BLASTX nr result

ID: Coptis24_contig00026947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026947
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302897.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-45
ref|XP_004141651.1| PREDICTED: fanconi-associated nuclease 1 hom...   184   9e-45
emb|CBI39437.3| unnamed protein product [Vitis vinifera]              182   3e-44
ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 hom...   182   3e-44
ref|XP_003621733.1| Coiled-coil domain-containing protein MTMR15...   182   6e-44

>ref|XP_002302897.1| predicted protein [Populus trichocarpa] gi|222844623|gb|EEE82170.1|
            predicted protein [Populus trichocarpa]
          Length = 1028

 Score =  187 bits (476), Expect = 1e-45
 Identities = 88/99 (88%), Positives = 90/99 (90%)
 Frame = -1

Query: 623  GTSCRGVNWDRHSLADLRAAVTCVGGPCLASLCRLLAQDYGSWSRGMPDLFLWRFVGEYT 444
            GT+CRGVNWDRHSL +LRAAVTCVGGPCLASLCR LAQDY SWS GMPDL LWRF GEY 
Sbjct: 924  GTACRGVNWDRHSLPELRAAVTCVGGPCLASLCRHLAQDYRSWSSGMPDLLLWRFHGEYK 983

Query: 443  GEAKLVEVKGPRDRLSEQQRAWLLLLMDCGFNAEVCKVS 327
            GEAKLVEVKGPRD LSEQQRAWLLLLMDCGFN EVCKVS
Sbjct: 984  GEAKLVEVKGPRDCLSEQQRAWLLLLMDCGFNTEVCKVS 1022


>ref|XP_004141651.1| PREDICTED: fanconi-associated nuclease 1 homolog [Cucumis sativus]
            gi|449506836|ref|XP_004162862.1| PREDICTED:
            fanconi-associated nuclease 1 homolog [Cucumis sativus]
          Length = 949

 Score =  184 bits (468), Expect = 9e-45
 Identities = 83/100 (83%), Positives = 91/100 (91%)
 Frame = -1

Query: 623  GTSCRGVNWDRHSLADLRAAVTCVGGPCLASLCRLLAQDYGSWSRGMPDLFLWRFVGEYT 444
            GTSC GVNWDRHSLA+LRAAVTC+GGPC+ASLCR LAQDY SWS GMPDL LWRF  EY+
Sbjct: 849  GTSCNGVNWDRHSLAELRAAVTCIGGPCMASLCRHLAQDYRSWSSGMPDLLLWRFNSEYS 908

Query: 443  GEAKLVEVKGPRDRLSEQQRAWLLLLMDCGFNAEVCKVSP 324
            GEAKLVEVKGP+DRLSEQQRAW+LLLMDCGF  EVCK++P
Sbjct: 909  GEAKLVEVKGPKDRLSEQQRAWILLLMDCGFIIEVCKITP 948


>emb|CBI39437.3| unnamed protein product [Vitis vinifera]
          Length = 951

 Score =  182 bits (463), Expect = 3e-44
 Identities = 84/101 (83%), Positives = 90/101 (89%)
 Frame = -1

Query: 626  VGTSCRGVNWDRHSLADLRAAVTCVGGPCLASLCRLLAQDYGSWSRGMPDLFLWRFVGEY 447
            VG +CRGVNWDRHSL++LRAAVTC+GGPCLAS+CR LAQDY SWS GMPDL LWRF  +Y
Sbjct: 848  VGVACRGVNWDRHSLSELRAAVTCIGGPCLASICRHLAQDYRSWSSGMPDLLLWRFHEDY 907

Query: 446  TGEAKLVEVKGPRDRLSEQQRAWLLLLMDCGFNAEVCKVSP 324
             GEAKLVEVKGPRDRLSEQQRAWLLLLMD GFN EVCKV P
Sbjct: 908  KGEAKLVEVKGPRDRLSEQQRAWLLLLMDYGFNVEVCKVGP 948


>ref|XP_002265776.1| PREDICTED: fanconi-associated nuclease 1 homolog [Vitis vinifera]
          Length = 955

 Score =  182 bits (463), Expect = 3e-44
 Identities = 84/101 (83%), Positives = 90/101 (89%)
 Frame = -1

Query: 626  VGTSCRGVNWDRHSLADLRAAVTCVGGPCLASLCRLLAQDYGSWSRGMPDLFLWRFVGEY 447
            VG +CRGVNWDRHSL++LRAAVTC+GGPCLAS+CR LAQDY SWS GMPDL LWRF  +Y
Sbjct: 852  VGVACRGVNWDRHSLSELRAAVTCIGGPCLASICRHLAQDYRSWSSGMPDLLLWRFHEDY 911

Query: 446  TGEAKLVEVKGPRDRLSEQQRAWLLLLMDCGFNAEVCKVSP 324
             GEAKLVEVKGPRDRLSEQQRAWLLLLMD GFN EVCKV P
Sbjct: 912  KGEAKLVEVKGPRDRLSEQQRAWLLLLMDYGFNVEVCKVGP 952


>ref|XP_003621733.1| Coiled-coil domain-containing protein MTMR15 [Medicago truncatula]
            gi|355496748|gb|AES77951.1| Coiled-coil domain-containing
            protein MTMR15 [Medicago truncatula]
          Length = 922

 Score =  182 bits (461), Expect = 6e-44
 Identities = 83/100 (83%), Positives = 88/100 (88%)
 Frame = -1

Query: 623  GTSCRGVNWDRHSLADLRAAVTCVGGPCLASLCRLLAQDYGSWSRGMPDLFLWRFVGEYT 444
            GTSCRGVNWDRHSL +LRAAVTCVGG CLAS C LL +DY SWS GMPDL LWRF GEY+
Sbjct: 822  GTSCRGVNWDRHSLDELRAAVTCVGGSCLASFCLLLCEDYRSWSSGMPDLLLWRFCGEYS 881

Query: 443  GEAKLVEVKGPRDRLSEQQRAWLLLLMDCGFNAEVCKVSP 324
            GEAKLVEVKGP+DRLSEQQRAWLL+LMDCGF  EVCKV P
Sbjct: 882  GEAKLVEVKGPKDRLSEQQRAWLLMLMDCGFMVEVCKVKP 921


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