BLASTX nr result

ID: Coptis24_contig00026748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026748
         (812 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305604.1| predicted protein [Populus trichocarpa] gi|2...   131   2e-28
ref|XP_004145101.1| PREDICTED: uncharacterized protein LOC101211...   127   2e-27
ref|XP_002266933.1| PREDICTED: uncharacterized protein LOC100258...   127   3e-27
ref|XP_002518522.1| conserved hypothetical protein [Ricinus comm...   121   2e-25
ref|XP_003536549.1| PREDICTED: uncharacterized protein LOC100788...   119   6e-25

>ref|XP_002305604.1| predicted protein [Populus trichocarpa] gi|222848568|gb|EEE86115.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  131 bits (330), Expect = 2e-28
 Identities = 62/89 (69%), Positives = 73/89 (82%)
 Frame = -1

Query: 812 KIKGIYRGFKCLSQIFVVKERELEIGYPTDVKHVAHIGWDGQSDNAPSWMKEFKTAPDFS 633
           KIKGIY+GFK +SQIFVVKERE+EIGYPTDVKHVAHIGWDG S +APSWM EFKT PDFS
Sbjct: 4   KIKGIYKGFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGHSGSAPSWMNEFKTPPDFS 63

Query: 632 TVSVSDKSASRNSNGVTAPSWSSRDFDQN 546
           T +V++    R+S+ V    WSS+DFD +
Sbjct: 64  TTTVAN---PRDSSSVILSPWSSQDFDHS 89


>ref|XP_004145101.1| PREDICTED: uncharacterized protein LOC101211354 [Cucumis sativus]
           gi|449472647|ref|XP_004153657.1| PREDICTED:
           uncharacterized protein LOC101222050 [Cucumis sativus]
           gi|449526766|ref|XP_004170384.1| PREDICTED:
           uncharacterized LOC101222050 [Cucumis sativus]
          Length = 159

 Score =  127 bits (320), Expect = 2e-27
 Identities = 69/107 (64%), Positives = 78/107 (72%), Gaps = 10/107 (9%)
 Frame = -1

Query: 812 KIKGIYRGFKCLSQIFVVKERELEIGYPTDVKHVAHIGWDGQSDNAPSWMKEFKTAPD-F 636
           K+KGIY+ FK +SQIFVVKERE+EIGYPTDVKHVAHIGWDG S  APSWM EFKTAP+ F
Sbjct: 4   KLKGIYKSFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGTAPSWMNEFKTAPEHF 63

Query: 635 STVSVSDKSASRNSN--GVTAP-SWSSRDFD------QNSDIYKESP 522
           S  S  D S  R+S+   VTAP +WSS DFD      Q SD + E P
Sbjct: 64  SAASFGDISDRRDSSSTAVTAPTTWSSLDFDQAMLRQQTSDFFGELP 110


>ref|XP_002266933.1| PREDICTED: uncharacterized protein LOC100258839 [Vitis vinifera]
           gi|302144074|emb|CBI23179.3| unnamed protein product
           [Vitis vinifera]
          Length = 160

 Score =  127 bits (319), Expect = 3e-27
 Identities = 63/108 (58%), Positives = 83/108 (76%), Gaps = 7/108 (6%)
 Frame = -1

Query: 812 KIKGIYRGFKCLSQIFVVKERELEIGYPTDVKHVAHIGWDGQSDNAPSWMKEFKTAPDFS 633
           K+KGIY+GFK +SQIFVVKERE+EIGYPTDVKHVAHIGWDG S +APSWM E+K+  DFS
Sbjct: 4   KMKGIYKGFKYISQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGSAPSWMNEYKSTHDFS 63

Query: 632 TVSVSDKSASRNSNGVTAPS-WSSRDFDQN------SDIYKESPSPTE 510
           + S+      R++N + A S WSS+DF+Q+      S+++K+ P PT+
Sbjct: 64  SSSLGSFIEPRDTNNIVARSTWSSQDFEQSMGQHPVSEMFKDCP-PTD 110


>ref|XP_002518522.1| conserved hypothetical protein [Ricinus communis]
           gi|223542367|gb|EEF43909.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score =  121 bits (303), Expect = 2e-25
 Identities = 60/91 (65%), Positives = 76/91 (83%), Gaps = 2/91 (2%)
 Frame = -1

Query: 812 KIKGIYRG-FKCLSQIFVVKERELEIGYPTDVKHVAHIGWDGQSDNAPSWMKEFKTAPDF 636
           KIKGIY+G FK +SQIFVVKERE+EIGYPTDVKHVAHIGWDG S +APSWM +FKT PDF
Sbjct: 4   KIKGIYKGSFKFISQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGSAPSWMNDFKTPPDF 63

Query: 635 STVSVSDKSASRNSNGVTAPS-WSSRDFDQN 546
           S+ ++++   +R+S+ +   S WSS+DFDQ+
Sbjct: 64  SSTTLAN---TRDSDSIANFSPWSSQDFDQS 91


>ref|XP_003536549.1| PREDICTED: uncharacterized protein LOC100788423 [Glycine max]
          Length = 186

 Score =  119 bits (299), Expect = 6e-25
 Identities = 62/104 (59%), Positives = 75/104 (72%), Gaps = 7/104 (6%)
 Frame = -1

Query: 809 IKGIYRGFKCLSQIFVVKERELEIGYPTDVKHVAHIGWDGQSDNAPSWMKEFKTAPDFST 630
           +KGIY+ FK ++QIFVVKERE+EIGYPTDVKHVAHIGWDG S   PSWM +FKTAPDFST
Sbjct: 5   LKGIYKSFKYITQIFVVKEREMEIGYPTDVKHVAHIGWDGPSGTGPSWMNDFKTAPDFST 64

Query: 629 -VSVSDKSASRNSNGVTAPSWSSRDFD------QNSDIYKESPS 519
            +    + +  N+  VT  SWSS+DF+        S+IYK  PS
Sbjct: 65  SLGNLGELSDPNAMAVTT-SWSSQDFEVSTGSQPTSNIYKGIPS 107


Top