BLASTX nr result

ID: Coptis24_contig00026880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026880
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529072.1| serine/threonine protein kinase, putative [R...   135   4e-30
ref|XP_002328168.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
ref|XP_002266280.2| PREDICTED: serine/threonine-protein kinase K...   132   3e-29
emb|CBI17059.3| unnamed protein product [Vitis vinifera]              132   3e-29
emb|CAN83229.1| hypothetical protein VITISV_002764 [Vitis vinifera]   132   3e-29

>ref|XP_002529072.1| serine/threonine protein kinase, putative [Ricinus communis]
           gi|223531484|gb|EEF33316.1| serine/threonine protein
           kinase, putative [Ricinus communis]
          Length = 441

 Score =  135 bits (339), Expect = 4e-30
 Identities = 59/78 (75%), Positives = 70/78 (89%)
 Frame = +3

Query: 3   KEPSVGSSIKDLITQLLIKDPARRMGSTMGATAIKHHSFFQGVNWALLRCTTPPYVPPPF 182
           KEP++ S+ KDLI+QLL+KDPARR+GSTMGA+AIKHH FFQGVNWALLRCT PPYVPPP+
Sbjct: 364 KEPAIPSTAKDLISQLLVKDPARRLGSTMGASAIKHHPFFQGVNWALLRCTRPPYVPPPY 423

Query: 183 IYRDVSDDSCPDTPVDYY 236
               VSD+SCP+TPV+YY
Sbjct: 424 TKEIVSDESCPETPVEYY 441


>ref|XP_002328168.1| predicted protein [Populus trichocarpa] gi|222837683|gb|EEE76048.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/78 (76%), Positives = 69/78 (88%)
 Frame = +3

Query: 3   KEPSVGSSIKDLITQLLIKDPARRMGSTMGATAIKHHSFFQGVNWALLRCTTPPYVPPPF 182
           KEP V ++ KDLI+QLL+KDPARRMGSTMGA+A+KHH FFQGVNWALLRCT PPYVPPPF
Sbjct: 362 KEPVVPATAKDLISQLLVKDPARRMGSTMGASAVKHHPFFQGVNWALLRCTPPPYVPPPF 421

Query: 183 IYRDVSDDSCPDTPVDYY 236
               VSD+SCP+TPV+YY
Sbjct: 422 NTEVVSDESCPETPVEYY 439


>ref|XP_002266280.2| PREDICTED: serine/threonine-protein kinase KIPK-like [Vitis
           vinifera]
          Length = 436

 Score =  132 bits (332), Expect = 3e-29
 Identities = 59/78 (75%), Positives = 69/78 (88%)
 Frame = +3

Query: 3   KEPSVGSSIKDLITQLLIKDPARRMGSTMGATAIKHHSFFQGVNWALLRCTTPPYVPPPF 182
           KEP V ++ KDLI+QLL+KDPARRMGSTMGA+AIKHH FFQGVNWALLRCT PP++PPPF
Sbjct: 359 KEPLVPATTKDLISQLLVKDPARRMGSTMGASAIKHHPFFQGVNWALLRCTPPPFIPPPF 418

Query: 183 IYRDVSDDSCPDTPVDYY 236
               VSD+SCP+TP+DYY
Sbjct: 419 NRDVVSDESCPETPMDYY 436


>emb|CBI17059.3| unnamed protein product [Vitis vinifera]
          Length = 276

 Score =  132 bits (332), Expect = 3e-29
 Identities = 59/78 (75%), Positives = 69/78 (88%)
 Frame = +3

Query: 3   KEPSVGSSIKDLITQLLIKDPARRMGSTMGATAIKHHSFFQGVNWALLRCTTPPYVPPPF 182
           KEP V ++ KDLI+QLL+KDPARRMGSTMGA+AIKHH FFQGVNWALLRCT PP++PPPF
Sbjct: 199 KEPLVPATTKDLISQLLVKDPARRMGSTMGASAIKHHPFFQGVNWALLRCTPPPFIPPPF 258

Query: 183 IYRDVSDDSCPDTPVDYY 236
               VSD+SCP+TP+DYY
Sbjct: 259 NRDVVSDESCPETPMDYY 276


>emb|CAN83229.1| hypothetical protein VITISV_002764 [Vitis vinifera]
          Length = 450

 Score =  132 bits (332), Expect = 3e-29
 Identities = 59/78 (75%), Positives = 69/78 (88%)
 Frame = +3

Query: 3   KEPSVGSSIKDLITQLLIKDPARRMGSTMGATAIKHHSFFQGVNWALLRCTTPPYVPPPF 182
           KEP V ++ KDLI+QLL+KDPARRMGSTMGA+AIKHH FFQGVNWALLRCT PP++PPPF
Sbjct: 373 KEPLVPATTKDLISQLLVKDPARRMGSTMGASAIKHHPFFQGVNWALLRCTPPPFIPPPF 432

Query: 183 IYRDVSDDSCPDTPVDYY 236
               VSD+SCP+TP+DYY
Sbjct: 433 NRDVVSDESCPETPMDYY 450


Top