BLASTX nr result

ID: Coptis24_contig00026906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026906
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|2...    85   8e-24
ref|XP_004140446.1| PREDICTED: uncharacterized protein LOC101212...    84   2e-23
ref|XP_004170356.1| PREDICTED: uncharacterized protein LOC101229...    84   2e-23
ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265...    90   2e-23
emb|CBI27489.3| unnamed protein product [Vitis vinifera]               90   2e-23

>ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|222851386|gb|EEE88933.1|
           predicted protein [Populus trichocarpa]
          Length = 1950

 Score = 85.1 bits (209), Expect(2) = 8e-24
 Identities = 40/68 (58%), Positives = 52/68 (76%)
 Frame = +2

Query: 95  KVAAIQEKFGKMYQNIEDFDVRVKSVDGFQGGEQDIIIISAVRSNNGGDTAFLSNFQHTN 274
           +V AIQEK GK Y+ I+ F V+V S+DGFQGGE+DI+IIS VRSN GG   F+S+ +  N
Sbjct: 590 QVGAIQEKLGKKYETIDGFSVKVSSIDGFQGGEEDIVIISTVRSNTGGAIGFMSDPRRIN 649

Query: 275 VALIRAKY 298
           VAL RA++
Sbjct: 650 VALTRARH 657



 Score = 50.1 bits (118), Expect(2) = 8e-24
 Identities = 22/30 (73%), Positives = 28/30 (93%)
 Frame = +1

Query: 7   GREEVNDVGHRRKNMVEVAVVLMIVRSLFK 96
           GREE++DVGH RKNMVEVA+VL ++RSL+K
Sbjct: 543 GREELDDVGHSRKNMVEVAIVLKLLRSLYK 572


>ref|XP_004140446.1| PREDICTED: uncharacterized protein LOC101212468 [Cucumis sativus]
          Length = 2710

 Score = 84.0 bits (206), Expect(2) = 2e-23
 Identities = 42/68 (61%), Positives = 50/68 (73%)
 Frame = +2

Query: 95  KVAAIQEKFGKMYQNIEDFDVRVKSVDGFQGGEQDIIIISAVRSNNGGDTAFLSNFQHTN 274
           +VA I++K G  Y  ++ F V+VKSVDGFQGGE+DIIIIS VRSN G    FLS  Q TN
Sbjct: 672 QVATIRDKIGHRYDKLDGFWVKVKSVDGFQGGEEDIIIISTVRSNRGSSVGFLSCDQRTN 731

Query: 275 VALIRAKY 298
           VAL RA+Y
Sbjct: 732 VALTRARY 739



 Score = 50.1 bits (118), Expect(2) = 2e-23
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = +1

Query: 7   GREEVNDVGHRRKNMVEVAVVLMIVRSLFKGCCNSR 114
           G+EE +D+GH RKNM+EVAV L IV+SL+K   NSR
Sbjct: 623 GKEEKDDIGHSRKNMIEVAVALKIVQSLYKAWKNSR 658


>ref|XP_004170356.1| PREDICTED: uncharacterized protein LOC101229717 [Cucumis sativus]
          Length = 2474

 Score = 84.0 bits (206), Expect(2) = 2e-23
 Identities = 42/68 (61%), Positives = 50/68 (73%)
 Frame = +2

Query: 95  KVAAIQEKFGKMYQNIEDFDVRVKSVDGFQGGEQDIIIISAVRSNNGGDTAFLSNFQHTN 274
           +VA I++K G  Y  ++ F V+VKSVDGFQGGE+DIIIIS VRSN G    FLS  Q TN
Sbjct: 672 QVATIRDKIGHRYDKLDGFWVKVKSVDGFQGGEEDIIIISTVRSNRGSSVGFLSCDQRTN 731

Query: 275 VALIRAKY 298
           VAL RA+Y
Sbjct: 732 VALTRARY 739



 Score = 50.1 bits (118), Expect(2) = 2e-23
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = +1

Query: 7   GREEVNDVGHRRKNMVEVAVVLMIVRSLFKGCCNSR 114
           G+EE +D+GH RKNM+EVAV L IV+SL+K   NSR
Sbjct: 623 GKEEKDDIGHSRKNMIEVAVALKIVQSLYKAWKNSR 658


>ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
          Length = 2792

 Score = 89.7 bits (221), Expect(2) = 2e-23
 Identities = 43/68 (63%), Positives = 53/68 (77%)
 Frame = +2

Query: 95  KVAAIQEKFGKMYQNIEDFDVRVKSVDGFQGGEQDIIIISAVRSNNGGDTAFLSNFQHTN 274
           +V AIQ+K G+ Y+ + +F V+VK+VDGFQGGE+DIIII  VRSN GG   FLSN Q TN
Sbjct: 758 QVVAIQDKLGQKYEKLGNFSVKVKTVDGFQGGEEDIIIICTVRSNTGGSIGFLSNPQRTN 817

Query: 275 VALIRAKY 298
           VAL RA+Y
Sbjct: 818 VALTRARY 825



 Score = 43.9 bits (102), Expect(2) = 2e-23
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = +1

Query: 7   GREEVNDVGHRRKNMVEVAVVLMIVRSLFKGCCNSRE 117
           G+EE +DVG  RKNM+EVA+V+ IVR+L+K    S +
Sbjct: 709 GKEEHDDVGKSRKNMIEVAIVIKIVRNLYKEWSGSNQ 745


>emb|CBI27489.3| unnamed protein product [Vitis vinifera]
          Length = 2562

 Score = 89.7 bits (221), Expect(2) = 2e-23
 Identities = 43/68 (63%), Positives = 53/68 (77%)
 Frame = +2

Query: 95  KVAAIQEKFGKMYQNIEDFDVRVKSVDGFQGGEQDIIIISAVRSNNGGDTAFLSNFQHTN 274
           +V AIQ+K G+ Y+ + +F V+VK+VDGFQGGE+DIIII  VRSN GG   FLSN Q TN
Sbjct: 704 QVVAIQDKLGQKYEKLGNFSVKVKTVDGFQGGEEDIIIICTVRSNTGGSIGFLSNPQRTN 763

Query: 275 VALIRAKY 298
           VAL RA+Y
Sbjct: 764 VALTRARY 771



 Score = 43.9 bits (102), Expect(2) = 2e-23
 Identities = 20/37 (54%), Positives = 28/37 (75%)
 Frame = +1

Query: 7   GREEVNDVGHRRKNMVEVAVVLMIVRSLFKGCCNSRE 117
           G+EE +DVG  RKNM+EVA+V+ IVR+L+K    S +
Sbjct: 655 GKEEHDDVGKSRKNMIEVAIVIKIVRNLYKEWSGSNQ 691


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