BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026951
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...   250   2e-64
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...   250   3e-64
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   243   2e-62
gb|EEE66599.1| hypothetical protein OsJ_23164 [Oryza sativa Japo...   243   2e-62
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta...   243   3e-62

>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
            gi|7267666|emb|CAB78094.1| RNA-directed DNA
            polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score =  250 bits (639), Expect = 2e-64
 Identities = 118/253 (46%), Positives = 171/253 (67%)
 Frame = -3

Query: 759  LPIWNTVKSMGTLKAPGPDGFQGVFFQKYWDIIREDINNAVKYFFTFATLTPCINESFIT 580
            L I   + S+   KAPGPDGF   FF  YWDII  D++  ++ FF  + L+P +NE+ +T
Sbjct: 372  LEIKEALFSISADKAPGPDGFSASFFHAYWDIIEADVSRDIRSFFVDSCLSPRLNETHVT 431

Query: 579  LIPKIPNPDHISKFRPISLCNFTYKICSKILATRLKSHLHKFISPLQGAFVKGRSIGDNI 400
            LIPKI  P  +S +RPI+LCN  YKI +KIL  RL+  L + IS  Q AFV GR+I DN+
Sbjct: 432  LIPKISAPRKVSDYRPIALCNVQYKIVAKILTRRLQPWLSELISLHQSAFVPGRAIADNV 491

Query: 399  GLASEVLHNMKRMKKQKQGWMAVKLDMAKAFDRVEWCFVDQIMGKLGFSAKWRRLIQQCI 220
             +  E+LH ++    +K   MA+K DM+KA+DR++W F+ +++ +LGF  KW R + QC+
Sbjct: 492  LITHEILHFLRVSGAKKYCSMAIKTDMSKAYDRIKWNFLQEVLMRLGFHDKWIRWVMQCV 551

Query: 219  STVSYNVLLNGTPLDKVYPERGIRQGDPLSPYLYILVAEAFSRLLAQAEDEKILTGIKIR 40
             TVSY+ L+NG+P   V P RG+RQGDPLSPYL+IL  E  S L  +A+++ ++ GI++ 
Sbjct: 552  CTVSYSFLINGSPQGSVVPSRGLRQGDPLSPYLFILCTEVLSGLCRKAQEKGVMVGIRVA 611

Query: 39   RNAPGISHLFYAD 1
            R +P ++HL +AD
Sbjct: 612  RGSPQVNHLLFAD 624


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score =  250 bits (638), Expect = 3e-64
 Identities = 117/251 (46%), Positives = 168/251 (66%)
 Frame = -3

Query: 753 IWNTVKSMGTLKAPGPDGFQGVFFQKYWDIIREDINNAVKYFFTFATLTPCINESFITLI 574
           IWN + ++G LKAPG DG   +F++K+W ++ + +   V        +    N++ I LI
Sbjct: 14  IWNALDNIGDLKAPGADGIPSIFYKKFWSVVGDQVKKEVLAVLNGGPIPEGWNDTIIVLI 73

Query: 573 PKIPNPDHISKFRPISLCNFTYKICSKILATRLKSHLHKFISPLQGAFVKGRSIGDNIGL 394
           PK   P  +   RPISLCN  YK+ SK+LA RLK  L   IS  Q AFV GR I DN+ L
Sbjct: 74  PKTNTPQMLKDLRPISLCNVLYKLISKVLANRLKKILPNIISNSQSAFVPGRLITDNVLL 133

Query: 393 ASEVLHNMKRMKKQKQGWMAVKLDMAKAFDRVEWCFVDQIMGKLGFSAKWRRLIQQCIST 214
           A E++H++K +KK   G  A+KLDM+KA+DRVEW F++ +M K+GF  KW +LI +C++T
Sbjct: 134 AYEIVHHLKSIKKGAGGLAAIKLDMSKAYDRVEWSFLENMMRKMGFDEKWVQLIMKCVTT 193

Query: 213 VSYNVLLNGTPLDKVYPERGIRQGDPLSPYLYILVAEAFSRLLAQAEDEKILTGIKIRRN 34
           V+Y + +N +   K++P+RG+RQGDPLSPYL+I+ AE  S +L +AE +  + GIKI R 
Sbjct: 194 VTYKIKVNDSYTQKIFPQRGLRQGDPLSPYLFIICAEGLSAMLQKAEQKGKIEGIKICRG 253

Query: 33  APGISHLFYAD 1
           AP ++HLF+AD
Sbjct: 254 APKVNHLFFAD 264


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  243 bits (621), Expect = 2e-62
 Identities = 117/251 (46%), Positives = 164/251 (65%)
 Frame = -3

Query: 753  IWNTVKSMGTLKAPGPDGFQGVFFQKYWDIIREDINNAVKYFFTFATLTPCINESFITLI 574
            ++  +  M   KAPGPDG   +F+QK+W II +D+   V      +    CIN + I LI
Sbjct: 437  LYVALSQMHPCKAPGPDGMHAIFYQKFWHIIGDDVTQFVSSILHGSISPSCINHTNIALI 496

Query: 573  PKIPNPDHISKFRPISLCNFTYKICSKILATRLKSHLHKFISPLQGAFVKGRSIGDNIGL 394
            PK+ NP   ++FRPI+LCN  YK+ SK L  RLK  L + +S  Q AFV GR I DN  +
Sbjct: 497  PKVKNPTTPAEFRPIALCNVVYKLVSKALVIRLKDFLPRLVSENQSAFVPGRLITDNALI 556

Query: 393  ASEVLHNMKRMKKQKQGWMAVKLDMAKAFDRVEWCFVDQIMGKLGFSAKWRRLIQQCIST 214
            A EV H+MK   + ++G +A+KLDM+KA+DRVEW F+ +++  +GF  +W  LI  C+S+
Sbjct: 557  AMEVFHSMKHRNRSRKGTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLIMSCVSS 616

Query: 213  VSYNVLLNGTPLDKVYPERGIRQGDPLSPYLYILVAEAFSRLLAQAEDEKILTGIKIRRN 34
            VSY+ ++NG     V P RG+R GDPLSPYL+IL+A+AFS+++ +   EK L G K  R+
Sbjct: 617  VSYSFIINGGVCGSVTPARGLRHGDPLSPYLFILIADAFSKMIQKKVQEKQLHGAKASRS 676

Query: 33   APGISHLFYAD 1
             P ISHLF+AD
Sbjct: 677  GPVISHLFFAD 687


>gb|EEE66599.1| hypothetical protein OsJ_23164 [Oryza sativa Japonica Group]
          Length = 813

 Score =  243 bits (621), Expect = 2e-62
 Identities = 120/244 (49%), Positives = 163/244 (66%)
 Frame = -3

Query: 732  MGTLKAPGPDGFQGVFFQKYWDIIREDINNAVKYFFTFATLTPCINESFITLIPKIPNPD 553
            +G +KAPGPDGF   FFQ+ WD I++D+ +AVK FF  + +   +N++ I LIPK+  P 
Sbjct: 514  IGPIKAPGPDGFPARFFQRNWDAIKKDVVSAVKSFFETSIMPEGVNDTAIVLIPKVDQPM 573

Query: 552  HISKFRPISLCNFTYKICSKILATRLKSHLHKFISPLQGAFVKGRSIGDNIGLASEVLHN 373
             +  FRPISLCN  YKI SK L  RL+  L + +S  Q AFV GR I DN  LA E  H 
Sbjct: 574  ELKDFRPISLCNVIYKIVSKCLVNRLRPILDELVSQNQSAFVPGRMITDNALLAFECFHF 633

Query: 372  MKRMKKQKQGWMAVKLDMAKAFDRVEWCFVDQIMGKLGFSAKWRRLIQQCISTVSYNVLL 193
            ++R K   +   A KLD++KA+DRV+W F++Q M KLGF+ +W + I  C+S+V Y++  
Sbjct: 634  IQRNKNANKAACAYKLDLSKAYDRVDWVFLEQTMCKLGFAPRWIKWIMTCLSSVRYSIKF 693

Query: 192  NGTPLDKVYPERGIRQGDPLSPYLYILVAEAFSRLLAQAEDEKILTGIKIRRNAPGISHL 13
            NGT LD   P RG+RQGDPLSP+L++ VA+ FSRL+ +      +T +KI R APGISHL
Sbjct: 694  NGTLLDTFAPSRGLRQGDPLSPFLFLFVADGFSRLMEERVAAGDITPVKICRGAPGISHL 753

Query: 12   FYAD 1
             +AD
Sbjct: 754  LFAD 757


>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1715

 Score =  243 bits (620), Expect = 3e-62
 Identities = 118/249 (47%), Positives = 173/249 (69%)
 Frame = -3

Query: 747  NTVKSMGTLKAPGPDGFQGVFFQKYWDIIREDINNAVKYFFTFATLTPCINESFITLIPK 568
            + V ++G  +APG DGF   F+   WD+I  D+   V++FF    +   IN++ I LIPK
Sbjct: 797  DAVFAIGADRAPGFDGFTAAFYHHLWDLIGNDVCLMVRHFFESDVMDNQINQTQICLIPK 856

Query: 567  IPNPDHISKFRPISLCNFTYKICSKILATRLKSHLHKFISPLQGAFVKGRSIGDNIGLAS 388
            I +P H+S +RPISLC  +YKI SKIL  RLK  L   IS  Q AFV G++I DN+ +A 
Sbjct: 857  IIDPKHMSDYRPISLCTASYKIISKILIKRLKQCLGDVISDSQAAFVPGQNISDNVLVAH 916

Query: 387  EVLHNMKRMKKQKQGWMAVKLDMAKAFDRVEWCFVDQIMGKLGFSAKWRRLIQQCISTVS 208
            E+LH++K  ++ + G++AVK D++KA+DRVEW F++++M +LGF+ +W + I  C+++VS
Sbjct: 917  ELLHSLKSRRECQSGYVAVKTDISKAYDRVEWNFLEKVMIQLGFAPRWVKWIMTCVTSVS 976

Query: 207  YNVLLNGTPLDKVYPERGIRQGDPLSPYLYILVAEAFSRLLAQAEDEKILTGIKIRRNAP 28
            Y VL+NG+P  K++P RGIRQGDPLSPYL++  AE  S +L +AE  K + G+KI ++  
Sbjct: 977  YEVLINGSPYGKIFPSRGIRQGDPLSPYLFLFCAEVLSNMLRKAEVNKQIHGMKITKDCL 1036

Query: 27   GISHLFYAD 1
             ISHL +AD
Sbjct: 1037 AISHLLFAD 1045