BLASTX nr result

ID: Coptis24_contig00026927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026927
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26338.3| unnamed protein product [Vitis vinifera]               73   2e-11
ref|XP_002283882.1| PREDICTED: uncharacterized protein LOC100251...    73   2e-11
emb|CAN69150.1| hypothetical protein VITISV_003949 [Vitis vinifera]    73   2e-11
ref|XP_004145374.1| PREDICTED: uncharacterized protein LOC101219...    71   8e-11
gb|AAO29954.1| unknown protein [Arabidopsis thaliana]                  70   1e-10

>emb|CBI26338.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 47/89 (52%), Positives = 57/89 (64%), Gaps = 19/89 (21%)
 Frame = +3

Query: 84  MKIQPIDCE---PTES----SVKPVVKSRFKKLFEWQFSSVLKTSTT------------T 206
           MKIQPID +   P E+    S KPV+KSR K+LF+ QF  VLK S+T             
Sbjct: 5   MKIQPIDIDSHTPRETIRADSGKPVLKSRLKRLFDRQFHGVLKNSSTEKPESQYSKDGGV 64

Query: 207 DLEPISSVCLANLVQNFIEENNERQQTVK 293
           + EP SSVCLA +VQNFIEE+NE+Q TVK
Sbjct: 65  EFEP-SSVCLAKMVQNFIEESNEKQTTVK 92


>ref|XP_002283882.1| PREDICTED: uncharacterized protein LOC100251040 isoform 1 [Vitis
           vinifera] gi|359477588|ref|XP_003632000.1| PREDICTED:
           uncharacterized protein LOC100251040 isoform 2 [Vitis
           vinifera]
          Length = 386

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 47/89 (52%), Positives = 57/89 (64%), Gaps = 19/89 (21%)
 Frame = +3

Query: 84  MKIQPIDCE---PTES----SVKPVVKSRFKKLFEWQFSSVLKTSTT------------T 206
           MKIQPID +   P E+    S KPV+KSR K+LF+ QF  VLK S+T             
Sbjct: 5   MKIQPIDIDSHTPRETIRADSGKPVLKSRLKRLFDRQFHGVLKNSSTEKPESQYSKDGGV 64

Query: 207 DLEPISSVCLANLVQNFIEENNERQQTVK 293
           + EP SSVCLA +VQNFIEE+NE+Q TVK
Sbjct: 65  EFEP-SSVCLAKMVQNFIEESNEKQTTVK 92


>emb|CAN69150.1| hypothetical protein VITISV_003949 [Vitis vinifera]
          Length = 524

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 47/89 (52%), Positives = 57/89 (64%), Gaps = 19/89 (21%)
 Frame = +3

Query: 84  MKIQPIDCE---PTES----SVKPVVKSRFKKLFEWQFSSVLKTSTT------------T 206
           MKIQPID +   P E+    S KPV+KSR K+LF+ QF  VLK S+T             
Sbjct: 205 MKIQPIDIDSHTPRETIRADSGKPVLKSRLKRLFDRQFHGVLKNSSTEKPESQYSKDGGV 264

Query: 207 DLEPISSVCLANLVQNFIEENNERQQTVK 293
           + EP SSVCLA +VQNFIEE+NE+Q TVK
Sbjct: 265 EFEP-SSVCLAKMVQNFIEESNEKQTTVK 292


>ref|XP_004145374.1| PREDICTED: uncharacterized protein LOC101219977 [Cucumis sativus]
           gi|449471326|ref|XP_004153277.1| PREDICTED:
           uncharacterized protein LOC101207550 [Cucumis sativus]
           gi|449522337|ref|XP_004168183.1| PREDICTED:
           uncharacterized LOC101219977 [Cucumis sativus]
          Length = 368

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 23/89 (25%)
 Frame = +3

Query: 84  MKIQPIDCEPTESS-----VKPVVKSRFKKLFEWQFSSVLKTST---------------- 200
           MKIQPID +  E++     VKPVVKS+ K+LFE QF +VL+ S                 
Sbjct: 5   MKIQPIDFDTIEAAARFELVKPVVKSKLKRLFERQFPNVLRNSAEKANFEELNANKDGSD 64

Query: 201 --TTDLEPISSVCLANLVQNFIEENNERQ 281
             +++LEP SS+CLAN+VQNFIE+NNE+Q
Sbjct: 65  GVSSELEP-SSLCLANMVQNFIEDNNEKQ 92


>gb|AAO29954.1| unknown protein [Arabidopsis thaliana]
          Length = 370

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 46/92 (50%), Positives = 56/92 (60%), Gaps = 26/92 (28%)
 Frame = +3

Query: 84  MKIQPIDCE--PT----ESSVKPVVKSRFKKLFEWQFSSVLKTSTT-------------- 203
           MKIQPID +  PT    ES  KPV+KSR K+LF+  F++VL+ STT              
Sbjct: 5   MKIQPIDIDSSPTVARAESGNKPVLKSRLKRLFDRPFTNVLRNSTTTTTEKPFVVTGGEV 64

Query: 204 ------TDLEPISSVCLANLVQNFIEENNERQ 281
                 T+ EP SSVCLA +VQNFIEENNE+Q
Sbjct: 65  QCGGVVTEFEP-SSVCLAKMVQNFIEENNEKQ 95


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