BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026938
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA92033.1| retrotransposon protein, putative, Ty1-copia subc...    74   4e-26
emb|CAD39862.2| OSJNBa0036B17.5 [Oryza sativa Japonica Group]          74   1e-25
emb|CAN76956.1| hypothetical protein VITISV_022305 [Vitis vinifera]    80   2e-25
emb|CAN69007.1| hypothetical protein VITISV_040724 [Vitis vinifera]    77   2e-25
gb|AAP50929.1| putative polyprotein [Oryza sativa Japonica Group]      72   4e-25

>gb|ABA92033.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1263

 Score = 73.9 bits (180), Expect(2) = 4e-26
 Identities = 35/52 (67%), Positives = 43/52 (82%)
 Frame = +3

Query: 210  YVFLSGNAAIC*HSTKQTLVATSSNHSEILALHEASRECVWLRLLIGHIRSS 365
            +VFL G  AI   S+KQTLVATS+NHSEI+AL+EASRECVWLR ++ HI +S
Sbjct: 1126 FVFLQGGTAISWKSSKQTLVATSTNHSEIIALYEASRECVWLRRMVNHILTS 1177



 Score = 68.9 bits (167), Expect(2) = 4e-26
 Identities = 34/74 (45%), Positives = 43/74 (58%)
 Frame = +1

Query: 1    ITFSISFLSRYNCAHTLRYWNDVKHILRYFYGITSMKLFYSYGSTNDYDLVGYAVFGYLS 180
            I FS++ L+RY+ A T R+W  VK+I RY  G   + LF+      D  L+GY   GYLS
Sbjct: 1058 IAFSVNLLARYSAAPTKRHWTGVKNIFRYLNGTRDLGLFFK--KNQDSTLIGYTDAGYLS 1115

Query: 181  DPQKGHSQTGMYFL 222
            DP    SQTG  FL
Sbjct: 1116 DPHNARSQTGFVFL 1129


>emb|CAD39862.2| OSJNBa0036B17.5 [Oryza sativa Japonica Group]
          Length = 443

 Score = 73.9 bits (180), Expect(2) = 1e-25
 Identities = 35/52 (67%), Positives = 43/52 (82%)
 Frame = +3

Query: 210 YVFLSGNAAIC*HSTKQTLVATSSNHSEILALHEASRECVWLRLLIGHIRSS 365
           +VFL G  AI   S+KQTLVATS+NHSEI+AL+EASRECVWLR ++ HI +S
Sbjct: 290 FVFLQGGTAISWKSSKQTLVATSTNHSEIIALYEASRECVWLRRMVNHILTS 341



 Score = 67.4 bits (163), Expect(2) = 1e-25
 Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
 Frame = +1

Query: 1   ITFSISFLSRYNCAHTLRYWNDVKHILRYFYGITSMKLFY--SYGSTNDYDLVGYAVFGY 174
           I FS++ L+RY+ A T R+W  VK++ RY  G   + LF+  + GST    L+GY   GY
Sbjct: 222 IAFSVNLLARYSAAPTKRHWTGVKNVFRYLNGTRDLGLFFKKNQGST----LIGYTDAGY 277

Query: 175 LSDPQKGHSQTGMYFL 222
           LSDP    SQTG  FL
Sbjct: 278 LSDPHNARSQTGFVFL 293


>emb|CAN76956.1| hypothetical protein VITISV_022305 [Vitis vinifera]
          Length = 973

 Score = 79.7 bits (195), Expect(2) = 2e-25
 Identities = 40/73 (54%), Positives = 47/73 (64%)
 Frame = +1

Query: 1   ITFSISFLSRYNCAHTLRYWNDVKHILRYFYGITSMKLFYSYGSTNDYDLVGYAVFGYLS 180
           I FS++ L+RYN   T R+WN +KHILRY  G T M LFYS  S     L+GYA  GYLS
Sbjct: 751 IAFSVNLLARYNSXPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQ--QLLGYADVGYLS 808

Query: 181 DPQKGHSQTGMYF 219
           +P K  SQTG  F
Sbjct: 809 BPHKDRSQTGYVF 821



 Score = 61.2 bits (147), Expect(2) = 2e-25
 Identities = 31/52 (59%), Positives = 35/52 (67%)
 Frame = +3

Query: 210 YVFLSGNAAIC*HSTKQTLVATSSNHSEILALHEASRECVWLRLLIGHIRSS 365
           YVF     AI     KQT+V TSSNHSEILA+HEAS EC+  R +I HIR S
Sbjct: 819 YVFNCNGTAISWRYVKQTMVXTSSNHSEILAIHEASXECIXXRSMIQHIRES 870


>emb|CAN69007.1| hypothetical protein VITISV_040724 [Vitis vinifera]
          Length = 345

 Score = 77.0 bits (188), Expect(2) = 2e-25
 Identities = 40/73 (54%), Positives = 47/73 (64%)
 Frame = +1

Query: 1   ITFSISFLSRYNCAHTLRYWNDVKHILRYFYGITSMKLFYSYGSTNDYDLVGYAVFGYLS 180
           I FS++ L++Y+ A T R+WN VKHILRYF G   M LFYS  S     L+GYA  GYLS
Sbjct: 179 IAFSVNLLAKYSSAPTRRHWNGVKHILRYFRGTIDMSLFYSRESKQ--QLLGYADAGYLS 236

Query: 181 DPQKGHSQTGMYF 219
           D  KG SQ G  F
Sbjct: 237 DSHKGKSQIGYVF 249



 Score = 63.9 bits (154), Expect(2) = 2e-25
 Identities = 31/52 (59%), Positives = 37/52 (71%)
 Frame = +3

Query: 210 YVFLSGNAAIC*HSTKQTLVATSSNHSEILALHEASRECVWLRLLIGHIRSS 365
           YVF     AI   S KQT+V TSSNH EILA+H+ASRE +WLR +I H+R S
Sbjct: 247 YVFNCDGTAISWRSVKQTMVVTSSNHLEILAIHKASRESIWLRSMIQHLRES 298


>gb|AAP50929.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 639

 Score = 72.4 bits (176), Expect(2) = 4e-25
 Identities = 34/52 (65%), Positives = 43/52 (82%)
 Frame = +3

Query: 210 YVFLSGNAAIC*HSTKQTLVATSSNHSEILALHEASRECVWLRLLIGHIRSS 365
           +VFL G  AI   S+KQTLVATS+NHSEI+AL++ASRECVWLR ++ HI +S
Sbjct: 567 FVFLQGGTAISWKSSKQTLVATSTNHSEIIALYKASRECVWLRSMVNHILTS 618



 Score = 67.4 bits (163), Expect(2) = 4e-25
 Identities = 33/74 (44%), Positives = 42/74 (56%)
 Frame = +1

Query: 1   ITFSISFLSRYNCAHTLRYWNDVKHILRYFYGITSMKLFYSYGSTNDYDLVGYAVFGYLS 180
           I FS+  L+RY+ A T R+W  VK++ RY  G   + LF+      D  L+GY   GYLS
Sbjct: 499 IAFSVKLLARYSAAPTKRHWTGVKNVFRYLNGTRDLGLFFK--KNQDSTLIGYTDAGYLS 556

Query: 181 DPQKGHSQTGMYFL 222
           DP    SQTG  FL
Sbjct: 557 DPHNTRSQTGFVFL 570