BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026821
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containi...   142   2e-32
emb|CBI15606.3| unnamed protein product [Vitis vinifera]              142   2e-32
ref|XP_002520332.1| pentatricopeptide repeat-containing protein,...   134   6e-30
ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containi...   130   8e-29
ref|XP_003553291.1| PREDICTED: pentatricopeptide repeat-containi...   122   4e-26

>ref|XP_002279168.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Vitis vinifera]
          Length = 432

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/100 (70%), Positives = 86/100 (86%), Gaps = 1/100 (1%)
 Frame = -1

Query: 332 VEMMRRMKSMNHGIPTTSSYTPVIHALCEAGRVLEARDFLAELVNEGSVPREYTYKLVCN 153
           V+M+ +MK MNHGIPTTSSYTP+IHALCE GR+LEARDFL ELV+ GSVPREYTYK+VC+
Sbjct: 330 VDMLCKMKEMNHGIPTTSSYTPIIHALCETGRILEARDFLIELVDGGSVPREYTYKVVCD 389

Query: 152 ALSAADEAS-LPDELRRRIEDGMEKRYRQVMHVKPMMSER 36
           +L +A EA+ L DELR RIE+G+E RY+QVM VK +M+ R
Sbjct: 390 SLRSAGEANMLGDELRGRIENGIENRYKQVMKVKLIMTHR 429


>emb|CBI15606.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/100 (70%), Positives = 86/100 (86%), Gaps = 1/100 (1%)
 Frame = -1

Query: 332 VEMMRRMKSMNHGIPTTSSYTPVIHALCEAGRVLEARDFLAELVNEGSVPREYTYKLVCN 153
           V+M+ +MK MNHGIPTTSSYTP+IHALCE GR+LEARDFL ELV+ GSVPREYTYK+VC+
Sbjct: 279 VDMLCKMKEMNHGIPTTSSYTPIIHALCETGRILEARDFLIELVDGGSVPREYTYKVVCD 338

Query: 152 ALSAADEAS-LPDELRRRIEDGMEKRYRQVMHVKPMMSER 36
           +L +A EA+ L DELR RIE+G+E RY+QVM VK +M+ R
Sbjct: 339 SLRSAGEANMLGDELRGRIENGIENRYKQVMKVKLIMTHR 378


>ref|XP_002520332.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540551|gb|EEF42118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/97 (65%), Positives = 81/97 (83%), Gaps = 1/97 (1%)
 Frame = -1

Query: 332 VEMMRRMKSMNHGIPTTSSYTPVIHALCEAGRVLEARDFLAELVNEGSVPREYTYKLVCN 153
           VEM+RRM++MNHG+ T+SSYTP+IHALCEA RVLEARDFL ELV+ GS+PREYTYKLVC 
Sbjct: 339 VEMLRRMQNMNHGLATSSSYTPIIHALCEADRVLEARDFLLELVDGGSIPREYTYKLVCE 398

Query: 152 ALSAADEASL-PDELRRRIEDGMEKRYRQVMHVKPMM 45
            + +A E +L  DE   RI+DG+++R+RQV  VKP+M
Sbjct: 399 TMKSAREVNLIDDEFHNRIKDGIDERFRQVKKVKPIM 435


>ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
           gi|449518241|ref|XP_004166151.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
          Length = 445

 Score =  130 bits (328), Expect = 8e-29
 Identities = 63/100 (63%), Positives = 81/100 (81%), Gaps = 1/100 (1%)
 Frame = -1

Query: 332 VEMMRRMKSMNHGIPTTSSYTPVIHALCEAGRVLEARDFLAELVNEGSVPREYTYKLVCN 153
           ++M+R M+ MNHGI T+SSYTP+IHALCE G+V+EARDFL EL+ EGSVPREYTY+LVCN
Sbjct: 344 IKMLRMMQKMNHGIATSSSYTPIIHALCEGGKVIEARDFLLELLEEGSVPREYTYQLVCN 403

Query: 152 ALSAADEASLPDE-LRRRIEDGMEKRYRQVMHVKPMMSER 36
            L++A +ASL DE +  RI  G+E RYR+V  VK +MS +
Sbjct: 404 LLNSAGKASLLDENVHERIRHGIENRYREVKKVKLIMSRK 443


>ref|XP_003553291.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Glycine max]
          Length = 732

 Score =  122 bits (305), Expect = 4e-26
 Identities = 61/102 (59%), Positives = 77/102 (75%), Gaps = 3/102 (2%)
 Frame = -1

Query: 332 VEMMRRMKSMNHGIPTTSSYTPVIHALCEAGRVLEARDFLAELVNEGSVPREYTYKLVCN 153
           VEM+R M+ + HG+P +SSYTP+IHALCEAGRV+EA  FL ELV  GSVPREYTY LVC+
Sbjct: 622 VEMLREMQRLGHGVPGSSSYTPIIHALCEAGRVVEAWWFLVELVEGGSVPREYTYGLVCD 681

Query: 152 ALSAADEASL---PDELRRRIEDGMEKRYRQVMHVKPMMSER 36
            L AA E  L    D + +RI+DG+  RYRQ+M VKP+M+ +
Sbjct: 682 RLRAAGEGGLLEDHDGVHKRIKDGIWNRYRQMMKVKPVMARK 723