BLASTX nr result
ID: Coptis24_contig00026752
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00026752 (671 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273482.2| PREDICTED: rop guanine nucleotide exchange f... 114 2e-23 emb|CBI29214.3| unnamed protein product [Vitis vinifera] 114 2e-23 ref|XP_003547820.1| PREDICTED: rop guanine nucleotide exchange f... 110 3e-22 emb|CAN76404.1| hypothetical protein VITISV_021238 [Vitis vinifera] 107 3e-21 ref|XP_002326784.1| predicted protein [Populus trichocarpa] gi|2... 106 5e-21 >ref|XP_002273482.2| PREDICTED: rop guanine nucleotide exchange factor 1-like [Vitis vinifera] Length = 570 Score = 114 bits (284), Expect = 2e-23 Identities = 65/137 (47%), Positives = 84/137 (61%), Gaps = 5/137 (3%) Frame = +2 Query: 275 IIIMRKRLACCHPFANSNNISVDLDVEPEKIMTYNGLESCILNSCKYDDESSTSRTDGCV 454 +++MR+RLACC +S+DLD E E+IMTYNGLE+CILN Y++ES TSR DGC Sbjct: 2 MMVMRRRLACC---TRERELSLDLD-EQERIMTYNGLENCILNGHSYENESHTSRGDGCA 57 Query: 455 TDFLXXXXXXXXXXXXXXXXXXXQCLV-----NKHGLDEQEEISKSPQHMYLKEKQSISI 619 TD L + L ++HGLDE E+ +SPQH Y+KEK S+ Sbjct: 58 TDSLDEDDTSCSSSKDAFGSFSSKWLTMNMKKDEHGLDEW-EVPESPQHFYVKEKPGYSV 116 Query: 620 QTFDVETMKEKFSKLLL 670 + DVE MKE+FSKLLL Sbjct: 117 RFSDVEVMKERFSKLLL 133 >emb|CBI29214.3| unnamed protein product [Vitis vinifera] Length = 912 Score = 114 bits (284), Expect = 2e-23 Identities = 65/137 (47%), Positives = 84/137 (61%), Gaps = 5/137 (3%) Frame = +2 Query: 275 IIIMRKRLACCHPFANSNNISVDLDVEPEKIMTYNGLESCILNSCKYDDESSTSRTDGCV 454 +++MR+RLACC +S+DLD E E+IMTYNGLE+CILN Y++ES TSR DGC Sbjct: 1 MMVMRRRLACC---TRERELSLDLD-EQERIMTYNGLENCILNGHSYENESHTSRGDGCA 56 Query: 455 TDFLXXXXXXXXXXXXXXXXXXXQCLV-----NKHGLDEQEEISKSPQHMYLKEKQSISI 619 TD L + L ++HGLDE E+ +SPQH Y+KEK S+ Sbjct: 57 TDSLDEDDTSCSSSKDAFGSFSSKWLTMNMKKDEHGLDEW-EVPESPQHFYVKEKPGYSV 115 Query: 620 QTFDVETMKEKFSKLLL 670 + DVE MKE+FSKLLL Sbjct: 116 RFSDVEVMKERFSKLLL 132 >ref|XP_003547820.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Glycine max] Length = 555 Score = 110 bits (274), Expect = 3e-22 Identities = 65/134 (48%), Positives = 81/134 (60%), Gaps = 4/134 (2%) Frame = +2 Query: 281 IMRKRLACCHPFANSNNISVDLDVEPEKIMTYNGLESCILNSCKYDDESSTSRTDGCVTD 460 +MRKRLACC A IS+D D EPE+IMTYNGLE+CI ++ Y DES TSR DGC+TD Sbjct: 3 LMRKRLACCTKEAK---ISIDFD-EPERIMTYNGLENCIPDNQSYGDESRTSRGDGCITD 58 Query: 461 FLXXXXXXXXXXXXXXXXXXXQCLVNK---HGLDEQEEISKSPQHMYLKEKQSIS-IQTF 628 +CL K HGL+E E+++SPQH YLK+K + + Sbjct: 59 SFNDDDSSSSSSKDAFGSFSSKCLTMKRDDHGLEEW-ELTESPQHFYLKDKSAFDVVNCS 117 Query: 629 DVETMKEKFSKLLL 670 DVE MKEKF+KL L Sbjct: 118 DVEAMKEKFAKLFL 131 >emb|CAN76404.1| hypothetical protein VITISV_021238 [Vitis vinifera] Length = 1036 Score = 107 bits (266), Expect = 3e-21 Identities = 63/137 (45%), Positives = 82/137 (59%), Gaps = 5/137 (3%) Frame = +2 Query: 275 IIIMRKRLACCHPFANSNNISVDLDVEPEKIMTYNGLESCILNSCKYDDESSTSRTDGCV 454 +++ R+RLACC +S+DLD + E+IMTYNGLE+CILN Y++ES TSR DGC Sbjct: 82 MMMRRRRLACC---TWERELSLDLD-DQERIMTYNGLENCILNGHSYENESHTSRGDGCA 137 Query: 455 TDFLXXXXXXXXXXXXXXXXXXXQCLV-----NKHGLDEQEEISKSPQHMYLKEKQSISI 619 TD L + L ++HGLDE E+ +SPQH Y+KEK S Sbjct: 138 TDSLDEDDSSCSSSKDAFGSFSSKWLTMNMKKDEHGLDEW-EVPESPQHFYVKEKPGYSF 196 Query: 620 QTFDVETMKEKFSKLLL 670 + DVE MKE+FSKLLL Sbjct: 197 RFSDVEVMKERFSKLLL 213 >ref|XP_002326784.1| predicted protein [Populus trichocarpa] gi|222834106|gb|EEE72583.1| predicted protein [Populus trichocarpa] Length = 568 Score = 106 bits (264), Expect = 5e-21 Identities = 65/136 (47%), Positives = 85/136 (62%), Gaps = 4/136 (2%) Frame = +2 Query: 275 IIIMRKRLACCHPFANSNNISVDLDVEPEKIMTYNGLESCILNSCKYDDESSTSRTDGCV 454 ++I+R+RLACC IS+D D + E+IMTYNGLESCI+N+ Y++ES TSR +GCV Sbjct: 1 MMILRRRLACC---TRDREISLDFDKQ-ERIMTYNGLESCIINNQSYENESGTSRGEGCV 56 Query: 455 TD-FLXXXXXXXXXXXXXXXXXXXQCLVNK---HGLDEQEEISKSPQHMYLKEKQSISIQ 622 +D F + L K HGL++ E+++SPQH Y KEK SIQ Sbjct: 57 SDSFDDDGCSSCSSSKDAFGSFSSKWLTMKKDEHGLNDW-ELARSPQHFYDKEKPCYSIQ 115 Query: 623 TFDVETMKEKFSKLLL 670 DVETMKEKF+KLLL Sbjct: 116 YSDVETMKEKFAKLLL 131