BLASTX nr result
ID: Coptis24_contig00026821
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026821 (332 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containi... 142 2e-32 emb|CBI15606.3| unnamed protein product [Vitis vinifera] 142 2e-32 ref|XP_002520332.1| pentatricopeptide repeat-containing protein,... 134 6e-30 ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containi... 130 8e-29 ref|XP_003553291.1| PREDICTED: pentatricopeptide repeat-containi... 122 4e-26 >ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77405-like [Vitis vinifera] Length = 432 Score = 142 bits (359), Expect = 2e-32 Identities = 70/100 (70%), Positives = 86/100 (86%), Gaps = 1/100 (1%) Frame = -1 Query: 332 VEMMRRMKSMNHGIPTTSSYTPVIHALCEAGRVLEARDFLAELVNEGSVPREYTYKLVCN 153 V+M+ +MK MNHGIPTTSSYTP+IHALCE GR+LEARDFL ELV+ GSVPREYTYK+VC+ Sbjct: 330 VDMLCKMKEMNHGIPTTSSYTPIIHALCETGRILEARDFLIELVDGGSVPREYTYKVVCD 389 Query: 152 ALSAADEAS-LPDELRRRIEDGMEKRYRQVMHVKPMMSER 36 +L +A EA+ L DELR RIE+G+E RY+QVM VK +M+ R Sbjct: 390 SLRSAGEANMLGDELRGRIENGIENRYKQVMKVKLIMTHR 429 >emb|CBI15606.3| unnamed protein product [Vitis vinifera] Length = 381 Score = 142 bits (359), Expect = 2e-32 Identities = 70/100 (70%), Positives = 86/100 (86%), Gaps = 1/100 (1%) Frame = -1 Query: 332 VEMMRRMKSMNHGIPTTSSYTPVIHALCEAGRVLEARDFLAELVNEGSVPREYTYKLVCN 153 V+M+ +MK MNHGIPTTSSYTP+IHALCE GR+LEARDFL ELV+ GSVPREYTYK+VC+ Sbjct: 279 VDMLCKMKEMNHGIPTTSSYTPIIHALCETGRILEARDFLIELVDGGSVPREYTYKVVCD 338 Query: 152 ALSAADEAS-LPDELRRRIEDGMEKRYRQVMHVKPMMSER 36 +L +A EA+ L DELR RIE+G+E RY+QVM VK +M+ R Sbjct: 339 SLRSAGEANMLGDELRGRIENGIENRYKQVMKVKLIMTHR 378 >ref|XP_002520332.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223540551|gb|EEF42118.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 441 Score = 134 bits (338), Expect = 6e-30 Identities = 64/97 (65%), Positives = 81/97 (83%), Gaps = 1/97 (1%) Frame = -1 Query: 332 VEMMRRMKSMNHGIPTTSSYTPVIHALCEAGRVLEARDFLAELVNEGSVPREYTYKLVCN 153 VEM+RRM++MNHG+ T+SSYTP+IHALCEA RVLEARDFL ELV+ GS+PREYTYKLVC Sbjct: 339 VEMLRRMQNMNHGLATSSSYTPIIHALCEADRVLEARDFLLELVDGGSIPREYTYKLVCE 398 Query: 152 ALSAADEASL-PDELRRRIEDGMEKRYRQVMHVKPMM 45 + +A E +L DE RI+DG+++R+RQV VKP+M Sbjct: 399 TMKSAREVNLIDDEFHNRIKDGIDERFRQVKKVKPIM 435 >ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77405-like [Cucumis sativus] gi|449518241|ref|XP_004166151.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77405-like [Cucumis sativus] Length = 445 Score = 130 bits (328), Expect = 8e-29 Identities = 63/100 (63%), Positives = 81/100 (81%), Gaps = 1/100 (1%) Frame = -1 Query: 332 VEMMRRMKSMNHGIPTTSSYTPVIHALCEAGRVLEARDFLAELVNEGSVPREYTYKLVCN 153 ++M+R M+ MNHGI T+SSYTP+IHALCE G+V+EARDFL EL+ EGSVPREYTY+LVCN Sbjct: 344 IKMLRMMQKMNHGIATSSSYTPIIHALCEGGKVIEARDFLLELLEEGSVPREYTYQLVCN 403 Query: 152 ALSAADEASLPDE-LRRRIEDGMEKRYRQVMHVKPMMSER 36 L++A +ASL DE + RI G+E RYR+V VK +MS + Sbjct: 404 LLNSAGKASLLDENVHERIRHGIENRYREVKKVKLIMSRK 443 >ref|XP_003553291.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77405-like [Glycine max] Length = 732 Score = 122 bits (305), Expect = 4e-26 Identities = 61/102 (59%), Positives = 77/102 (75%), Gaps = 3/102 (2%) Frame = -1 Query: 332 VEMMRRMKSMNHGIPTTSSYTPVIHALCEAGRVLEARDFLAELVNEGSVPREYTYKLVCN 153 VEM+R M+ + HG+P +SSYTP+IHALCEAGRV+EA FL ELV GSVPREYTY LVC+ Sbjct: 622 VEMLREMQRLGHGVPGSSSYTPIIHALCEAGRVVEAWWFLVELVEGGSVPREYTYGLVCD 681 Query: 152 ALSAADEASL---PDELRRRIEDGMEKRYRQVMHVKPMMSER 36 L AA E L D + +RI+DG+ RYRQ+M VKP+M+ + Sbjct: 682 RLRAAGEGGLLEDHDGVHKRIKDGIWNRYRQMMKVKPVMARK 723