BLASTX nr result

ID: Coptis24_contig00026873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026873
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268309.1| PREDICTED: uncharacterized protein LOC100244...   116   2e-24
emb|CAN77779.1| hypothetical protein VITISV_004172 [Vitis vinifera]   116   2e-24
ref|XP_002531453.1| zinc ion binding protein, putative [Ricinus ...   114   1e-23
ref|XP_002324580.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002331005.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19

>ref|XP_002268309.1| PREDICTED: uncharacterized protein LOC100244833 [Vitis vinifera]
           gi|296084556|emb|CBI25577.3| unnamed protein product
           [Vitis vinifera]
          Length = 245

 Score =  116 bits (290), Expect = 2e-24
 Identities = 62/116 (53%), Positives = 76/116 (65%)
 Frame = -1

Query: 375 VEFVLEHHGDLSLYLRTCKSLQLSPDFLLPHDIGYDEITNEAPXXXXXXXXXXXXXXXXX 196
           V+F+L+H+ DLS YLRTC SLQLSPDFL+P D+G DE+TNE P                 
Sbjct: 133 VDFLLKHNKDLSPYLRTCHSLQLSPDFLVPPDMGEDEMTNETPHSTIVDCDEPMSSSSGS 192

Query: 195 XXSKNVSIPCTNFVKKKRSGLFVCXXXXXXXXXXSEEDMVTSMNRRKRIPHRSPLC 28
             S+N+S+ CT  V+KKRSGL+VC          SEEDM TSM+RRK IPHRSP+C
Sbjct: 193 SGSENMSMMCTEIVRKKRSGLYVC---GRSASKVSEEDMATSMSRRKGIPHRSPMC 245


>emb|CAN77779.1| hypothetical protein VITISV_004172 [Vitis vinifera]
          Length = 714

 Score =  116 bits (290), Expect = 2e-24
 Identities = 62/116 (53%), Positives = 76/116 (65%)
 Frame = -1

Query: 375 VEFVLEHHGDLSLYLRTCKSLQLSPDFLLPHDIGYDEITNEAPXXXXXXXXXXXXXXXXX 196
           V+F+L+H+ DLS YLRTC SLQLSPDFL+P D+G DE+TNE P                 
Sbjct: 602 VDFLLKHNKDLSPYLRTCHSLQLSPDFLVPPDMGEDEMTNETPHSTIVDCDEPMSSSSGS 661

Query: 195 XXSKNVSIPCTNFVKKKRSGLFVCXXXXXXXXXXSEEDMVTSMNRRKRIPHRSPLC 28
             S+N+S+ CT  V+KKRSGL+VC          SEEDM TSM+RRK IPHRSP+C
Sbjct: 662 SGSENMSMMCTEIVRKKRSGLYVC---GRSASKVSEEDMATSMSRRKGIPHRSPMC 714


>ref|XP_002531453.1| zinc ion binding protein, putative [Ricinus communis]
           gi|223528946|gb|EEF30940.1| zinc ion binding protein,
           putative [Ricinus communis]
          Length = 269

 Score =  114 bits (284), Expect = 1e-23
 Identities = 61/116 (52%), Positives = 74/116 (63%)
 Frame = -1

Query: 375 VEFVLEHHGDLSLYLRTCKSLQLSPDFLLPHDIGYDEITNEAPXXXXXXXXXXXXXXXXX 196
           V+FVL+H+ DLS YLR C SL LSPDFL+P D+G DE+TNE P                 
Sbjct: 157 VDFVLKHYKDLSPYLRRCNSLTLSPDFLIPQDMGDDEMTNETPHSTIVDSEDPMSWSSGS 216

Query: 195 XXSKNVSIPCTNFVKKKRSGLFVCXXXXXXXXXXSEEDMVTSMNRRKRIPHRSPLC 28
             S+N+S+ CT  V+KKRSGL+VC          S+EDM TSM+RRK IPHRSPLC
Sbjct: 217 SGSENMSMVCTEIVRKKRSGLYVC---GRSVSKVSDEDMATSMSRRKGIPHRSPLC 269


>ref|XP_002324580.1| predicted protein [Populus trichocarpa] gi|222866014|gb|EEF03145.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/116 (48%), Positives = 70/116 (60%)
 Frame = -1

Query: 375 VEFVLEHHGDLSLYLRTCKSLQLSPDFLLPHDIGYDEITNEAPXXXXXXXXXXXXXXXXX 196
           V+FVL+H+ DLS YLR C +L L PDF +P D+  DE+TNE P                 
Sbjct: 131 VDFVLKHYKDLSPYLRRCNALTLGPDFFIPQDMADDEMTNETPHSTIVDSDEPMSWSSSS 190

Query: 195 XXSKNVSIPCTNFVKKKRSGLFVCXXXXXXXXXXSEEDMVTSMNRRKRIPHRSPLC 28
             S+N+SI  T  V+KKRSGL+VC          S+EDM +SM+RRK IPHRSPLC
Sbjct: 191 SGSENMSIASTGIVRKKRSGLYVC---ARSLSKVSDEDMASSMSRRKGIPHRSPLC 243


>ref|XP_002331005.1| predicted protein [Populus trichocarpa] gi|222872935|gb|EEF10066.1|
           predicted protein [Populus trichocarpa]
          Length = 243

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 53/116 (45%), Positives = 70/116 (60%)
 Frame = -1

Query: 375 VEFVLEHHGDLSLYLRTCKSLQLSPDFLLPHDIGYDEITNEAPXXXXXXXXXXXXXXXXX 196
           V+FVL+H+ DLS YLR C +L L PDF +P D+  DE+TNE P                 
Sbjct: 131 VDFVLKHYKDLSPYLRRCNTLTLGPDFFIPQDLADDEMTNETPHSTIVDSDEPMSWSSSS 190

Query: 195 XXSKNVSIPCTNFVKKKRSGLFVCXXXXXXXXXXSEEDMVTSMNRRKRIPHRSPLC 28
             S+N+S+  +  V+KKRSGL+VC          S+ED+ +SM+RRK IPHRSPLC
Sbjct: 191 SGSENMSMASSEIVRKKRSGLYVC---ARSMNKVSDEDIASSMSRRKGIPHRSPLC 243


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