BLASTX nr result

ID: Coptis24_contig00026752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026752
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273482.2| PREDICTED: rop guanine nucleotide exchange f...   114   2e-23
emb|CBI29214.3| unnamed protein product [Vitis vinifera]              114   2e-23
ref|XP_003547820.1| PREDICTED: rop guanine nucleotide exchange f...   110   3e-22
emb|CAN76404.1| hypothetical protein VITISV_021238 [Vitis vinifera]   107   3e-21
ref|XP_002326784.1| predicted protein [Populus trichocarpa] gi|2...   106   5e-21

>ref|XP_002273482.2| PREDICTED: rop guanine nucleotide exchange factor 1-like [Vitis
           vinifera]
          Length = 570

 Score =  114 bits (284), Expect = 2e-23
 Identities = 65/137 (47%), Positives = 84/137 (61%), Gaps = 5/137 (3%)
 Frame = +2

Query: 275 IIIMRKRLACCHPFANSNNISVDLDVEPEKIMTYNGLESCILNSCKYDDESSTSRTDGCV 454
           +++MR+RLACC        +S+DLD E E+IMTYNGLE+CILN   Y++ES TSR DGC 
Sbjct: 2   MMVMRRRLACC---TRERELSLDLD-EQERIMTYNGLENCILNGHSYENESHTSRGDGCA 57

Query: 455 TDFLXXXXXXXXXXXXXXXXXXXQCLV-----NKHGLDEQEEISKSPQHMYLKEKQSISI 619
           TD L                   + L      ++HGLDE  E+ +SPQH Y+KEK   S+
Sbjct: 58  TDSLDEDDTSCSSSKDAFGSFSSKWLTMNMKKDEHGLDEW-EVPESPQHFYVKEKPGYSV 116

Query: 620 QTFDVETMKEKFSKLLL 670
           +  DVE MKE+FSKLLL
Sbjct: 117 RFSDVEVMKERFSKLLL 133


>emb|CBI29214.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  114 bits (284), Expect = 2e-23
 Identities = 65/137 (47%), Positives = 84/137 (61%), Gaps = 5/137 (3%)
 Frame = +2

Query: 275 IIIMRKRLACCHPFANSNNISVDLDVEPEKIMTYNGLESCILNSCKYDDESSTSRTDGCV 454
           +++MR+RLACC        +S+DLD E E+IMTYNGLE+CILN   Y++ES TSR DGC 
Sbjct: 1   MMVMRRRLACC---TRERELSLDLD-EQERIMTYNGLENCILNGHSYENESHTSRGDGCA 56

Query: 455 TDFLXXXXXXXXXXXXXXXXXXXQCLV-----NKHGLDEQEEISKSPQHMYLKEKQSISI 619
           TD L                   + L      ++HGLDE  E+ +SPQH Y+KEK   S+
Sbjct: 57  TDSLDEDDTSCSSSKDAFGSFSSKWLTMNMKKDEHGLDEW-EVPESPQHFYVKEKPGYSV 115

Query: 620 QTFDVETMKEKFSKLLL 670
           +  DVE MKE+FSKLLL
Sbjct: 116 RFSDVEVMKERFSKLLL 132


>ref|XP_003547820.1| PREDICTED: rop guanine nucleotide exchange factor 1-like [Glycine
           max]
          Length = 555

 Score =  110 bits (274), Expect = 3e-22
 Identities = 65/134 (48%), Positives = 81/134 (60%), Gaps = 4/134 (2%)
 Frame = +2

Query: 281 IMRKRLACCHPFANSNNISVDLDVEPEKIMTYNGLESCILNSCKYDDESSTSRTDGCVTD 460
           +MRKRLACC   A    IS+D D EPE+IMTYNGLE+CI ++  Y DES TSR DGC+TD
Sbjct: 3   LMRKRLACCTKEAK---ISIDFD-EPERIMTYNGLENCIPDNQSYGDESRTSRGDGCITD 58

Query: 461 FLXXXXXXXXXXXXXXXXXXXQCLVNK---HGLDEQEEISKSPQHMYLKEKQSIS-IQTF 628
                                +CL  K   HGL+E  E+++SPQH YLK+K +   +   
Sbjct: 59  SFNDDDSSSSSSKDAFGSFSSKCLTMKRDDHGLEEW-ELTESPQHFYLKDKSAFDVVNCS 117

Query: 629 DVETMKEKFSKLLL 670
           DVE MKEKF+KL L
Sbjct: 118 DVEAMKEKFAKLFL 131


>emb|CAN76404.1| hypothetical protein VITISV_021238 [Vitis vinifera]
          Length = 1036

 Score =  107 bits (266), Expect = 3e-21
 Identities = 63/137 (45%), Positives = 82/137 (59%), Gaps = 5/137 (3%)
 Frame = +2

Query: 275 IIIMRKRLACCHPFANSNNISVDLDVEPEKIMTYNGLESCILNSCKYDDESSTSRTDGCV 454
           +++ R+RLACC        +S+DLD + E+IMTYNGLE+CILN   Y++ES TSR DGC 
Sbjct: 82  MMMRRRRLACC---TWERELSLDLD-DQERIMTYNGLENCILNGHSYENESHTSRGDGCA 137

Query: 455 TDFLXXXXXXXXXXXXXXXXXXXQCLV-----NKHGLDEQEEISKSPQHMYLKEKQSISI 619
           TD L                   + L      ++HGLDE  E+ +SPQH Y+KEK   S 
Sbjct: 138 TDSLDEDDSSCSSSKDAFGSFSSKWLTMNMKKDEHGLDEW-EVPESPQHFYVKEKPGYSF 196

Query: 620 QTFDVETMKEKFSKLLL 670
           +  DVE MKE+FSKLLL
Sbjct: 197 RFSDVEVMKERFSKLLL 213


>ref|XP_002326784.1| predicted protein [Populus trichocarpa] gi|222834106|gb|EEE72583.1|
           predicted protein [Populus trichocarpa]
          Length = 568

 Score =  106 bits (264), Expect = 5e-21
 Identities = 65/136 (47%), Positives = 85/136 (62%), Gaps = 4/136 (2%)
 Frame = +2

Query: 275 IIIMRKRLACCHPFANSNNISVDLDVEPEKIMTYNGLESCILNSCKYDDESSTSRTDGCV 454
           ++I+R+RLACC        IS+D D + E+IMTYNGLESCI+N+  Y++ES TSR +GCV
Sbjct: 1   MMILRRRLACC---TRDREISLDFDKQ-ERIMTYNGLESCIINNQSYENESGTSRGEGCV 56

Query: 455 TD-FLXXXXXXXXXXXXXXXXXXXQCLVNK---HGLDEQEEISKSPQHMYLKEKQSISIQ 622
           +D F                    + L  K   HGL++  E+++SPQH Y KEK   SIQ
Sbjct: 57  SDSFDDDGCSSCSSSKDAFGSFSSKWLTMKKDEHGLNDW-ELARSPQHFYDKEKPCYSIQ 115

Query: 623 TFDVETMKEKFSKLLL 670
             DVETMKEKF+KLLL
Sbjct: 116 YSDVETMKEKFAKLLL 131


Top