BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026711
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27273.3| unnamed protein product [Vitis vinifera]               83   2e-14
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi...    83   2e-14
gb|AEW07919.1| Pinus taeda anonymous locus 0_14503_01 genomic se...    78   7e-13
gb|AFG55302.1| Pinus taeda anonymous locus 0_14503_01 genomic se...    78   9e-13
ref|XP_003624481.1| Pentatricopeptide repeat-containing protein ...    77   1e-12

>emb|CBI27273.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 36/64 (56%), Positives = 51/64 (79%)
 Frame = +3

Query: 6   RLHSNVKLAEFAVHNLFKLQSDNCGDYVLVSNIYASKGRWDDVKHVRKKMDERGVKKIPG 185
           R+H NV+L EFA  +LF+L+ +N G YVL+SNIYA+ GRWDDV  +R K++++G+KK+PG
Sbjct: 244 RVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPG 303

Query: 186 LSLI 197
            S I
Sbjct: 304 CSSI 307


>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 36/64 (56%), Positives = 51/64 (79%)
 Frame = +3

Query: 6   RLHSNVKLAEFAVHNLFKLQSDNCGDYVLVSNIYASKGRWDDVKHVRKKMDERGVKKIPG 185
           R+H NV+L EFA  +LF+L+ +N G YVL+SNIYA+ GRWDDV  +R K++++G+KK+PG
Sbjct: 546 RVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPG 605

Query: 186 LSLI 197
            S I
Sbjct: 606 CSSI 609


>gb|AEW07919.1| Pinus taeda anonymous locus 0_14503_01 genomic sequence
          Length = 160

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 36/69 (52%), Positives = 52/69 (75%)
 Frame = +3

Query: 6   RLHSNVKLAEFAVHNLFKLQSDNCGDYVLVSNIYASKGRWDDVKHVRKKMDERGVKKIPG 185
           R+H N++LAE A   LF+LQ +N G+YVL+SNIYA+ G+WD+V  +RK M ++G+K+ PG
Sbjct: 58  RIHLNIELAERAAKELFELQPENAGNYVLLSNIYAAAGKWDNVGKIRKIMRDKGLKRTPG 117

Query: 186 LSLI*TKDR 212
            S I  K+R
Sbjct: 118 CSWIEHKNR 126


>gb|AFG55302.1| Pinus taeda anonymous locus 0_14503_01 genomic sequence
          Length = 160

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 36/69 (52%), Positives = 50/69 (72%)
 Frame = +3

Query: 6   RLHSNVKLAEFAVHNLFKLQSDNCGDYVLVSNIYASKGRWDDVKHVRKKMDERGVKKIPG 185
           R+H N++LAE     LF+LQ +N G+YVL+SNIYA+ G WD+V  +RK M ++G+K+ PG
Sbjct: 58  RIHLNIELAERVAKELFELQPENAGNYVLLSNIYAAAGEWDNVGKIRKIMKDKGLKRSPG 117

Query: 186 LSLI*TKDR 212
            S I  KDR
Sbjct: 118 CSWIEHKDR 126


>ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240699|gb|ABD32557.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355499496|gb|AES80699.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 672

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/69 (52%), Positives = 45/69 (65%)
 Frame = +3

Query: 6   RLHSNVKLAEFAVHNLFKLQSDNCGDYVLVSNIYASKGRWDDVKHVRKKMDERGVKKIPG 185
           R+H NV+L E +   LFKL   NCG YVL+SNIYA  GRWDDV+ +R  M   G+ K PG
Sbjct: 480 RIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPG 539

Query: 186 LSLI*TKDR 212
            S++  K R
Sbjct: 540 YSIVEHKGR 548