BLASTX nr result

ID: Coptis24_contig00026960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026960
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276354.1| PREDICTED: probable inactive receptor kinase...   140   1e-31
ref|XP_002532041.1| receptor protein kinase, putative [Ricinus c...   131   5e-29
ref|XP_002307121.1| predicted protein [Populus trichocarpa] gi|2...   121   5e-26
ref|XP_002310597.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|NP_196564.1| putative inactive receptor kinase [Arabidopsis ...   111   7e-23

>ref|XP_002276354.1| PREDICTED: probable inactive receptor kinase At5g10020 [Vitis
           vinifera] gi|296082489|emb|CBI21494.3| unnamed protein
           product [Vitis vinifera]
          Length = 1065

 Score =  140 bits (352), Expect = 1e-31
 Identities = 76/107 (71%), Positives = 82/107 (76%)
 Frame = +2

Query: 2   SLVGDLPVALGISSRLSEVDLSSNQLSGFIPSRFLTIQTLTNLNLSGNQFSGPIPFPGSH 181
           SLVG LP  LG  SRLS VDLSSN L+G IPS F T  TLT+LNLSGN F G IPF GSH
Sbjct: 405 SLVGILPSGLGAYSRLSAVDLSSNNLNGPIPSSFFTSTTLTSLNLSGNNFVGSIPFQGSH 464

Query: 182 TTELLVLPSSPQIESLDLSSNSLTGSLPSDIGNMGRLKLFDLGKNGL 322
            +ELLVLPS   +ESLDLS N LTG+LPSDIGNMGRLKL +L KN L
Sbjct: 465 ESELLVLPSYLPLESLDLSRNFLTGNLPSDIGNMGRLKLLNLAKNSL 511


>ref|XP_002532041.1| receptor protein kinase, putative [Ricinus communis]
           gi|223528284|gb|EEF30331.1| receptor protein kinase,
           putative [Ricinus communis]
          Length = 1068

 Score =  131 bits (330), Expect = 5e-29
 Identities = 71/107 (66%), Positives = 78/107 (72%)
 Frame = +2

Query: 2   SLVGDLPVALGISSRLSEVDLSSNQLSGFIPSRFLTIQTLTNLNLSGNQFSGPIPFPGSH 181
           SL G+LP   G SS LS +DLS NQLSG IPS F T   LTNLNLS NQF+GPIP  GSH
Sbjct: 410 SLEGNLPPQWGASSGLSAIDLSLNQLSGTIPSGFFTSMALTNLNLSRNQFTGPIPLQGSH 469

Query: 182 TTELLVLPSSPQIESLDLSSNSLTGSLPSDIGNMGRLKLFDLGKNGL 322
             ELLVLPS P+I+SLDLS NSL+G L SDIGNM  LKL +L  N L
Sbjct: 470 VGELLVLPSYPKIDSLDLSHNSLSGGLVSDIGNMASLKLLNLSNNDL 516


>ref|XP_002307121.1| predicted protein [Populus trichocarpa] gi|222856570|gb|EEE94117.1|
           predicted protein [Populus trichocarpa]
          Length = 1053

 Score =  121 bits (304), Expect = 5e-26
 Identities = 68/107 (63%), Positives = 74/107 (69%)
 Frame = +2

Query: 2   SLVGDLPVALGISSRLSEVDLSSNQLSGFIPSRFLTIQTLTNLNLSGNQFSGPIPFPGSH 181
           SL G+LP  L   S LS VDLS NQL+G IP  F T  TLTNLNLSGNQFSGPIP  GS 
Sbjct: 398 SLKGNLPPQLWDISTLSSVDLSLNQLNGPIPGSFFTSLTLTNLNLSGNQFSGPIPVQGSG 457

Query: 182 TTELLVLPSSPQIESLDLSSNSLTGSLPSDIGNMGRLKLFDLGKNGL 322
             ELLVLPS P +ESLD+S NSL+G LPS IGN   LK  +L  N L
Sbjct: 458 AGELLVLPSYPLMESLDVSQNSLSGPLPSGIGNFANLKSLNLSHNNL 504


>ref|XP_002310597.1| predicted protein [Populus trichocarpa] gi|222853500|gb|EEE91047.1|
           predicted protein [Populus trichocarpa]
          Length = 1056

 Score =  117 bits (292), Expect = 1e-24
 Identities = 65/107 (60%), Positives = 72/107 (67%)
 Frame = +2

Query: 2   SLVGDLPVALGISSRLSEVDLSSNQLSGFIPSRFLTIQTLTNLNLSGNQFSGPIPFPGSH 181
           SL G+LP  LG  S  S VDLS NQ +G IP  F T  TL NLNLSGN+FSGPIPF  S 
Sbjct: 398 SLDGNLPAQLGDLSTSSSVDLSLNQFNGPIPGGFFTSLTLMNLNLSGNRFSGPIPFQDSG 457

Query: 182 TTELLVLPSSPQIESLDLSSNSLTGSLPSDIGNMGRLKLFDLGKNGL 322
             ELLVLPS P +ESLDLS NSL+G LPS IGN   L+  +L  N L
Sbjct: 458 AGELLVLPSYPLMESLDLSQNSLSGILPSGIGNFANLRSLNLSNNNL 504



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 37/106 (34%), Positives = 50/106 (47%)
 Frame = +2

Query: 2   SLVGDLPVALGISSRLSEVDLSSNQLSGFIPSRFLTIQTLTNLNLSGNQFSGPIPFPGSH 181
           +  G +  ALG  S L  +DLS+N  SG IP R + +  L  LNLS N F G  P     
Sbjct: 105 NFTGRIVPALGSMSSLQYLDLSNNNFSGPIPGRIVELWNLKYLNLSMNGFEGRFPVGSP- 163

Query: 182 TTELLVLPSSPQIESLDLSSNSLTGSLPSDIGNMGRLKLFDLGKNG 319
               +   +  Q+  LDLS NS  G +   +  +  L+  DL  NG
Sbjct: 164 ----VGFRNLQQLRVLDLSCNSFWGDISGVLSELINLERVDLSDNG 205


>ref|NP_196564.1| putative inactive receptor kinase [Arabidopsis thaliana]
           gi|193806638|sp|Q0WR59.2|Y5020_ARATH RecName:
           Full=Probable inactive receptor kinase At5g10020; Flags:
           Precursor gi|224589667|gb|ACN59365.1| leucine-rich
           repeat receptor-like protein kinase [Arabidopsis
           thaliana] gi|332004099|gb|AED91482.1| putative inactive
           receptor kinase [Arabidopsis thaliana]
          Length = 1048

 Score =  111 bits (277), Expect = 7e-23
 Identities = 60/107 (56%), Positives = 73/107 (68%)
 Frame = +2

Query: 2   SLVGDLPVALGISSRLSEVDLSSNQLSGFIPSRFLTIQTLTNLNLSGNQFSGPIPFPGSH 181
           S+ G LP   G  S+ S +DLSSN+ SGFIP  F T  +L +LNLS N   GPIPF GS 
Sbjct: 399 SVSGSLPSLWG-DSQFSVIDLSSNKFSGFIPVSFFTFASLRSLNLSRNNLEGPIPFRGSR 457

Query: 182 TTELLVLPSSPQIESLDLSSNSLTGSLPSDIGNMGRLKLFDLGKNGL 322
            +ELLVL S PQ+E LDLS+NSLTG LP DIG M ++K+ +L  N L
Sbjct: 458 ASELLVLNSYPQMELLDLSTNSLTGMLPGDIGTMEKIKVLNLANNKL 504


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