BLASTX nr result

ID: Coptis24_contig00026744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026744
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264730.2| PREDICTED: uncharacterized protein LOC100250...   120   1e-25
emb|CAN67303.1| hypothetical protein VITISV_000736 [Vitis vinifera]   120   1e-25
ref|XP_002529792.1| conserved hypothetical protein [Ricinus comm...   110   1e-22
ref|XP_002867758.1| hypothetical protein ARALYDRAFT_914352 [Arab...   103   1e-20
gb|ABK28257.1| unknown [Arabidopsis thaliana]                         103   2e-20

>ref|XP_002264730.2| PREDICTED: uncharacterized protein LOC100250621 [Vitis vinifera]
          Length = 361

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/113 (53%), Positives = 71/113 (62%), Gaps = 7/113 (6%)
 Frame = -3

Query: 318 SEDISQLLYPCWKNSFEKPFLWFGDYHPYLFTNLLRSLLNEDSDDGDDFERSNEKGLSF- 142
           S D++QLLYP W+NS EKPFLW GD+HPYLFTNLLRS L++  DD DD +    +  SF 
Sbjct: 165 SNDVAQLLYPEWRNSLEKPFLWLGDFHPYLFTNLLRSFLDDGDDDDDDGDHEVGETCSFC 224

Query: 141 ------PLAWNRPSTNLVNRVEQIECGLRSMVPCFVDRARKAQCEFIKRGAVD 1
                  +AW  PS  L+ R+EQIEC LR MVP  V R R AQ     R A D
Sbjct: 225 DTPWQILMAWKNPSETLMARIEQIECALRLMVPALVARVRNAQLGLFDRVATD 277


>emb|CAN67303.1| hypothetical protein VITISV_000736 [Vitis vinifera]
          Length = 338

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/113 (53%), Positives = 71/113 (62%), Gaps = 7/113 (6%)
 Frame = -3

Query: 318 SEDISQLLYPCWKNSFEKPFLWFGDYHPYLFTNLLRSLLNEDSDDGDDFERSNEKGLSF- 142
           S D++QLLYP W+NS EKPFLW GD+HPYLFTNLLRS L++  DD DD +    +  SF 
Sbjct: 142 SNDVAQLLYPEWRNSLEKPFLWLGDFHPYLFTNLLRSFLDDGDDDDDDGDHEVGETCSFC 201

Query: 141 ------PLAWNRPSTNLVNRVEQIECGLRSMVPCFVDRARKAQCEFIKRGAVD 1
                  +AW  PS  L+ R+EQIEC LR MVP  V R R AQ     R A D
Sbjct: 202 DTPWQILMAWKNPSETLMARIEQIECALRLMVPALVARVRNAQLGLFDRVATD 254


>ref|XP_002529792.1| conserved hypothetical protein [Ricinus communis]
           gi|223530736|gb|EEF32606.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 274

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/106 (49%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
 Frame = -3

Query: 312 DISQLLYPCWKNSFEKPFLWFGDYHPYLFTNLLRSLLNEDSDDGDDFERSNEKGLSFP-- 139
           ++  LL+P WKNS EKPFL+ GD HPY FTNL+RS L+++++  D+  R       +P  
Sbjct: 79  NLPYLLFPSWKNSLEKPFLFLGDLHPYTFTNLIRSFLDQENNSDDENIRDVVFDRPWPVI 138

Query: 138 LAWNRPSTNLVNRVEQIECGLRSMVPCFVDRARKAQCEFIKRGAVD 1
           +AW  PS NL+N++EQIECGLR +VP  +DR ++AQ  F+ R A D
Sbjct: 139 MAWKDPSRNLINKIEQIECGLRLIVPALMDRYKRAQAGFVGRLAED 184


>ref|XP_002867758.1| hypothetical protein ARALYDRAFT_914352 [Arabidopsis lyrata subsp.
           lyrata] gi|297313594|gb|EFH44017.1| hypothetical protein
           ARALYDRAFT_914352 [Arabidopsis lyrata subsp. lyrata]
          Length = 272

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/103 (48%), Positives = 68/103 (66%), Gaps = 4/103 (3%)
 Frame = -3

Query: 309 ISQLLYPCWKNSFEKPFLWFGDYHPYLFTNLLRSLLNEDSDDGDDFERSNEKGLSFPL-- 136
           I  LL+P W+NS E PFL+ GD HPYL TNLLRS ++ ++ D D+ + ++   ++ PL  
Sbjct: 74  IPYLLFPSWRNSLETPFLFLGDIHPYLLTNLLRSFIDRENQDSDEDDETSLDLMNQPLKM 133

Query: 135 --AWNRPSTNLVNRVEQIECGLRSMVPCFVDRARKAQCEFIKR 13
             AW  PS  LV R++QIEC +R MVP  +DR RKAQ  F+ R
Sbjct: 134 TTAWKDPSDELVKRIDQIECTMRLMVPGLMDRMRKAQRSFVAR 176


>gb|ABK28257.1| unknown [Arabidopsis thaliana]
          Length = 274

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/104 (47%), Positives = 64/104 (61%), Gaps = 5/104 (4%)
 Frame = -3

Query: 309 ISQLLYPCWKNSFEKPFLWFGDYHPYLFTNLLRSLLNEDSDDGDDFERSN-----EKGLS 145
           I  LL+P W+NS E PFL+ GD HPYL TNLLRS ++ ++ D DD +         + L 
Sbjct: 74  IPYLLFPSWRNSLETPFLFLGDIHPYLLTNLLRSFIDRENQDSDDEDEETSLDLVNQPLK 133

Query: 144 FPLAWNRPSTNLVNRVEQIECGLRSMVPCFVDRARKAQCEFIKR 13
             +AW  PS  LV R++QIEC +R MVP  +DR RK Q  F+ R
Sbjct: 134 MTMAWKDPSDELVKRIDQIECTMRLMVPGLMDRMRKTQRSFVAR 177


Top