BLASTX nr result

ID: Coptis24_contig00026799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026799
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325662.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_003519274.1| PREDICTED: protein LURP-one-related 7-like [...    93   3e-17
ref|XP_003544911.1| PREDICTED: protein LURP-one-related 7-like [...    88   6e-16
gb|AER92596.1| hypothetical protein [Linum usitatissimum]              88   8e-16
emb|CBI15857.3| unnamed protein product [Vitis vinifera]               84   1e-14

>ref|XP_002325662.1| predicted protein [Populus trichocarpa] gi|222862537|gb|EEF00044.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/101 (51%), Positives = 67/101 (66%)
 Frame = -3

Query: 304 WQGCRGDSRECKDLIFKVKKSTLQSFLRKDLEVLLFGEYCGEPCPGLKIRGSTFHRSCTI 125
           WQG +G     KDLIF+VK+ T++   R +LEV L GE   E  P  K++G  F RSCTI
Sbjct: 64  WQGFKGGDNREKDLIFRVKR-TVKKLTRTELEVFLVGEISRESTPDFKVKGFPFQRSCTI 122

Query: 124 YQGNSIIAQTSLLYKLHTVTIXXXXXRLTIFPGLFDHALLA 2
           Y+ +SI+AQTSL+YKLH +       RLTIFPG  DH+L+A
Sbjct: 123 YRSDSIVAQTSLMYKLHQIYARRSKYRLTIFPGSVDHSLIA 163


>ref|XP_003519274.1| PREDICTED: protein LURP-one-related 7-like [Glycine max]
          Length = 197

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/118 (41%), Positives = 74/118 (62%)
 Frame = -3

Query: 358 STLYAVLL*HQAP*SPVGWQGCRGDSRECKDLIFKVKKSTLQSFLRKDLEVLLFGEYCGE 179
           +TL+++   H        W+  +G+S E K+L+F V++ TL++  R +LEVL   E   +
Sbjct: 74  NTLFSIYRYHNG-----SWKCYKGNSEENKELVFSVQR-TLKTITRVELEVLFEAERSND 127

Query: 178 PCPGLKIRGSTFHRSCTIYQGNSIIAQTSLLYKLHTVTIXXXXXRLTIFPGLFDHALL 5
            C  LK++GS F RSC IY+   ++AQ+SL+YKLH + +     RLTIFPG  DHAL+
Sbjct: 128 ECCDLKVKGSPFKRSCCIYKHVDLVAQSSLMYKLHQIHVSRGKFRLTIFPGTIDHALI 185


>ref|XP_003544911.1| PREDICTED: protein LURP-one-related 7-like [Glycine max]
          Length = 197

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/118 (40%), Positives = 73/118 (61%)
 Frame = -3

Query: 358 STLYAVLL*HQAP*SPVGWQGCRGDSRECKDLIFKVKKSTLQSFLRKDLEVLLFGEYCGE 179
           +TL+++   H        W+  +G+S E K+L+F V++ TL++  R +LEVL   E   +
Sbjct: 74  NTLFSIYRYHNG-----SWKCYKGNSDENKELVFSVQR-TLKTLTRVELEVLFAAERSND 127

Query: 178 PCPGLKIRGSTFHRSCTIYQGNSIIAQTSLLYKLHTVTIXXXXXRLTIFPGLFDHALL 5
               LK++GS F RSC IY+   ++AQ+SL+YKLH + +     RLTIFPG  DHAL+
Sbjct: 128 EGCDLKVKGSPFQRSCCIYKDADLVAQSSLMYKLHQMFVSRSKFRLTIFPGTIDHALI 185


>gb|AER92596.1| hypothetical protein [Linum usitatissimum]
          Length = 195

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 46/101 (45%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
 Frame = -3

Query: 304 WQGCRGDSRECKDLIFKVKKSTLQSFLRKDLEVLLFGEYC-GEPCPGLKIRGSTFHRSCT 128
           W+G  G     K+++F+V++ T+    R + EV L GE    +  P  K++G  F RSCT
Sbjct: 87  WEGFEGGEDTEKEMLFRVQR-TVNKLCRTEFEVFLAGESSQDQSSPDFKVKGCCFQRSCT 145

Query: 127 IYQGNSIIAQTSLLYKLHTVTIXXXXXRLTIFPGLFDHALL 5
           IY G+SI+AQTSL+YKLH V       RLT+FPG  DHAL+
Sbjct: 146 IYGGDSIVAQTSLMYKLHEVHASRSKFRLTVFPGSIDHALV 186


>emb|CBI15857.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 48/100 (48%), Positives = 63/100 (63%)
 Frame = -3

Query: 304 WQGCRGDSRECKDLIFKVKKSTLQSFLRKDLEVLLFGEYCGEPCPGLKIRGSTFHRSCTI 125
           WQ  RGD    +DLIF+V++ TL +  R +  + L G  C E     K++G  F RSCTI
Sbjct: 308 WQCFRGDGSG-EDLIFRVER-TLNTLTRTEFNIFLGGANC-EDSTDFKMKGCPFQRSCTI 364

Query: 124 YQGNSIIAQTSLLYKLHTVTIXXXXXRLTIFPGLFDHALL 5
           Y+GNSI+AQTSL+YKL    +     RLTIFPG  DHA++
Sbjct: 365 YKGNSIVAQTSLMYKLGKAFVGRCKFRLTIFPGSGDHAVV 404


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