BLASTX nr result
ID: Coptis24_contig00026732
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00026732
(478 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002298261.1| predicted protein [Populus trichocarpa] gi|2... 100 5e-35
ref|XP_002515872.1| Serine/threonine-protein kinase PBS1, putati... 97 2e-34
ref|XP_002314261.1| predicted protein [Populus trichocarpa] gi|2... 100 5e-34
ref|XP_002270105.1| PREDICTED: probable receptor-like protein ki... 96 6e-29
ref|XP_002871985.1| kinase family protein [Arabidopsis lyrata su... 77 9e-29
>ref|XP_002298261.1| predicted protein [Populus trichocarpa] gi|222845519|gb|EEE83066.1|
predicted protein [Populus trichocarpa]
Length = 300
Score = 100 bits (249), Expect(3) = 5e-35
Identities = 49/81 (60%), Positives = 63/81 (77%)
Frame = -2
Query: 477 GSLPFFRRFSYEEIKRATGGFSRIIGNHIHGAVYKAQFQDGFVAFVKEMKDLHHGKDVFY 298
G RR SY+++KRAT GF RII ++ HGA Y+A+FQDG VA VKE+KDL+ GKD F+
Sbjct: 22 GPASLVRRLSYKDMKRATDGFRRIIYSNTHGAAYRARFQDGEVALVKEVKDLNQGKDKFF 81
Query: 297 REVKLLADLHHRHLVAHLEGF 235
+EV+LL LHHRHL+A L+GF
Sbjct: 82 KEVQLLGQLHHRHLLA-LKGF 101
Score = 51.6 bits (122), Expect(3) = 5e-35
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -3
Query: 89 DPLKTPLSWRTRMEIAIGVAAALEYLQFF 3
DPLKTPL+W TR++IAIGVAAALEYL F
Sbjct: 125 DPLKTPLNWNTRLQIAIGVAAALEYLLLF 153
Score = 41.2 bits (95), Expect(3) = 5e-35
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -1
Query: 247 LRGFSMGPERFLVFENSENGSLKDHHN 167
L+GFS+G +R LVF+N ENGSLK+H N
Sbjct: 98 LKGFSIGCKRLLVFDNIENGSLKEHLN 124
>ref|XP_002515872.1| Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
gi|223545027|gb|EEF46541.1| Serine/threonine-protein
kinase PBS1, putative [Ricinus communis]
Length = 306
Score = 97.1 bits (240), Expect(3) = 2e-34
Identities = 46/81 (56%), Positives = 61/81 (75%)
Frame = -2
Query: 477 GSLPFFRRFSYEEIKRATGGFSRIIGNHIHGAVYKAQFQDGFVAFVKEMKDLHHGKDVFY 298
G + F RRFSY+++K AT GF RI+ + HG YKA+FQDG++A V E+KDL+ DVF
Sbjct: 26 GPVSFVRRFSYKDLKMATDGFQRIVYSDSHGTAYKARFQDGYIALVMEVKDLNQENDVFI 85
Query: 297 REVKLLADLHHRHLVAHLEGF 235
REV+LL LHHRHL++ L+GF
Sbjct: 86 REVQLLGRLHHRHLLS-LKGF 105
Score = 51.2 bits (121), Expect(3) = 2e-34
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = -3
Query: 89 DPLKTPLSWRTRMEIAIGVAAALEYLQFF 3
DPL+TPL+W+TR++IAIGVAAALEYL F
Sbjct: 129 DPLRTPLNWKTRLQIAIGVAAALEYLLLF 157
Score = 42.7 bits (99), Expect(3) = 2e-34
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = -1
Query: 250 TLRGFSMGPERFLVFENSENGSLKDHHN 167
+L+GFS+G +R LVF+N ENGSLK+H N
Sbjct: 101 SLKGFSIGRKRLLVFDNIENGSLKEHFN 128
>ref|XP_002314261.1| predicted protein [Populus trichocarpa] gi|222850669|gb|EEE88216.1|
predicted protein [Populus trichocarpa]
Length = 273
Score = 100 bits (250), Expect(3) = 5e-34
Identities = 50/75 (66%), Positives = 62/75 (82%)
Frame = -2
Query: 459 RRFSYEEIKRATGGFSRIIGNHIHGAVYKAQFQDGFVAFVKEMKDLHHGKDVFYREVKLL 280
RRFSY++IKRAT GF RII ++ HGA Y+A+FQDG VA VKE+KDL+ GKD F +EV+LL
Sbjct: 2 RRFSYKDIKRATDGFHRIIYSNSHGAAYRARFQDGEVALVKEVKDLNQGKDNFLKEVQLL 61
Query: 279 ADLHHRHLVAHLEGF 235
LHHRHL+A L+GF
Sbjct: 62 GQLHHRHLLA-LKGF 75
Score = 52.4 bits (124), Expect(3) = 5e-34
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = -3
Query: 89 DPLKTPLSWRTRMEIAIGVAAALEYLQFF 3
DPLKTPL+W+TR++IAIGVAAALEYL F
Sbjct: 99 DPLKTPLNWKTRLQIAIGVAAALEYLLLF 127
Score = 36.6 bits (83), Expect(3) = 5e-34
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = -1
Query: 247 LRGFSMGPERFLVFENSENGSLKDHHN 167
L+GFS G +R LV++N E GSLK+H N
Sbjct: 72 LKGFSTGHKRLLVYDNIEMGSLKEHLN 98
>ref|XP_002270105.1| PREDICTED: probable receptor-like protein kinase At1g49730 [Vitis
vinifera] gi|296084850|emb|CBI28259.3| unnamed protein
product [Vitis vinifera]
Length = 301
Score = 96.3 bits (238), Expect(2) = 6e-29
Identities = 50/89 (56%), Positives = 61/89 (68%)
Frame = -2
Query: 477 GSLPFFRRFSYEEIKRATGGFSRIIGNHIHGAVYKAQFQDGFVAFVKEMKDLHHGKDVFY 298
G + F RRFSY++IKRAT GF RI ++ +G YKA FQDG VA VKE+ D + GKD+FY
Sbjct: 22 GPVSFVRRFSYKDIKRATDGFRRISYSNSYGVAYKAIFQDGLVALVKEVGDFNQGKDIFY 81
Query: 297 REVKLLADLHHRHLVAHLEGFQWDLRGFS 211
EV+ L LHHRHL+A LRGFS
Sbjct: 82 GEVQRLGRLHHRHLLA--------LRGFS 102
Score = 56.2 bits (134), Expect(2) = 6e-29
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = -3
Query: 89 DPLKTPLSWRTRMEIAIGVAAALEYLQFF 3
DPLKTPL+WRTR++IAIGVAAALEYLQ F
Sbjct: 125 DPLKTPLNWRTRLQIAIGVAAALEYLQLF 153
>ref|XP_002871985.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297317822|gb|EFH48244.1| kinase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 307
Score = 77.4 bits (189), Expect(3) = 9e-29
Identities = 39/81 (48%), Positives = 55/81 (67%)
Frame = -2
Query: 477 GSLPFFRRFSYEEIKRATGGFSRIIGNHIHGAVYKAQFQDGFVAFVKEMKDLHHGKDVFY 298
G + F RRF Y+EI +AT GF ++I ++ HG+ Y+A+F+ G VA VKE+ L G++ F
Sbjct: 25 GRIEFIRRFGYKEIIKATQGFRKVIYSNYHGSAYRAKFKGGEVALVKELNALDLGRERFD 84
Query: 297 REVKLLADLHHRHLVAHLEGF 235
EV+LL L HRHL+ L GF
Sbjct: 85 EEVQLLGRLRHRHLLT-LRGF 104
Score = 52.0 bits (123), Expect(3) = 9e-29
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = -3
Query: 89 DPLKTPLSWRTRMEIAIGVAAALEYLQFF 3
DPLKTPL+W+TR++IAIGVAAALEYL F
Sbjct: 128 DPLKTPLNWKTRIQIAIGVAAALEYLLIF 156
Score = 42.7 bits (99), Expect(3) = 9e-29
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = -1
Query: 250 TLRGFSMGPERFLVFENSENGSLKDHHN 167
TLRGF +G +R LVF+N ENGSLK+H N
Sbjct: 100 TLRGFCIGRKRLLVFDNIENGSLKEHLN 127