BLASTX nr result

ID: Coptis24_contig00026848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026848
         (1324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...   347   5e-93
ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...   305   2e-80
ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787...   253   1e-64
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]   247   4e-63
ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...   246   7e-63

>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score =  347 bits (889), Expect = 5e-93
 Identities = 188/423 (44%), Positives = 256/423 (60%), Gaps = 3/423 (0%)
 Frame = -2

Query: 1263 SVAMVIESTAIHLLLGPIITLVYPLYASVRAIESSSNADIQQWLTYWVMFTLISVXXXXX 1084
            ++   + +   ++   P   L+YPLYAS++AIES S    +Q LTYW++F+L ++     
Sbjct: 4    AIFFTVLAKVFNVFAWPSFALIYPLYASIQAIESDSYFKNEQCLTYWILFSLATMLELVF 63

Query: 1083 XXXXXXXXXXPYAKVTITFWLLSPYFAGAAYVYDHLVKPCFSLDQNKFIVWFISWNKDFI 904
                      P+AK   TF L+  YF GA+YVY H V P  S +     ++ I   KD I
Sbjct: 64   AKLLQCIPFWPHAKGVATFLLVIHYFQGASYVYQHFVSPSISGNLQICCIFSILRKKDDI 123

Query: 903  PSRSDDFLAEAERYIQENGAEALLEVISKDEAKKPFLSRKDMVCAWPHSQNDIQREWTCV 724
             S  D+FL  AERYI+ENG E L +++   E  +P+    +       S    QREW+C 
Sbjct: 124  WSEPDNFLDAAERYIEENGPEELEKLLICQENHEPYYHTTERNLTLSTSPMKAQREWSCA 183

Query: 723  LCTVTTTSENNLRSHLQGKKHKANEELI--ADRTLSMLKGGSNLMMQRTYMVDLVQDFK- 553
            LC +TT+SE +L++HLQGK+HKA EE    A+  +   K  S+L +     + L+ +F  
Sbjct: 184  LCLITTSSEKHLKNHLQGKEHKAKEEEEERANELVRKTKVKSSLTLDSNDPMVLLGNFNG 243

Query: 552  IKEFFLGSLKHHINPFARPLRWCTWEKPKVGWTKLNTDGSIDLKNARLGGLLRDHLGCPT 373
            I    L  L + + P AR +RW +WEKP+ GWTKLNTDGSID  NA  GGL RDH G P 
Sbjct: 244  IALLNLERLHNFLTPVARSIRWYSWEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPI 303

Query: 372  RAFVSKVPRDGIFSLELWAVWRGLKLALGQGVKTIWVESDSKSVVQVINKNGSYPQKNER 193
             A+ SK  ++ IF +ELWA+WRGL LA G G+K IWVESDS S V+ IN+   Y  +   
Sbjct: 304  CAYASKAHQNDIFLVELWAIWRGLVLASGLGIKAIWVESDSMSAVKTINRKQPYSSRAGS 363

Query: 192  CLKQIWKLLKRFEKFRVTHSWREANRAADHLAKMNLYGRDVELWPADFPEPLCNIIKEDA 13
            CL  IW LL++FEK+ V+H+WRE N+AAD L+KM+L G DV L  ADFP  L +IIK+DA
Sbjct: 364  CLNHIWVLLEKFEKYLVSHTWRETNKAADFLSKMDLSGNDVVLGTADFPNGLNSIIKDDA 423

Query: 12   EGK 4
            EG+
Sbjct: 424  EGR 426


>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
            gi|223533283|gb|EEF35036.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 437

 Score =  305 bits (780), Expect = 2e-80
 Identities = 174/425 (40%), Positives = 247/425 (58%), Gaps = 15/425 (3%)
 Frame = -2

Query: 1233 IHLLLGPIITLVYPLYASVRAIESSSNADIQQWLTYWVMFTLISVXXXXXXXXXXXXXXX 1054
            + +L  P   L  PLYAS RA+E+ S++  QQ LT+WV+F L++                
Sbjct: 15   LDILSWPSFALFCPLYASFRAMETESHSRNQQCLTFWVLFALLAFFEAALSKLLLGLPFW 74

Query: 1053 PYAKVTITFWLLSPYFAGAAYVYDHLVKPCFSLDQNKFIVWFISWNKDFI-PSRSDDFLA 877
            PY K  +T  L+   F GA+Y+Y   ++  +  D ++ +   + WN  FI  SR   F+ 
Sbjct: 75   PYVKGVVTVLLVMTDFGGASYIYKSFIRT-YPFDSSRILC--LIWNLLFILTSRCFSFIC 131

Query: 876  EA---ERYIQENGAEALLEVISKDEAKKP------FLSRKDMV----CAWPHSQNDIQRE 736
            E    E+     G +  + V  +++ +KP      F    D +     + P    ++Q+E
Sbjct: 132  ELFQREKCFSFYGTDGNIVVDGEEKVEKPIIFQGTFRPNNDNIERDHTSTPLVSKNVQKE 191

Query: 735  WTCVLCTVTTTSENNLRSHLQGKKHKAN-EELIADRTLSMLKGGSNLMMQRTYMVDLVQD 559
            W+C LC ++TTSE  L+ HL+GKKHK   +E+ A+  +      S  M+ R   + L+ +
Sbjct: 192  WSCALCLISTTSEKCLKKHLRGKKHKGKKDEVRAEELILKSTYNSCHMVNRNNGMVLLGN 251

Query: 558  FKIKEFFLGSLKHHINPFARPLRWCTWEKPKVGWTKLNTDGSIDLKNARLGGLLRDHLGC 379
                E + G     I+P    +RWC W+KP VGW KLNTDGS+D ++A  GGLLRD+ G 
Sbjct: 252  LVNLEKWSGL----ISPVTGSIRWCIWKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGN 307

Query: 378  PTRAFVSKVPRDGIFSLELWAVWRGLKLALGQGVKTIWVESDSKSVVQVINKNGSYPQKN 199
               AFVSK P D IF +ELWA+WRGL LALG G+K IWVESDS S V+ IN+  S+  K 
Sbjct: 308  AICAFVSKAPLDDIFLVELWAIWRGLVLALGLGIKVIWVESDSMSAVKTINRVQSHSGKA 367

Query: 198  ERCLKQIWKLLKRFEKFRVTHSWREANRAADHLAKMNLYGRDVELWPADFPEPLCNIIKE 19
             RCL  IW LLK+FE+++V+H+WRE N+AAD+L+KM L   DV LWP  FP  L NIIK+
Sbjct: 368  NRCLNHIWALLKKFEEYKVSHAWRETNKAADYLSKMVLERNDVVLWPVHFPTTLQNIIKD 427

Query: 18   DAEGK 4
            DA+G+
Sbjct: 428  DAQGR 432


>ref|XP_003544251.1| PREDICTED: uncharacterized protein LOC100787629 [Glycine max]
          Length = 470

 Score =  253 bits (645), Expect = 1e-64
 Identities = 126/252 (50%), Positives = 163/252 (64%)
 Frame = -2

Query: 756 QNDIQREWTCVLCTVTTTSENNLRSHLQGKKHKANEELIADRTLSMLKGGSNLMMQRTYM 577
           +N +Q+EW+C LC ++TTSEN LR+HL+G+KHK  E  +     S  K    +++ R   
Sbjct: 231 KNLVQKEWSCALCQISTTSENCLRAHLKGRKHKDKENELRVEFSSTQKRIKGMVLLRN-- 288

Query: 576 VDLVQDFKIKEFFLGSLKHHINPFARPLRWCTWEKPKVGWTKLNTDGSIDLKNARLGGLL 397
                        L  +   +NP +R +RWC W KP+ GWTKLNTDGSI       GGLL
Sbjct: 289 -------------LNQIASILNPVSRSIRWCEWTKPEFGWTKLNTDGSIHSNTVSFGGLL 335

Query: 396 RDHLGCPTRAFVSKVPRDGIFSLELWAVWRGLKLALGQGVKTIWVESDSKSVVQVINKNG 217
           RD+ G P  AFVSK P+  +F  ELWA+WRGL L+LG G+K IWVESDS SVV+ +N+  
Sbjct: 336 RDYRGEPICAFVSKAPQGDVFLAELWAIWRGLVLSLGLGIKAIWVESDSMSVVRTVNRKQ 395

Query: 216 SYPQKNERCLKQIWKLLKRFEKFRVTHSWREANRAADHLAKMNLYGRDVELWPADFPEPL 37
             P K    L QIWKLLK+F+K++++HSWRE NRAADHLAKM+L   DV L P DFP  L
Sbjct: 396 LCP-KAVGYLNQIWKLLKKFDKYQISHSWRETNRAADHLAKMDLLANDVVLSPVDFPPSL 454

Query: 36  CNIIKEDAEGKK 1
             II++DA+G K
Sbjct: 455 SRIIEDDAKGTK 466


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score =  247 bits (631), Expect = 4e-63
 Identities = 146/336 (43%), Positives = 187/336 (55%), Gaps = 3/336 (0%)
 Frame = -2

Query: 1002 GAAYVYDHLVKPCFSLDQNKFIVWFISWNKDFIPSRSDDFLAEAERYIQENGAEALLEVI 823
            GA+YVY H V P  S +     ++ I   KD I S  D+FL  AERYI+ENG E L    
Sbjct: 25   GASYVYQHFVSPSISGNLQICCIFSILRKKDDIXSEPDNFLDAAERYIEENGPEEL---- 80

Query: 822  SKDEAKKPFLSRKDMVCAWPHSQNDIQREWTCVLCTVTTTSENNLRSHLQGKKHKANEEL 643
                        K ++C                                QGK+HKA EE 
Sbjct: 81   -----------EKLLIC--------------------------------QGKEHKAKEEE 97

Query: 642  I--ADRTLSMLKGGSNLMMQRTYMVDLVQDFK-IKEFFLGSLKHHINPFARPLRWCTWEK 472
               A+  +   K  S+L +     + L+ +F  I    L  L + + P AR +RW +WEK
Sbjct: 98   EERANELVRKTKVKSSLTLDSNDPMVLLXNFNGIALLNLERLHNFLTPVARSIRWYSWEK 157

Query: 471  PKVGWTKLNTDGSIDLKNARLGGLLRDHLGCPTRAFVSKVPRDGIFSLELWAVWRGLKLA 292
            P+ GWTKLNTDGSID  NA  GGL RDH G P  A+ SK  ++ IF +ELWA+WRGL LA
Sbjct: 158  PEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGLVLA 217

Query: 291  LGQGVKTIWVESDSKSVVQVINKNGSYPQKNERCLKQIWKLLKRFEKFRVTHSWREANRA 112
             G G+K IWVESDS SVV+ IN+   Y  +   CL  IW LL +FEK+RV+H+WRE N+A
Sbjct: 218  SGLGIKAIWVESDSMSVVKTINRKQPYSSRAGSCLNHIWVLLGKFEKYRVSHTWRETNKA 277

Query: 111  ADHLAKMNLYGRDVELWPADFPEPLCNIIKEDAEGK 4
            AD L++M+L G DV L  ADFP  L +IIK+DAEG+
Sbjct: 278  ADFLSRMDLSGSDVVLGTADFPNGLNSIIKDDAEGR 313


>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  246 bits (629), Expect = 7e-63
 Identities = 140/306 (45%), Positives = 185/306 (60%), Gaps = 9/306 (2%)
 Frame = -2

Query: 897 RSDDFLAEAERYIQENGAEALLEVISKDEAKKPFLSRKDMV---CAWPHSQNDIQREWTC 727
           R +DF+  A+  +  +G E L     K   ++ F    D+V    A P S   +Q+EW+C
Sbjct: 33  RHNDFVDVADTNMIGDGHEEL----EKSVFQQIFEPNHDLVEEEIAGPTSPKKVQKEWSC 88

Query: 726 VLCTVTTTSENNLRSHLQGKKHKANEELIADRTLSMLKGGSNLMMQRTYMVDLVQDFKIK 547
            +C  +T+SE  L+ H QGK+H+ NEE +    L+     S L  +R          + +
Sbjct: 89  AVCLFSTSSEIFLKKHFQGKEHETNEENLRAEELARDTSKSLLTAKR----------EPR 138

Query: 546 EFFLGSLKHH------INPFARPLRWCTWEKPKVGWTKLNTDGSIDLKNARLGGLLRDHL 385
             FLG+L +       + P AR +RWC W++P  GW KLNTDGSID +NA +GGL RD+ 
Sbjct: 139 MVFLGNLANLETWSDLLGPVARSIRWCQWKRPDFGWIKLNTDGSIDSENAGIGGLFRDYE 198

Query: 384 GCPTRAFVSKVPRDGIFSLELWAVWRGLKLALGQGVKTIWVESDSKSVVQVINKNGSYPQ 205
           G     FVSK     IF +ELWA+WRGL LAL   ++ +WVESDS SVV  IN+   Y  
Sbjct: 199 GNAICGFVSKASGHDIFLVELWAIWRGLVLALNLHIQVLWVESDSLSVVNTINRQQPYSG 258

Query: 204 KNERCLKQIWKLLKRFEKFRVTHSWREANRAADHLAKMNLYGRDVELWPADFPEPLCNII 25
           K + CLKQI  LLK+F+K +V+HSWRE NRAAD+LAKM +  RDV LWPADFP  L NII
Sbjct: 259 KADACLKQIRLLLKKFKKHKVSHSWRETNRAADYLAKM-VVERDVVLWPADFPTSLNNII 317

Query: 24  KEDAEG 7
           K+DAEG
Sbjct: 318 KDDAEG 323


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