BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026767
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589672.1| Pre-rRNA-processing protein IPI3 [Medicago t...    65   6e-14
ref|XP_003531886.1| PREDICTED: WD repeat-containing protein 18-l...    64   1e-13
ref|XP_003551778.1| PREDICTED: WD repeat-containing protein 18-l...    64   1e-13
ref|XP_002284832.1| PREDICTED: WD repeat-containing protein 18 [...    62   5e-13
ref|XP_002327154.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-12

>ref|XP_003589672.1| Pre-rRNA-processing protein IPI3 [Medicago truncatula]
           gi|355478720|gb|AES59923.1| Pre-rRNA-processing protein
           IPI3 [Medicago truncatula]
          Length = 393

 Score = 65.5 bits (158), Expect(2) = 6e-14
 Identities = 29/51 (56%), Positives = 42/51 (82%)
 Frame = +2

Query: 71  LFNVIEIQKAK*PYEHSFSEHTLRVTYVVCGTGGCSAIVISASEDQTCKLY 223
           LF+ +  ++ K  YE+SFSEHT+RVT VV G GGC+AI++SAS+D+TCK++
Sbjct: 105 LFDDLRSREEKNLYEYSFSEHTMRVTDVVIGNGGCNAIIVSASDDRTCKVW 155



 Score = 36.6 bits (83), Expect(2) = 6e-14
 Identities = 17/22 (77%), Positives = 18/22 (81%)
 Frame = +1

Query: 1   SDDKSLLISGSEDGSVCVWSFY 66
           SDD SLLISGSEDG V VWS +
Sbjct: 82  SDDDSLLISGSEDGYVRVWSLF 103


>ref|XP_003531886.1| PREDICTED: WD repeat-containing protein 18-like [Glycine max]
          Length = 449

 Score = 64.3 bits (155), Expect(2) = 1e-13
 Identities = 29/51 (56%), Positives = 40/51 (78%)
 Frame = +2

Query: 71  LFNVIEIQKAK*PYEHSFSEHTLRVTYVVCGTGGCSAIVISASEDQTCKLY 223
           +F+ +  Q+A   YE+SFSEHTL VT VV G GGC+AI++SAS D+TCK++
Sbjct: 152 IFDDLRCQQASNLYEYSFSEHTLTVTDVVIGNGGCNAIIVSASNDRTCKVW 202



 Score = 37.0 bits (84), Expect(2) = 1e-13
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = +1

Query: 1   SDDKSLLISGSEDGSVCVWSFY 66
           S+D SLL+SGSEDGSV VWS +
Sbjct: 129 SEDDSLLVSGSEDGSVRVWSLF 150


>ref|XP_003551778.1| PREDICTED: WD repeat-containing protein 18-like [Glycine max]
          Length = 449

 Score = 63.9 bits (154), Expect(2) = 1e-13
 Identities = 29/51 (56%), Positives = 41/51 (80%)
 Frame = +2

Query: 71  LFNVIEIQKAK*PYEHSFSEHTLRVTYVVCGTGGCSAIVISASEDQTCKLY 223
           +F+ +  Q+A   YE+SFSEHTL VT VV G GGC+AI++SAS+D+TCK++
Sbjct: 152 IFDDLRNQQASSLYEYSFSEHTLTVTDVVIGNGGCNAIIVSASKDRTCKVW 202



 Score = 37.0 bits (84), Expect(2) = 1e-13
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = +1

Query: 1   SDDKSLLISGSEDGSVCVWSFY 66
           S+D SLL+SGSEDGSV VWS +
Sbjct: 129 SEDDSLLVSGSEDGSVRVWSLF 150


>ref|XP_002284832.1| PREDICTED: WD repeat-containing protein 18 [Vitis vinifera]
           gi|302142303|emb|CBI19506.3| unnamed protein product
           [Vitis vinifera]
          Length = 448

 Score = 62.4 bits (150), Expect(2) = 5e-13
 Identities = 29/51 (56%), Positives = 41/51 (80%)
 Frame = +2

Query: 71  LFNVIEIQKAK*PYEHSFSEHTLRVTYVVCGTGGCSAIVISASEDQTCKLY 223
           +F+ +  ++A   YEHSFSEHTLRVT +V G GG +AI++SASED+TCK++
Sbjct: 157 IFDDLRREEAGHLYEHSFSEHTLRVTDIVTGYGGGNAIIVSASEDRTCKVW 207



 Score = 36.6 bits (83), Expect(2) = 5e-13
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = +1

Query: 1   SDDKSLLISGSEDGSVCVWSFY 66
           SDD+SLLISG+EDG V VWS +
Sbjct: 134 SDDESLLISGAEDGCVRVWSLF 155


>ref|XP_002327154.1| predicted protein [Populus trichocarpa] gi|222835469|gb|EEE73904.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 64.3 bits (155), Expect(2) = 1e-12
 Identities = 30/55 (54%), Positives = 42/55 (76%)
 Frame = +2

Query: 59  PSTKLFNVIEIQKAK*PYEHSFSEHTLRVTYVVCGTGGCSAIVISASEDQTCKLY 223
           P   +F+  ++++A   YEHSF EHTLRVT +V G GG +AI+ISASED+TCK++
Sbjct: 149 PLLMIFDDYQMEQASQLYEHSFQEHTLRVTDIVTGYGGGNAIIISASEDRTCKVW 203



 Score = 33.1 bits (74), Expect(2) = 1e-12
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +1

Query: 1   SDDKSLLISGSEDGSVCVW 57
           ++D SLL+SGSEDGSV VW
Sbjct: 130 TEDDSLLVSGSEDGSVRVW 148