BLASTX nr result

ID: Coptis24_contig00026937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026937
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36296.3| unnamed protein product [Vitis vinifera]               60   5e-15
ref|XP_002517611.1| conserved hypothetical protein [Ricinus comm...    57   3e-14
ref|NP_175672.2| O-fucosyltransferase family protein [Arabidopsi...    59   4e-14
ref|XP_002894391.1| hypothetical protein ARALYDRAFT_474388 [Arab...    59   4e-14
ref|XP_002267150.1| PREDICTED: DUF246 domain-containing protein ...    55   2e-13

>emb|CBI36296.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score = 60.5 bits (145), Expect(2) = 5e-15
 Identities = 27/44 (61%), Positives = 31/44 (70%)
 Frame = -1

Query: 237 PFPVNYFYIAPPSSSSTQRKSDIWSVPRLVEWRPCKWWIQGHLT 106
           P P + F ++P S S   RK DIWSV RLVEWRPCKWW+ G LT
Sbjct: 29  PSPFSQFSLSPTSPS---RKFDIWSVRRLVEWRPCKWWLDGDLT 69



 Score = 45.1 bits (105), Expect(2) = 5e-15
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = -2

Query: 71  ALPKLSNGFIRVDCYGGLNQMRR 3
           ALP  +NG+IRVDCYGGLNQMRR
Sbjct: 70  ALPAKNNGYIRVDCYGGLNQMRR 92


>ref|XP_002517611.1| conserved hypothetical protein [Ricinus communis]
           gi|223543243|gb|EEF44775.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 441

 Score = 57.0 bits (136), Expect(2) = 3e-14
 Identities = 26/48 (54%), Positives = 33/48 (68%)
 Frame = -1

Query: 249 PSTTPFPVNYFYIAPPSSSSTQRKSDIWSVPRLVEWRPCKWWIQGHLT 106
           PSTT F      ++ P S  T +  DIWSV R++EWRPCKWW+QGHL+
Sbjct: 28  PSTTSFSSGQ--LSSPDSY-TGKSLDIWSVKRVLEWRPCKWWLQGHLS 72



 Score = 45.8 bits (107), Expect(2) = 3e-14
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = -2

Query: 74  AALPKLSNGFIRVDCYGGLNQMRR 3
           +ALP  SNG++RVDCYGGLNQMRR
Sbjct: 72  SALPAESNGYVRVDCYGGLNQMRR 95


>ref|NP_175672.2| O-fucosyltransferase family protein [Arabidopsis thaliana]
           gi|18491205|gb|AAL69505.1| unknown protein [Arabidopsis
           thaliana] gi|20465295|gb|AAM20051.1| unknown protein
           [Arabidopsis thaliana] gi|332194710|gb|AEE32831.1|
           O-fucosyltransferase family protein [Arabidopsis
           thaliana]
          Length = 439

 Score = 58.9 bits (141), Expect(2) = 4e-14
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = -1

Query: 207 PPSSSSTQRKSDIWSVPRLVEWRPCKWWIQGHLT 106
           P  S S+   SDIWSV R++EWRPCKWW+QGHLT
Sbjct: 35  PFPSGSSVGSSDIWSVKRIMEWRPCKWWLQGHLT 68



 Score = 43.5 bits (101), Expect(2) = 4e-14
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -2

Query: 68  LPKLSNGFIRVDCYGGLNQMRR 3
           LP  +NG+IRVDCYGGLNQMRR
Sbjct: 70  LPAKTNGYIRVDCYGGLNQMRR 91


>ref|XP_002894391.1| hypothetical protein ARALYDRAFT_474388 [Arabidopsis lyrata subsp.
           lyrata] gi|297340233|gb|EFH70650.1| hypothetical protein
           ARALYDRAFT_474388 [Arabidopsis lyrata subsp. lyrata]
          Length = 438

 Score = 58.9 bits (141), Expect(2) = 4e-14
 Identities = 25/33 (75%), Positives = 27/33 (81%)
 Frame = -1

Query: 204 PSSSSTQRKSDIWSVPRLVEWRPCKWWIQGHLT 106
           PS SS    SDIWSV R+VEWRPCKWW+QGHLT
Sbjct: 37  PSGSSVG--SDIWSVKRIVEWRPCKWWLQGHLT 67



 Score = 43.5 bits (101), Expect(2) = 4e-14
 Identities = 18/22 (81%), Positives = 20/22 (90%)
 Frame = -2

Query: 68  LPKLSNGFIRVDCYGGLNQMRR 3
           LP  +NG+IRVDCYGGLNQMRR
Sbjct: 69  LPAKTNGYIRVDCYGGLNQMRR 90


>ref|XP_002267150.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis
           vinifera]
          Length = 476

 Score = 55.5 bits (132), Expect(2) = 2e-13
 Identities = 22/30 (73%), Positives = 24/30 (80%)
 Frame = -1

Query: 195 SSTQRKSDIWSVPRLVEWRPCKWWIQGHLT 106
           +S  RK DIWSV RLVEWRPCKWW+ G LT
Sbjct: 73  TSRSRKFDIWSVRRLVEWRPCKWWLDGDLT 102



 Score = 45.1 bits (105), Expect(2) = 2e-13
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = -2

Query: 71  ALPKLSNGFIRVDCYGGLNQMRR 3
           ALP  +NG+IRVDCYGGLNQMRR
Sbjct: 103 ALPAKNNGYIRVDCYGGLNQMRR 125


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