BLASTX nr result

ID: Coptis24_contig00026932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026932
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16583.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002320705.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
emb|CAN65347.1| hypothetical protein VITISV_000637 [Vitis vinifera]    81   1e-13
ref|XP_004155262.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    79   5e-13
ref|XP_004134284.1| PREDICTED: uncharacterized protein LOC101221...    79   5e-13

>emb|CBI16583.3| unnamed protein product [Vitis vinifera]
          Length = 1331

 Score =  100 bits (248), Expect = 2e-19
 Identities = 70/172 (40%), Positives = 90/172 (52%), Gaps = 14/172 (8%)
 Frame = +2

Query: 5   TKEIVKAEISVL--------VGGKCP------SSRQIPSLAVSATDAQFSASIRPAPISG 142
           T EI+K   S L         GG  P      +S Q    A+S  DA+  + + P+ +SG
Sbjct: 113 TDEILKGAYSALEDEKWLFNAGGGQPVKYKYTASSQRTDQALS-DDAEAGSIMIPSSVSG 171

Query: 143 RPVSLSNIFTSLFVLQDICAMIFEFQQSGHDRDNLFYSTLASLHTTSDYILRRFRGRLMV 322
           +P S  N    LFV+QDI  +I   Q S +DRD +F+STL S+ T SD I R+ RG LMV
Sbjct: 172 KPKSFFNFSNGLFVVQDILNIILTCQHSEYDRDKIFFSTLGSISTISDCIFRKLRGLLMV 231

Query: 323 VSSDCIKHELLAGENVTSPLSKSKDKLCVXXXXXXXXXXNPKKLNSVQKSSG 478
           V  D  K ELL   N+ SP +KSK+KL            N KKLN V +S G
Sbjct: 232 VWLDFTKLELLGEGNLKSPPNKSKEKLGTGGRKKRGRTRNMKKLNPVPRSCG 283


>ref|XP_002320705.1| predicted protein [Populus trichocarpa] gi|222861478|gb|EEE99020.1|
           predicted protein [Populus trichocarpa]
          Length = 1566

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 61/154 (39%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
 Frame = +2

Query: 62  SRQIPSLAVSATDAQFSASIRPAPISGRPVSLSNIFTSLFVLQDICAMIFEFQQSGHDRD 241
           SRQ   L + A DA+F  + +P+  SG+  S +NIF SLFVLQDI +++   Q S +D  
Sbjct: 322 SRQRIFLKLPA-DAEFGLAPKPS-FSGKDASFANIFNSLFVLQDIVSLVLPDQGSEYDTS 379

Query: 242 NLFYSTLASLHTTSDYILRRFRGRLMVVSSDCIKHELLAGENVTSPLSKSKDKLCVXXXX 421
           ++F+S L SL T SD ILR+ RG +MV+S DC + ELL      S  +K  +KL      
Sbjct: 380 HIFFSMLGSLGTLSDCILRKLRGLVMVISLDCTRLELLGEGTSNSSANKPSEKLGAGSRR 439

Query: 422 XXXXXXNPKKL------NSVQKSSGVNHAMENSC 505
                 N KKL       SV +SS    A +  C
Sbjct: 440 KKGKTQNMKKLMNPTPVKSVDESSFKKLAEDIKC 473


>emb|CAN65347.1| hypothetical protein VITISV_000637 [Vitis vinifera]
          Length = 1500

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 65/174 (37%), Positives = 85/174 (48%), Gaps = 14/174 (8%)
 Frame = +2

Query: 5   TKEIVKAEISVL--------VGGKCP------SSRQIPSLAVSATDAQFSASIRPAPISG 142
           T EI+K   S L         GG  P      +S Q    A+S  DA+  + + P+ +SG
Sbjct: 327 TDEILKGAYSALEDEKWLFNAGGGQPVKYKYTASSQRTDQALS-DDAEAGSIMIPSSVSG 385

Query: 143 RPVSLSNIFTSLFVLQDICAMIFEFQQSGHDRDNLFYSTLASLHTTSDYILRRFRGRLMV 322
           +              QDI  +I   Q S +DRD +F+STL S+ T SD I R+ RG LMV
Sbjct: 386 KT-------------QDILNIILTCQHSEYDRDKIFFSTLGSISTISDCIFRKLRGLLMV 432

Query: 323 VSSDCIKHELLAGENVTSPLSKSKDKLCVXXXXXXXXXXNPKKLNSVQKSSGVN 484
           V  D  K ELL   N+ SP +KSK+KL            N KKLN V +S G +
Sbjct: 433 VWLDFTKLELLGEGNLKSPPNKSKEKLGTGXRKKRGKTRNMKKLNPVPRSCGDB 486


>ref|XP_004155262.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101221970
           [Cucumis sativus]
          Length = 1514

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/109 (43%), Positives = 61/109 (55%)
 Frame = +2

Query: 77  SLAVSATDAQFSASIRPAPISGRPVSLSNIFTSLFVLQDICAMIFEFQQSGHDRDNLFYS 256
           S+  S  D     +I P   SG+P  LSNIF +L VLQDI  M+       + + NLFYS
Sbjct: 314 SMLTSQADLHIDFNIIPDTHSGKPYLLSNIFRNLLVLQDIVTMVSSCLHDEYYKCNLFYS 373

Query: 257 TLASLHTTSDYILRRFRGRLMVVSSDCIKHELLAGENVTSPLSKSKDKL 403
           TL S+    D ILR+ R  LM +S DC K ELL   N  S  SKS++++
Sbjct: 374 TLGSICAIPDCILRKLREFLMFISLDCTKFELLGEGNGKSFPSKSREQV 422


>ref|XP_004134284.1| PREDICTED: uncharacterized protein LOC101221970 [Cucumis sativus]
          Length = 1526

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/109 (43%), Positives = 61/109 (55%)
 Frame = +2

Query: 77  SLAVSATDAQFSASIRPAPISGRPVSLSNIFTSLFVLQDICAMIFEFQQSGHDRDNLFYS 256
           S+  S  D     +I P   SG+P  LSNIF +L VLQDI  M+       + + NLFYS
Sbjct: 313 SMLTSQADLHIDFNIIPDTHSGKPYLLSNIFRNLLVLQDIVTMVSSCLHDEYYKCNLFYS 372

Query: 257 TLASLHTTSDYILRRFRGRLMVVSSDCIKHELLAGENVTSPLSKSKDKL 403
           TL S+    D ILR+ R  LM +S DC K ELL   N  S  SKS++++
Sbjct: 373 TLGSICAIPDCILRKLREFLMFISLDCTKFELLGEGNGKSFPSKSREQV 421


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