75%), Positives = 94/108 (87%)
 Frame = -2

Query: 535 MARPRLPPKSLDSYTVKSINKTITVGDCVLMRPAENSKLPYVAKIEKIETDTRNQVKVHV 356
           MA+ R P ++LDSYT+KSINKTI  GDCVLMRP+++SK  YVAK+EKIE+D R  VKVHV
Sbjct: 10  MAKARAPRRTLDSYTIKSINKTIRAGDCVLMRPSDSSKPSYVAKVEKIESDGRGSVKVHV 69

Query: 355 RWYYRPEESIGGRRPFHGSKELFLSDHLDIQSADTIEGICVVHSFKSY 212
           RWYYRPEESIGGRR FHGSKE+FLSDH D+QSADTIEG C VH+FKSY
Sbjct: 70  RWYYRPEESIGGRRQFHGSKEVFLSDHYDVQSADTIEGKCTVHTFKSY 117



 Score = 83.6 bits (205), Expect(2) = 6e-61
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = -1

Query: 134 HSFKSYIKLDAIGTEDYFSRFEYNSITGAFNPDRVAVFCKCEMP 3
           H+FKSY KLDA+G +D+F RFEYNS TGAFNPDRVAV+CKCEMP
Sbjct: 112 HTFKSYTKLDAVGNDDFFCRFEYNSSTGAFNPDRVAVYCKCEMP 155


>emb|CBI38025.3| unnamed protein product [Vitis vinifera]
          Length = 215

 Score =  176 bits (447), Expect(2) = 6e-61
 Identities = 82/108 (75%), Positives = 94/108 (87%)
 Frame = -2

Query: 535 MARPRLPPKSLDSYTVKSINKTITVGDCVLMRPAENSKLPYVAKIEKIETDTRNQVKVHV 356
           MA+ R P ++LDSYT+KSINKTI  GDCVLMRP+++SK  YVAK+EKIE+D R  VKVHV
Sbjct: 1   MAKARAPRRTLDSYTIKSINKTIRAGDCVLMRPSDSSKPSYVAKVEKIESDGRGSVKVHV 60

Query: 355 RWYYRPEESIGGRRPFHGSKELFLSDHLDIQSADTIEGICVVHSFKSY 212
           RWYYRPEESIGGRR FHGSKE+FLSDH D+QSADTIEG C VH+FKSY
Sbjct: 61  RWYYRPEESIGGRRQFHGSKEVFLSDHYDVQSADTIEGKCTVHTFKSY 108



 Score = 83.6 bits (205), Expect(2) = 6e-61
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = -1

Query: 134 HSFKSYIKLDAIGTEDYFSRFEYNSITGAFNPDRVAVFCKCEMP 3
           H+FKSY KLDA+G +D+F RFEYNS TGAFNPDRVAV+CKCEMP
Sbjct: 103 HTFKSYTKLDAVGNDDFFCRFEYNSSTGAFNPDRVAVYCKCEMP 146


>ref|XP_004148528.1| PREDICTED: BAH and coiled-coil domain-containing protein 1-like
           [Cucumis sativus] gi|449516389|ref|XP_004165229.1|
           PREDICTED: BAH and coiled-coil domain-containing protein
           1-like [Cucumis sativus]
          Length = 216

 Score =  173 bits (439), Expect(2) = 6e-60
 Identities = 84/109 (77%), Positives = 93/109 (85%), Gaps = 1/109 (0%)
 Frame = -2

Query: 535 MARPRLPPKSLDSYTVKSINKTITVGDCVLMRPAENSKLPYVAKIEKIETDTRN-QVKVH 359
           MA+P+ P ++LDSYTVK INKTI  GDCVLMRP+E SK  YVAKIEKIE D+R   VKVH
Sbjct: 1   MAKPKAPRQTLDSYTVKRINKTIKAGDCVLMRPSEPSKPSYVAKIEKIEADSRGANVKVH 60

Query: 358 VRWYYRPEESIGGRRPFHGSKELFLSDHLDIQSADTIEGICVVHSFKSY 212
           VRWYYRPEESIGGRR FHGSKELFLSDH D+QSADTIEG C VH+FK+Y
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKELFLSDHFDVQSADTIEGKCTVHTFKNY 109



 Score = 83.2 bits (204), Expect(2) = 6e-60
 Identities = 34/44 (77%), Positives = 40/44 (90%)
 Frame = -1

Query: 134 HSFKSYIKLDAIGTEDYFSRFEYNSITGAFNPDRVAVFCKCEMP 3
           H+FK+Y KLDA+G +DYF RF+YNS TGAFNPDRVAV+CKCEMP
Sbjct: 104 HTFKNYTKLDAVGNDDYFCRFDYNSTTGAFNPDRVAVYCKCEMP 147


>ref|XP_004145431.1| PREDICTED: BAH and coiled-coil domain-containing protein 1-like
           [Cucumis sativus] gi|449487648|ref|XP_004157731.1|
           PREDICTED: BAH and coiled-coil domain-containing protein
           1-like [Cucumis sativus]
          Length = 216

 Score =  170 bits (431), Expect(2) = 7e-58
 Identities = 77/108 (71%), Positives = 90/108 (83%)
 Frame = -2

Query: 535 MARPRLPPKSLDSYTVKSINKTITVGDCVLMRPAENSKLPYVAKIEKIETDTRNQVKVHV 356
           MA+ + P K LDSYT+++ NK +  GDCVLMRP+E SKLPYVA +EKIE D RN +KV V
Sbjct: 1   MAKTKPPKKDLDSYTIRATNKIVRAGDCVLMRPSETSKLPYVALVEKIEADNRNNIKVRV 60

Query: 355 RWYYRPEESIGGRRPFHGSKELFLSDHLDIQSADTIEGICVVHSFKSY 212
           RWYYRPEESIGGRR FHG+KELFLSDH D+QSA TIEG C+VHSFK+Y
Sbjct: 61  RWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHSFKNY 108



 Score = 79.3 bits (194), Expect(2) = 7e-58
 Identities = 33/44 (75%), Positives = 38/44 (86%)
 Frame = -1

Query: 134 HSFKSYIKLDAIGTEDYFSRFEYNSITGAFNPDRVAVFCKCEMP 3
           HSFK+Y KLD +G EDY+SRFEY + TGAF PDRVAV+CKCEMP
Sbjct: 103 HSFKNYTKLDNVGAEDYYSRFEYKAATGAFTPDRVAVYCKCEMP 146


>ref|NP_001236094.1| uncharacterized protein LOC100526926 [Glycine max]
           gi|255631163|gb|ACU15947.1| unknown [Glycine max]
          Length = 216

 Score =  163 bits (413), Expect(2) = 2e-57
 Identities = 77/109 (70%), Positives = 92/109 (84%), Gaps = 1/109 (0%)
 Frame = -2

Query: 535 MARPRLPPKSLDSYTVKSINKTITVGDCVLMRPAENSKLPYVAKIEKIETDTR-NQVKVH 359
           MA+P+ P ++L+SY+VK I+KTI  GDCVLMRP++ SK  YVA+IE+IE D R + VK+H
Sbjct: 1   MAKPKAPRRTLESYSVKHISKTIRAGDCVLMRPSDLSKPSYVARIERIEADARGSNVKIH 60

Query: 358 VRWYYRPEESIGGRRPFHGSKELFLSDHLDIQSADTIEGICVVHSFKSY 212
           VRWYYRPEESIGGRR FHGSKE+FLSDH D+QSADTIE  C VHSFKSY
Sbjct: 61  VRWYYRPEESIGGRRQFHGSKEVFLSDHFDVQSADTIEAKCTVHSFKSY 109



 Score = 84.7 bits (208), Expect(2) = 2e-57
 Identities = 36/44 (81%), Positives = 40/44 (90%)
 Frame = -1

Query: 134 HSFKSYIKLDAIGTEDYFSRFEYNSITGAFNPDRVAVFCKCEMP 3
           HSFKSY KLDA+G +D+F RFEYNS TGAFNPDRVAV+CKCEMP
Sbjct: 104 HSFKSYTKLDAVGNDDFFCRFEYNSSTGAFNPDRVAVYCKCEMP 147


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