BLASTX nr result

ID: Coptis24_contig00026733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026733
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532909.1| conserved hypothetical protein [Ricinus comm...   119   3e-25
ref|XP_002306026.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
emb|CBI22264.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_003554683.1| PREDICTED: uncharacterized protein LOC100791...   113   1e-23
gb|AEO31475.1| WRKY transcription factor 11-2 [Dimocarpus longan]     113   2e-23

>ref|XP_002532909.1| conserved hypothetical protein [Ricinus communis]
           gi|223527343|gb|EEF29489.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 386

 Score =  119 bits (297), Expect = 3e-25
 Identities = 57/83 (68%), Positives = 68/83 (81%), Gaps = 1/83 (1%)
 Frame = -2

Query: 248 KNLKVPSRRPSIVCENCLYSRANGMRARAFHILDPRGVLEMVLIFLEERGDGLPQLPSTD 69
           +NLK+PSRRPSIVCENCLYS+    RARAFHI+DPRGVLEM+L+FLE+RGD +   PS D
Sbjct: 180 RNLKLPSRRPSIVCENCLYSQEKDRRARAFHIMDPRGVLEMLLVFLEDRGDRILSHPSLD 239

Query: 68  SK-ESTSVISPFLGRWMGHSITK 3
           S  +S + I PFLG+W GHSITK
Sbjct: 240 SNIDSATRILPFLGKWKGHSITK 262


>ref|XP_002306026.1| predicted protein [Populus trichocarpa] gi|222848990|gb|EEE86537.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/83 (67%), Positives = 68/83 (81%), Gaps = 1/83 (1%)
 Frame = -2

Query: 248 KNLKVPSRRPSIVCENCLYSRANGMRARAFHILDPRGVLEMVLIFLEERGDGLPQLPSTD 69
           KNLK+PSRRPSIVCENCLYS+    RARAFHI+DP+G+LEM+LIFLE+RGDG+P  PS +
Sbjct: 144 KNLKLPSRRPSIVCENCLYSQEKDRRARAFHIMDPKGILEMLLIFLEDRGDGVPFHPSLE 203

Query: 68  S-KESTSVISPFLGRWMGHSITK 3
           S  +S + I P LG+W GHS TK
Sbjct: 204 SNSDSPNRILPLLGKWKGHSQTK 226


>emb|CBI22264.3| unnamed protein product [Vitis vinifera]
          Length = 889

 Score =  116 bits (291), Expect = 2e-24
 Identities = 55/83 (66%), Positives = 70/83 (84%), Gaps = 1/83 (1%)
 Frame = -2

Query: 248 KNLKVPSRRPSIVCENCLYSRANGMRARAFHILDPRGVLEMVLIFLEERGDGLPQLPSTD 69
           KNLK+PSRRPSIVCENCLYS+ + +RARAFHI+DP+G+L+M+ IFLEERG+G    PS D
Sbjct: 204 KNLKLPSRRPSIVCENCLYSQESDLRARAFHIMDPKGILDMLGIFLEERGNGKSFPPSID 263

Query: 68  -SKESTSVISPFLGRWMGHSITK 3
            SK+ T+ I+PFLG+W G S+TK
Sbjct: 264 ISKDKTNRITPFLGKWKGRSVTK 286


>ref|XP_003554683.1| PREDICTED: uncharacterized protein LOC100791812 [Glycine max]
          Length = 406

 Score =  113 bits (283), Expect = 1e-23
 Identities = 53/82 (64%), Positives = 66/82 (80%)
 Frame = -2

Query: 248 KNLKVPSRRPSIVCENCLYSRANGMRARAFHILDPRGVLEMVLIFLEERGDGLPQLPSTD 69
           +NLK+PSRRPS+VCENCLYS    MRARAFHIL+PRG ++M+++FLEER DG P L  + 
Sbjct: 200 RNLKLPSRRPSVVCENCLYSLERDMRARAFHILEPRGTVDMLIVFLEERSDGAPPLLES- 258

Query: 68  SKESTSVISPFLGRWMGHSITK 3
           S++  S I PFLG+W GHSITK
Sbjct: 259 SRDVKSRIIPFLGKWKGHSITK 280


>gb|AEO31475.1| WRKY transcription factor 11-2 [Dimocarpus longan]
          Length = 316

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/83 (63%), Positives = 67/83 (80%), Gaps = 1/83 (1%)
 Frame = -2

Query: 248 KNLKVPSRRPSIVCENCLYSRANGMRARAFHILDPRGVLEMVLIFLEERGDGLPQLPSTD 69
           KNLK+PSRRPSIVCENCLYS+    R RAFH++DP+G L+M+LIF+E+RGDG+   PS  
Sbjct: 111 KNLKLPSRRPSIVCENCLYSQERDRRTRAFHVMDPQGFLDMLLIFIEDRGDGVHFPPSLA 170

Query: 68  SK-ESTSVISPFLGRWMGHSITK 3
           S+ +ST  + PFLG+W GHSITK
Sbjct: 171 SESDSTDRLVPFLGKWKGHSITK 193


Top