BLASTX nr result

ID: Coptis24_contig00026731 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026731
         (1165 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA88222.1| myb-related transcription factor LBM2 [Nicotiana...   268   2e-69
emb|CAA78387.1| protein 2 [Petunia x hybrida]                         268   2e-69
gb|AAB41101.1| transcription factor Myb1 [Nicotiana tabacum] gi|...   263   5e-68
dbj|BAA88224.1| myb-related transcription factor LBM4 [Nicotiana...   263   6e-68
dbj|BAA88221.1| myb-related transcription factor LBM1 [Nicotiana...   260   5e-67

>dbj|BAA88222.1| myb-related transcription factor LBM2 [Nicotiana tabacum]
          Length = 277

 Score =  268 bits (685), Expect = 2e-69
 Identities = 146/281 (51%), Positives = 184/281 (65%), Gaps = 10/281 (3%)
 Frame = -1

Query: 1138 MGRAPCCEKMGLKRGPWSPEEDHLLIAYIGKNGHGNWRALPKQAGLLRCGKSCRLRWTNY 959
            MGRAPCCEKMGLK+GPW+PEED +LI++I +NGHGNWRALPKQAGLLRCGKSCRLRWTNY
Sbjct: 1    MGRAPCCEKMGLKKGPWTPEEDQILISFIQQNGHGNWRALPKQAGLLRCGKSCRLRWTNY 60

Query: 958  LRPDIKRGNFTREEEDSIINLHEMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLKPSE 779
            LRPDIKRGNFT+EEED+II LHEMLGNRWS IAA+LPGRTDNEIKNVWHTHLKK+LK  +
Sbjct: 61   LRPDIKRGNFTKEEEDTIIQLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLKDYK 120

Query: 778  VTPDTNLHLIKSEANTXXXXXXXXXXXSITFSSPQRFENXXXXXXXXXXXXXXXXSGTE- 602
               +   H  K+  +             +TF   Q+                   S TE 
Sbjct: 121  PPQNPKRH-SKNHDSKGPTTSESSNNSHLTFIYTQK---HIIDSSVPAPNSPQISSSTEM 176

Query: 601  SAIT-GENTKISIKEECSNSWETLPHTDESLWSNVMPME-HFSTMEE--FSTIDINSEVQ 434
            S +T  ++ ++ IK+E   S E  P  DES W++ +  + ++S   +    T D   +VQ
Sbjct: 177  STVTLVDDHQMVIKQEEMESSEYFPEIDESFWTDKLSTDNNWSNTHDHVMVTADQELQVQ 236

Query: 433  LPLSSVSSQ-----TSAIEYGDEFWYNLFTKTEALSDLPEF 326
            LP SS+  +     T+ +E   +FWYN+F KT+ L +LPEF
Sbjct: 237  LPFSSLKEENVDMLTTKMEDDMDFWYNVFIKTDDLPELPEF 277


>emb|CAA78387.1| protein 2 [Petunia x hybrida]
          Length = 280

 Score =  268 bits (685), Expect = 2e-69
 Identities = 148/286 (51%), Positives = 177/286 (61%), Gaps = 15/286 (5%)
 Frame = -1

Query: 1138 MGRAPCCEKMGLKRGPWSPEEDHLLIAYIGKNGHGNWRALPKQAGLLRCGKSCRLRWTNY 959
            MGRAPCCEKMGLK+GPW+PEED +L++YI KNGHGNWRALPK AGLLRCGKSCRLRWTNY
Sbjct: 1    MGRAPCCEKMGLKKGPWTPEEDQILVSYIEKNGHGNWRALPKLAGLLRCGKSCRLRWTNY 60

Query: 958  LRPDIKRGNFTREEEDSIINLHEMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLKPSE 779
            LRPDIKRGNFTREEED+II LHEMLGNRWS IAARLPGRTDNEIKNVWHTHLKKRLK  +
Sbjct: 61   LRPDIKRGNFTREEEDTIIQLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQ 120

Query: 778  VTPDTNLHLIKSEANTXXXXXXXXXXXSITFSSPQRFENXXXXXXXXXXXXXXXXSGTES 599
               ++  H  K+  ++           S +FS+ Q   N                S   S
Sbjct: 121  PPQNSKRH-SKNNHDSKAPSTSKMLDNSESFSTIQENIN----EPMTGPNSPQRSSSESS 175

Query: 598  AITGENTKIS---------IKEECSNSWETLPHTDESLWSNVMPMEHFSTMEEFSTIDIN 446
             +T ++   +         IK E  +S+E  P  DES W+  + M     + +       
Sbjct: 176  TVTADSLAATDVTNDDQTFIKHEEMDSYENFPEIDESFWTEDLSMGDNLDL-DMEVAGEK 234

Query: 445  SEVQLPLS------SVSSQTSAIEYGDEFWYNLFTKTEALSDLPEF 326
            S+VQ P S      SV    + +E   +FWYN+F K E L DLPEF
Sbjct: 235  SQVQFPYSHDMKEQSVDMVGAKLEDDMDFWYNVFIKAEDLLDLPEF 280


>gb|AAB41101.1| transcription factor Myb1 [Nicotiana tabacum]
            gi|6552363|dbj|BAA88223.1| myb-related transcription
            factor LBM3 [Nicotiana tabacum]
          Length = 278

 Score =  263 bits (673), Expect = 5e-68
 Identities = 137/279 (49%), Positives = 176/279 (63%), Gaps = 8/279 (2%)
 Frame = -1

Query: 1138 MGRAPCCEKMGLKRGPWSPEEDHLLIAYIGKNGHGNWRALPKQAGLLRCGKSCRLRWTNY 959
            M RAPCCEKMGLK+GPW PEED +LI++I  NGHGNWRALPKQAGLLRCGKSCRLRWTNY
Sbjct: 1    MVRAPCCEKMGLKKGPWIPEEDQILISFIQTNGHGNWRALPKQAGLLRCGKSCRLRWTNY 60

Query: 958  LRPDIKRGNFTREEEDSIINLHEMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLKPSE 779
            LRPDIKRGNFT+EEE++II LHEMLGNRWS IAA+LPGRTDNEIKNVWHTHLKK+LK  +
Sbjct: 61   LRPDIKRGNFTKEEEETIIQLHEMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLKDYK 120

Query: 778  VTPDTNLH-LIKSEANTXXXXXXXXXXXSITFSSPQRFENXXXXXXXXXXXXXXXXSGTE 602
               ++  H   K+  +             +T  + Q+  +                  T 
Sbjct: 121  PPQNSKRHSKSKNHDSKGPTTSESSNNSDLTIINTQKHIDSPVLAPNSPQISSSTEMSTV 180

Query: 601  SAITGENTKISIKEECSNSWETLPHTDESLWSNVMPMEHFSTMEEFSTIDINSE--VQLP 428
            + +  ++  + IK+E   S E  P  DES W++ +  ++  +  +   +  N E  VQLP
Sbjct: 181  T-LVDDHQMVVIKQEVMESSEYFPEIDESFWTDELTTDNNWSSTDHVMVAANQELQVQLP 239

Query: 427  LSSVSSQ-----TSAIEYGDEFWYNLFTKTEALSDLPEF 326
             SS   +      + +E   +FWYN+F KT+ L +LPEF
Sbjct: 240  FSSFKEENVDILATKMEDDMDFWYNVFIKTDDLPELPEF 278


>dbj|BAA88224.1| myb-related transcription factor LBM4 [Nicotiana tabacum]
          Length = 281

 Score =  263 bits (672), Expect = 6e-68
 Identities = 144/289 (49%), Positives = 177/289 (61%), Gaps = 18/289 (6%)
 Frame = -1

Query: 1138 MGRAPCCEKMGLKRGPWSPEEDHLLIAYIGKNGHGNWRALPKQAGLLRCGKSCRLRWTNY 959
            M RAPCCEKMGLK+GPW+PEED +L++YI  NGHGNWRALPK AGLLRCGKSCRLRWTNY
Sbjct: 1    MVRAPCCEKMGLKKGPWTPEEDQVLVSYIQTNGHGNWRALPKLAGLLRCGKSCRLRWTNY 60

Query: 958  LRPDIKRGNFTREEEDSIINLHEMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLKPSE 779
            LRPDIKRGNFTREEEDSII LHEMLGNRWS IAARLPGRTDNEIKNVWHTHLKKRLK  +
Sbjct: 61   LRPDIKRGNFTREEEDSIIQLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQ 120

Query: 778  VTPDTNLHLIKSEANTXXXXXXXXXXXSITFSSPQRFENXXXXXXXXXXXXXXXXSGTE- 602
               ++  H   S+ N              TF++   F N                  +  
Sbjct: 121  PPQNSKKH---SKNNLDSKAPSTSQ----TFNNSDNFSNIQEDINGPVTGPNSPQRSSSE 173

Query: 601  -SAITGENTKISI-----------KEECSNSWETLPHTDESLWSNVMPMEHFSTMEEFST 458
             S +T ++T ++             +E ++S   +P  DES W+N +     S  +   T
Sbjct: 174  MSTVTADSTAMTTITIDDQNMFKQLDEMNSSESFIPEIDESFWTNDLSTGDNSNFDMEGT 233

Query: 457  IDINSEVQLPLSSVSSQT-----SAIEYGDEFWYNLFTKTEALSDLPEF 326
             +   +VQ P SSV  ++     + +E   +FWYN+F K+  L DLPEF
Sbjct: 234  GE-ELQVQFPFSSVKQESMDMVGTKLEDDMDFWYNVFIKSGDLLDLPEF 281


>dbj|BAA88221.1| myb-related transcription factor LBM1 [Nicotiana tabacum]
          Length = 281

 Score =  260 bits (664), Expect = 5e-67
 Identities = 144/289 (49%), Positives = 175/289 (60%), Gaps = 18/289 (6%)
 Frame = -1

Query: 1138 MGRAPCCEKMGLKRGPWSPEEDHLLIAYIGKNGHGNWRALPKQAGLLRCGKSCRLRWTNY 959
            M RAPCCEKMGLK+GPW+PEED +L++YI  NGHGNWRALPK AGLLRCGKSCRLRWTNY
Sbjct: 1    MVRAPCCEKMGLKKGPWTPEEDQILVSYIQTNGHGNWRALPKLAGLLRCGKSCRLRWTNY 60

Query: 958  LRPDIKRGNFTREEEDSIINLHEMLGNRWSTIAARLPGRTDNEIKNVWHTHLKKRLKPSE 779
            LRPDIKRGNFTREEEDSII LHEMLGNRWS IAARLPGRTDNEIKNVWHTHLKKRLK  +
Sbjct: 61   LRPDIKRGNFTREEEDSIIQLHEMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLKNYQ 120

Query: 778  VTPDTNLHLIKSEANTXXXXXXXXXXXSITFSSPQRFENXXXXXXXXXXXXXXXXSGTE- 602
               ++  H   S+ N              TF++   F N                  +  
Sbjct: 121  PPQNSKRH---SKNNLDSKAPSTSQ----TFNNSDNFSNIQEDINGPVTGPNSPQRSSSE 173

Query: 601  -SAITGENTKISI-----------KEECSNSWETLPHTDESLWSNVMPMEHFSTMEEFST 458
             S +T ++T ++             +E  +S   +P  DES W++ +     ST     T
Sbjct: 174  MSTVTVDSTAMTTITIDDQNMFKQLDEMDSSENFIPEIDESFWTDDLSTSDNSTFGMEGT 233

Query: 457  IDINSEVQLPLSSVSSQT-----SAIEYGDEFWYNLFTKTEALSDLPEF 326
                 +VQ P SSV  ++     + +E   +FWYN+F K+  L DLPEF
Sbjct: 234  -GGELQVQFPFSSVKQESMDMVGAKLEDDMDFWYNVFIKSGDLLDLPEF 281


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