BLASTX nr result
ID: Coptis24_contig00026892
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00026892
(215 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_001017687.1| liver stage antigen-3, putative [Tetrahymena... 61 1e-07
ref|NP_565513.1| RNA recognition motif-containing protein [Arabi... 60 2e-07
emb|CAA86053.1| protein kinase [Dictyostelium discoideum] 57 2e-06
ref|XP_639097.1| LISK family protein kinase [Dictyostelium disco... 57 2e-06
ref|ZP_08261673.1| hypothetical protein HMPREF0433_01437 [Gemell... 56 3e-06
>ref|XP_001017687.1| liver stage antigen-3, putative [Tetrahymena thermophila]
gi|89299454|gb|EAR97442.1| liver stage antigen-3,
putative [Tetrahymena thermophila SB210]
Length = 334
Score = 60.8 bits (146), Expect = 1e-07
Identities = 32/70 (45%), Positives = 40/70 (57%)
Frame = -2
Query: 214 PVDRQTVVEPVDQLKVAEPIDRQKVVRPVDRQTVVAPIDQLKVAEPIDRQKVVRPVDQPK 35
PV Q V EPV + K+ EP+ QKV V Q + P+ + KV EP+ QKV PV + K
Sbjct: 195 PVVEQKVEEPVAEQKIEEPVAEQKVEEAVAEQKIEEPVTEQKVEEPVTEQKVEEPVAELK 254
Query: 34 VAEPVDRQTV 5
V EPV Q V
Sbjct: 255 VEEPVAEQKV 264
Score = 59.3 bits (142), Expect = 3e-07
Identities = 30/65 (46%), Positives = 38/65 (58%)
Frame = -2
Query: 214 PVDRQTVVEPVDQLKVAEPIDRQKVVRPVDRQTVVAPIDQLKVAEPIDRQKVVRPVDQPK 35
PV Q V EPV + KV EP+ QK+ PV Q V + + K+ EP+ QKV PV + K
Sbjct: 186 PVAEQKVEEPVVEQKVEEPVAEQKIEEPVAEQKVEEAVAEQKIEEPVTEQKVEEPVTEQK 245
Query: 34 VAEPV 20
V EPV
Sbjct: 246 VEEPV 250
Score = 57.8 bits (138), Expect = 9e-07
Identities = 29/66 (43%), Positives = 38/66 (57%)
Frame = -2
Query: 202 QTVVEPVDQLKVAEPIDRQKVVRPVDRQTVVAPIDQLKVAEPIDRQKVVRPVDQPKVAEP 23
Q + EPV + KV EP+ QKV PV Q + P+ + KV E + QK+ PV + KV EP
Sbjct: 181 QKIEEPVAEQKVEEPVVEQKVEEPVAEQKIEEPVAEQKVEEAVAEQKIEEPVTEQKVEEP 240
Query: 22 VDRQTV 5
V Q V
Sbjct: 241 VTEQKV 246
Score = 57.8 bits (138), Expect = 9e-07
Identities = 31/70 (44%), Positives = 39/70 (55%)
Frame = -2
Query: 214 PVDRQTVVEPVDQLKVAEPIDRQKVVRPVDRQTVVAPIDQLKVAEPIDRQKVVRPVDQPK 35
PV Q V E V + K+ EP+ QKV PV Q V P+ +LKV EP+ QKV V + K
Sbjct: 213 PVAEQKVEEAVAEQKIEEPVTEQKVEEPVTEQKVEEPVAELKVEEPVAEQKVEESVAEQK 272
Query: 34 VAEPVDRQTV 5
V E V Q +
Sbjct: 273 VEEVVAEQKI 282
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/70 (42%), Positives = 38/70 (54%)
Frame = -2
Query: 214 PVDRQTVVEPVDQLKVAEPIDRQKVVRPVDRQTVVAPIDQLKVAEPIDRQKVVRPVDQPK 35
PV Q + EPV + KV E + QK+ PV Q V P+ + KV EP+ KV PV + K
Sbjct: 204 PVAEQKIEEPVAEQKVEEAVAEQKIEEPVTEQKVEEPVTEQKVEEPVAELKVEEPVAEQK 263
Query: 34 VAEPVDRQTV 5
V E V Q V
Sbjct: 264 VEESVAEQKV 273
>ref|NP_565513.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|4567275|gb|AAD23688.1| expressed protein [Arabidopsis
thaliana] gi|16604631|gb|AAL24108.1| unknown protein
[Arabidopsis thaliana] gi|27754736|gb|AAO22811.1|
unknown protein [Arabidopsis thaliana]
gi|330252084|gb|AEC07178.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 1003
Score = 59.7 bits (143), Expect = 2e-07
Identities = 21/68 (30%), Positives = 52/68 (76%)
Frame = -2
Query: 214 PVDRQTVVEPVDQLKVAEPIDRQKVVRPVDRQTVVAPIDQLKVAEPIDRQKVVRPVDQPK 35
PV+R+ V +P+++ +V +P++R+K +P++ + V P ++ +V +P++R++V +PV++ +
Sbjct: 146 PVERKKVEKPIERKQVEKPVERKKAEKPIELKQVEKPFERKQVEKPVERKQVEKPVERKQ 205
Query: 34 VAEPVDRQ 11
V +P++R+
Sbjct: 206 VEKPIERK 213
Score = 56.6 bits (135), Expect = 2e-06
Identities = 24/62 (38%), Positives = 47/62 (75%)
Frame = -2
Query: 190 EPVDQLKVAEPIDRQKVVRPVDRQTVVAPIDQLKVAEPIDRQKVVRPVDQPKVAEPVDRQ 11
+PV++ KV +PI+R++V +PV+R+ PI+ +V +P +R++V +PV++ +V +PV+R+
Sbjct: 145 KPVERKKVEKPIERKQVEKPVERKKAEKPIELKQVEKPFERKQVEKPVERKQVEKPVERK 204
Query: 10 TV 5
V
Sbjct: 205 QV 206
>emb|CAA86053.1| protein kinase [Dictyostelium discoideum]
Length = 1094
Score = 56.6 bits (135), Expect = 2e-06
Identities = 24/65 (36%), Positives = 40/65 (61%)
Frame = -2
Query: 211 VDRQTVVEPVDQLKVAEPIDRQKVVRPVDRQTVVAPIDQLKVAEPIDRQKVVRPVDQPKV 32
V+ EPV+++KV EP++ K PV+ P++++K EP++ KV PV++ KV
Sbjct: 740 VEEVKAEEPVEEVKVEEPVEEVKAEEPVEEVKAEEPVEEVKTEEPVEEVKVEEPVEEVKV 799
Query: 31 AEPVD 17
EPV+
Sbjct: 800 EEPVE 804
>ref|XP_639097.1| LISK family protein kinase [Dictyostelium discoideum AX4]
gi|182662414|sp|Q23915.2|KINX_DICDI RecName:
Full=Probable serine/threonine-protein kinase kinX
gi|60467661|gb|EAL65680.1| LISK family protein kinase
[Dictyostelium discoideum AX4]
Length = 1094
Score = 56.6 bits (135), Expect = 2e-06
Identities = 24/65 (36%), Positives = 40/65 (61%)
Frame = -2
Query: 211 VDRQTVVEPVDQLKVAEPIDRQKVVRPVDRQTVVAPIDQLKVAEPIDRQKVVRPVDQPKV 32
V+ EPV+++KV EP++ K PV+ P++++K EP++ KV PV++ KV
Sbjct: 740 VEEVKAEEPVEEVKVEEPVEEVKAEEPVEEVKAEEPVEEVKTEEPVEEVKVEEPVEEVKV 799
Query: 31 AEPVD 17
EPV+
Sbjct: 800 EEPVE 804
>ref|ZP_08261673.1| hypothetical protein HMPREF0433_01437 [Gemella sanguinis M325]
gi|328836808|gb|EGF86457.1| hypothetical protein
HMPREF0433_01437 [Gemella sanguinis M325]
Length = 255
Score = 55.8 bits (133), Expect = 3e-06
Identities = 28/70 (40%), Positives = 42/70 (60%)
Frame = -2
Query: 214 PVDRQTVVEPVDQLKVAEPIDRQKVVRPVDRQTVVAPIDQLKVAEPIDRQKVVRPVDQPK 35
PV R+ V PV + VA+P+ R+ V RPV R+ V P+ + VA P+ R+ V +PV +
Sbjct: 45 PVARRAVARPVARRVVAKPVARRAVARPVARRVVAKPVARRAVARPVVRRVVAKPVARKI 104
Query: 34 VAEPVDRQTV 5
PV R+T+
Sbjct: 105 TTRPVVRKTI 114