BLASTX nr result

ID: Coptis24_contig00026916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026916
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...    92   6e-17
ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    88   2e-15
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    84   2e-14
ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    83   5e-14

>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 56/181 (30%), Positives = 100/181 (55%), Gaps = 1/181 (0%)
 Frame = +1

Query: 97  MHRIGLQVNYVPSTFIECSWIKPGEDEVMLNPDGSVTASSCGYGGVLRNREGAVLGAYTG 276
           +++I   +N V  +   C W KP      LN DGS+ +++  +GG+LR+  G  + A+  
Sbjct: 289 LNQIASILNPVSRSIRWCEWTKPEFGWTKLNTDGSIHSNTVSFGGLLRDYRGEPICAFVS 348

Query: 277 SSLNRSVTFQELLAVEKGLECALLMNLKKVRVATDSYRVMQIIQGKETIPWYCLNLHASI 456
            +    V   EL A+ +GL  +L + +K + V +DS  V++ +  K+  P   +     I
Sbjct: 349 KAPQGDVFLAELWAIWRGLVLSLGLGIKAIWVESDSMSVVRTVNRKQLCP-KAVGYLNQI 407

Query: 457 TLLISRLEKFSIQHTYRECNKPADYLSKLCNI-NYVVFMFINHPLDAQLSEMIDDDARGT 633
             L+ + +K+ I H++RE N+ AD+L+K+  + N VV   ++ P    LS +I+DDA+GT
Sbjct: 408 WKLLKKFDKYQISHSWRETNRAADHLAKMDLLANDVVLSPVDFP--PSLSRIIEDDAKGT 465

Query: 634 R 636
           +
Sbjct: 466 K 466


>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 58/165 (35%), Positives = 85/165 (51%), Gaps = 4/165 (2%)
 Frame = +1

Query: 148 CSWIKPGEDEVMLNPDGSVTASSCGYGGVLRNREGAVLGAYTGSSLNRSVTFQELLAVEK 327
           C W KP    + LN DGSV     G+GG+LR+ EG  + A+   +    +   EL A+ +
Sbjct: 272 CIWKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSKAPLDDIFLVELWAIWR 331

Query: 328 GLECALLMNLKKVRVATDSYRVMQII---QGKETIPWYCLNLHASITLLISRLEKFSIQH 498
           GL  AL + +K + V +DS   ++ I   Q        CLN    I  L+ + E++ + H
Sbjct: 332 GLVLALGLGIKVIWVESDSMSAVKTINRVQSHSGKANRCLN---HIWALLKKFEEYKVSH 388

Query: 499 TYRECNKPADYLSKL-CNINYVVFMFINHPLDAQLSEMIDDDARG 630
            +RE NK ADYLSK+    N VV   ++ P    L  +I DDA+G
Sbjct: 389 AWRETNKAADYLSKMVLERNDVVLWPVHFP--TTLQNIIKDDAQG 431


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 56/164 (34%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
 Frame = +1

Query: 151 SWIKPGEDEVMLNPDGSVTASSCGYGGVLRNREGAVLGAYTGSSLNRSVTFQELLAVEKG 330
           SW KP      LN DGS+   + G+GG+ R+  G  + AY   +    +   EL A+ +G
Sbjct: 267 SWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRG 326

Query: 331 LECALLMNLKKVRVATDSYRVMQIIQGKE---TIPWYCLNLHASITLLISRLEKFSIQHT 501
           L  A  + +K + V +DS   ++ I  K+   +    CLN    I +L+ + EK+ + HT
Sbjct: 327 LVLASGLGIKAIWVESDSMSAVKTINRKQPYSSRAGSCLN---HIWVLLEKFEKYLVSHT 383

Query: 502 YRECNKPADYLSKL-CNINYVVFMFINHPLDAQLSEMIDDDARG 630
           +RE NK AD+LSK+  + N VV    + P    L+ +I DDA G
Sbjct: 384 WRETNKAADFLSKMDLSGNDVVLGTADFP--NGLNSIIKDDAEG 425


>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 48/161 (29%), Positives = 82/161 (50%)
 Frame = +1

Query: 148 CSWIKPGEDEVMLNPDGSVTASSCGYGGVLRNREGAVLGAYTGSSLNRSVTFQELLAVEK 327
           C W +P    + LN DGS+ + + G GG+ R+ EG  +  +   +    +   EL A+ +
Sbjct: 165 CQWKRPDFGWIKLNTDGSIDSENAGIGGLFRDYEGNAICGFVSKASGHDIFLVELWAIWR 224

Query: 328 GLECALLMNLKKVRVATDSYRVMQIIQGKETIPWYCLNLHASITLLISRLEKFSIQHTYR 507
           GL  AL ++++ + V +DS  V+  I  ++            I LL+ + +K  + H++R
Sbjct: 225 GLVLALNLHIQVLWVESDSLSVVNTINRQQPYSGKADACLKQIRLLLKKFKKHKVSHSWR 284

Query: 508 ECNKPADYLSKLCNINYVVFMFINHPLDAQLSEMIDDDARG 630
           E N+ ADYL+K+     VV    + P    L+ +I DDA G
Sbjct: 285 ETNRAADYLAKMVVERDVVLWPADFP--TSLNNIIKDDAEG 323


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
 Frame = +1

Query: 151 SWIKPGEDEVMLNPDGSVTASSCGYGGVLRNREGAVLGAYTGSSLNRSVTFQELLAVEKG 330
           SW KP      LN DGS+   + G+GG+ R+  G  + AY   +    +   EL A+ +G
Sbjct: 154 SWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRG 213

Query: 331 LECALLMNLKKVRVATDSYRVMQIIQGKE---TIPWYCLNLHASITLLISRLEKFSIQHT 501
           L  A  + +K + V +DS  V++ I  K+   +    CLN    I +L+ + EK+ + HT
Sbjct: 214 LVLASGLGIKAIWVESDSMSVVKTINRKQPYSSRAGSCLN---HIWVLLGKFEKYRVSHT 270

Query: 502 YRECNKPADYLSKL-CNINYVVFMFINHPLDAQLSEMIDDDARG 630
           +RE NK AD+LS++  + + VV    + P    L+ +I DDA G
Sbjct: 271 WRETNKAADFLSRMDLSGSDVVLGTADFP--NGLNSIIKDDAEG 312


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