BLASTX nr result

ID: Coptis24_contig00026722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026722
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69131.1| hypothetical protein VITISV_012047 [Vitis vinifera]    93   3e-17
ref|XP_003547273.1| PREDICTED: uncharacterized protein LOC100804...    77   2e-12
ref|XP_003534716.1| PREDICTED: uncharacterized protein LOC100804...    76   3e-12
gb|ABD32654.1| Zinc finger, RING-type [Medicago truncatula]            76   3e-12
ref|XP_003594158.1| hypothetical protein MTR_2g025080 [Medicago ...    76   3e-12

>emb|CAN69131.1| hypothetical protein VITISV_012047 [Vitis vinifera]
          Length = 207

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 61/138 (44%), Positives = 76/138 (55%), Gaps = 19/138 (13%)
 Frame = -1

Query: 417 MEGVDHRGKKWKSFKQRLGLKKMSCCGASWSFRATSNMVXXXXXXXXELTTTNA------ 256
           M+G+D  G+ W+S K+RLG KKMSCCGASW FR ++  V        +   T A      
Sbjct: 1   MDGLDRIGR-WRSIKRRLGFKKMSCCGASWGFRPSTMTVREDDNDDDDGVQTQAQAQAQS 59

Query: 255 ---GQNQVGNLM-DFDPDPDCVGHIPTT-GMNLATALAAEREFRAAQEWEGGSVGPTS-- 97
               Q +VG       PD  CVG  P +  MNLATALAAER+ RAAQ+     VGPT+  
Sbjct: 60  MAQAQEEVGQASPGISPDRGCVGEAPVSPRMNLATALAAERQMRAAQDVATVXVGPTNGG 119

Query: 96  ------ASPKRVSLIRLL 61
                  +P RVSL+RLL
Sbjct: 120 TSEGAPGTPLRVSLLRLL 137


>ref|XP_003547273.1| PREDICTED: uncharacterized protein LOC100804959 [Glycine max]
          Length = 209

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 58/153 (37%), Positives = 80/153 (52%), Gaps = 8/153 (5%)
 Frame = -1

Query: 495 ISDLGV---QEITVGRERKLVEFLREGEEMEGVDHRGKKWKSFKQRLGLKKMSCCGASWS 325
           +S LGV   + +   RE +        E+M+GVD   ++ +S K+R G   M CCGASW 
Sbjct: 1   MSQLGVALQESLRTQREARSTILGLLREQMDGVDGGTRRRRSLKERFGFIGMGCCGASWG 60

Query: 324 FRATSNMVXXXXXXXXELTTTNAGQNQVGNLMDFDPD----PDCVGHIPT-TGMNLATAL 160
           FR+ +              + N G+ +     + DP     P+CVG   + +GMNLA AL
Sbjct: 61  FRSDA-------------LSVNQGEQE--QQQETDPGRVAAPECVGPAGSGSGMNLAAAL 105

Query: 159 AAEREFRAAQEWEGGSVGPTSASPKRVSLIRLL 61
           AAER+ R  QE EGG V     +P RVSL+RLL
Sbjct: 106 AAERQLRVPQE-EGGGV----RAPWRVSLMRLL 133


>ref|XP_003534716.1| PREDICTED: uncharacterized protein LOC100804292 [Glycine max]
          Length = 196

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 50/122 (40%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
 Frame = -1

Query: 423 EEMEGVDHRGKKWKSFKQRLGLKKMSCCGASWSFRATSNMVXXXXXXXXELTTTNAGQNQ 244
           E+M+GVD   ++ +SFK+R G   M CCGA+W FR+ +            L+ T   Q Q
Sbjct: 25  EQMDGVDSGTRRRRSFKERFGFIGMGCCGATWGFRSDA------------LSVTQGEQQQ 72

Query: 243 VGNLMDFDPDPDCVGHIPT-TGMNLATALAAEREFRAAQEWEGGSVGPTSASPKRVSLIR 67
                  + DP+CVG     +GMNLA ALAAER+ R  QE    + G    +P RVSL+R
Sbjct: 73  Q------ETDPECVGPAGLGSGMNLAAALAAERQLRGPQEEAVRAPG----TPWRVSLMR 122

Query: 66  LL 61
           LL
Sbjct: 123 LL 124


>gb|ABD32654.1| Zinc finger, RING-type [Medicago truncatula]
          Length = 304

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 51/129 (39%), Positives = 71/129 (55%), Gaps = 8/129 (6%)
 Frame = -1

Query: 423 EEMEGVDHRGKKWKSFKQRLGLKKMSCCGASWSFRATSNMVXXXXXXXXELTTTNAGQNQ 244
           E+M+GVD   ++ +SFK+RLG   + CCGA+W FR++S+              +++ QNQ
Sbjct: 118 EQMDGVDGVPRRRRSFKERLGF--IGCCGANWGFRSSSS--------------SDSQQNQ 161

Query: 243 VGNLMDFDPDPD---CVGHIPTTG-----MNLATALAAEREFRAAQEWEGGSVGPTSASP 88
              ++D DP  D   CV  +  TG     MNLA ALAAER+ R       G  G    +P
Sbjct: 162 Q-RILDTDPSEDPNMCVAPVIQTGSSSSSMNLAAALAAERQLRGPAAETSGGGGRMPGTP 220

Query: 87  KRVSLIRLL 61
            RVSL+RLL
Sbjct: 221 WRVSLMRLL 229


>ref|XP_003594158.1| hypothetical protein MTR_2g025080 [Medicago truncatula]
           gi|355483206|gb|AES64409.1| hypothetical protein
           MTR_2g025080 [Medicago truncatula]
          Length = 278

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 51/129 (39%), Positives = 71/129 (55%), Gaps = 8/129 (6%)
 Frame = -1

Query: 423 EEMEGVDHRGKKWKSFKQRLGLKKMSCCGASWSFRATSNMVXXXXXXXXELTTTNAGQNQ 244
           E+M+GVD   ++ +SFK+RLG   + CCGA+W FR++S+              +++ QNQ
Sbjct: 27  EQMDGVDGVPRRRRSFKERLGF--IGCCGANWGFRSSSS--------------SDSQQNQ 70

Query: 243 VGNLMDFDPDPD---CVGHIPTTG-----MNLATALAAEREFRAAQEWEGGSVGPTSASP 88
              ++D DP  D   CV  +  TG     MNLA ALAAER+ R       G  G    +P
Sbjct: 71  Q-RILDTDPSEDPNMCVAPVIQTGSSSSSMNLAAALAAERQLRGPAAETSGGGGRMPGTP 129

Query: 87  KRVSLIRLL 61
            RVSL+RLL
Sbjct: 130 WRVSLMRLL 138


Top