BLASTX nr result

ID: Coptis24_contig00026710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026710
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265371.1| PREDICTED: acyl-CoA synthetase family member...   331   8e-89
ref|XP_002325887.1| predicted protein [Populus trichocarpa] gi|2...   314   1e-83
ref|XP_002524008.1| AMP dependent ligase, putative [Ricinus comm...   310   3e-82
ref|XP_003521941.1| PREDICTED: acyl-CoA synthetase family member...   301   9e-80
ref|XP_002870455.1| hypothetical protein ARALYDRAFT_330218 [Arab...   301   9e-80

>ref|XP_002265371.1| PREDICTED: acyl-CoA synthetase family member 4 [Vitis vinifera]
           gi|296088768|emb|CBI38218.3| unnamed protein product
           [Vitis vinifera]
          Length = 1175

 Score =  331 bits (849), Expect = 8e-89
 Identities = 157/240 (65%), Positives = 194/240 (80%)
 Frame = -2

Query: 725 FQLEESDWLVEQSSCPVLEMSMKENREKVFGCSELVWPCQSMRKRKFCYLMYTSGSTGKP 546
           F+L++S WLV+ +SCPVL MSM++  +     SELVWPC+    R FCYLMYTSGSTGKP
Sbjct: 200 FKLDKSHWLVDCNSCPVLSMSMEDKLQNHSDPSELVWPCEKEELRLFCYLMYTSGSTGKP 259

Query: 545 KGVCGTEIGLLNRYLWMQELFPLHVEEILLFKTSISFIDHLQEFLSGILSSVPLVIPPFE 366
           KG+CGTE GLLNR+LWMQE +PL  EEILLFKTSISF+DHLQEFL  ILS+  LVIPPF 
Sbjct: 260 KGICGTEKGLLNRFLWMQEFYPLLGEEILLFKTSISFVDHLQEFLGAILSACTLVIPPFN 319

Query: 365 EFRINPFYIAEFLKAYRISRLMIVPSVMRAILPAMQSPHNILVQSFFKVLVFSGEVLPIS 186
           E + NPF++ ++LKAY ++R+  VPS+MR I+PA+QS  N+ VQ+  K LV SGE+LP+S
Sbjct: 320 ELKQNPFHVIDYLKAYSVTRMTAVPSLMRVIIPALQSEENMQVQNSLKFLVLSGEILPLS 379

Query: 185 LCHVLHKLLPKISILNLYGSTEVSGDCTYFDCKRLPTVLETDVLSSVPIGTPISNCDIIL 6
           L + L  LLP+ SILNLYGSTEVSGDCTYFDC+RLP +LE+D LSSVPIG PISNC+++L
Sbjct: 380 LWNTLSSLLPQTSILNLYGSTEVSGDCTYFDCRRLPRILESDSLSSVPIGIPISNCNVML 439


>ref|XP_002325887.1| predicted protein [Populus trichocarpa] gi|222862762|gb|EEF00269.1|
           predicted protein [Populus trichocarpa]
          Length = 1058

 Score =  314 bits (804), Expect = 1e-83
 Identities = 153/238 (64%), Positives = 187/238 (78%)
 Frame = -2

Query: 719 LEESDWLVEQSSCPVLEMSMKENREKVFGCSELVWPCQSMRKRKFCYLMYTSGSTGKPKG 540
           + E+DWLV++S C VL  SM E+ E   G SEL WPC++ ++R FCYLMYTSGSTGKPKG
Sbjct: 60  INEADWLVDRSGCRVLCFSM-EDSECSGGPSELAWPCENEKERLFCYLMYTSGSTGKPKG 118

Query: 539 VCGTEIGLLNRYLWMQELFPLHVEEILLFKTSISFIDHLQEFLSGILSSVPLVIPPFEEF 360
           VCGTE GLLNR+ WMQEL+PLH EE LLFKTSISFIDHLQEFLS +L++  LVIPPF E 
Sbjct: 119 VCGTEQGLLNRFWWMQELYPLHGEEALLFKTSISFIDHLQEFLSAMLTTCTLVIPPFHEL 178

Query: 359 RINPFYIAEFLKAYRISRLMIVPSVMRAILPAMQSPHNILVQSFFKVLVFSGEVLPISLC 180
           +  PF +   L+AY I+RL  VPS+MRAILP +Q  H++ +Q+  K+LV SGEV  +SL 
Sbjct: 179 KEYPFSLVNVLQAYSINRLTAVPSLMRAILPVLQRQHSMQIQTSLKLLVLSGEVFSLSLW 238

Query: 179 HVLHKLLPKISILNLYGSTEVSGDCTYFDCKRLPTVLETDVLSSVPIGTPISNCDIIL 6
             L  LLP+ +ILNLYG+TEVSGDCTYFDCKRLP +LET+ L+S+PIG PISNCD+ L
Sbjct: 239 DALSTLLPRTTILNLYGTTEVSGDCTYFDCKRLPAILETEALTSIPIGLPISNCDVAL 296


>ref|XP_002524008.1| AMP dependent ligase, putative [Ricinus communis]
           gi|223536735|gb|EEF38376.1| AMP dependent ligase,
           putative [Ricinus communis]
          Length = 1144

 Score =  310 bits (793), Expect = 3e-82
 Identities = 147/236 (62%), Positives = 185/236 (78%)
 Frame = -2

Query: 713 ESDWLVEQSSCPVLEMSMKENREKVFGCSELVWPCQSMRKRKFCYLMYTSGSTGKPKGVC 534
           +S+WLV+  SC VL  +++E+ E       L WPC+   KR FCYLMYTSGS+GKPKGVC
Sbjct: 158 DSNWLVQSVSCRVLCFNIEESIEGCVDVLPLAWPCEKENKRLFCYLMYTSGSSGKPKGVC 217

Query: 533 GTEIGLLNRYLWMQELFPLHVEEILLFKTSISFIDHLQEFLSGILSSVPLVIPPFEEFRI 354
           GTE+GLLNR+LWMQEL+PL  EE+LLFKTSISFIDHLQEF   +L++  LVIPPF + + 
Sbjct: 218 GTELGLLNRFLWMQELYPLLGEEVLLFKTSISFIDHLQEFFGAMLTATTLVIPPFSQLKK 277

Query: 353 NPFYIAEFLKAYRISRLMIVPSVMRAILPAMQSPHNILVQSFFKVLVFSGEVLPISLCHV 174
           +PF +  FL+ Y I+RL+ VPS++RAILPA+QS  N+ +Q   K+LV SGE+ P+SL  V
Sbjct: 278 DPFSLLHFLQVYSINRLIAVPSLIRAILPALQSQCNMQIQRSLKLLVLSGEIFPLSLWDV 337

Query: 173 LHKLLPKISILNLYGSTEVSGDCTYFDCKRLPTVLETDVLSSVPIGTPISNCDIIL 6
           L  LLP+ SILNLYG+TEVSGDCTYFDCKRLP +LE + L+SVPIG PISNCD++L
Sbjct: 338 LSDLLPRTSILNLYGTTEVSGDCTYFDCKRLPMILEKEALTSVPIGVPISNCDVVL 393


>ref|XP_003521941.1| PREDICTED: acyl-CoA synthetase family member 4-like [Glycine max]
          Length = 1153

 Score =  301 bits (771), Expect = 9e-80
 Identities = 142/239 (59%), Positives = 187/239 (78%)
 Frame = -2

Query: 722 QLEESDWLVEQSSCPVLEMSMKENREKVFGCSELVWPCQSMRKRKFCYLMYTSGSTGKPK 543
           +L+ES WLV+  SCPVL  S+ EN +   G ++L WPC + ++R F YLMYTSGSTGKPK
Sbjct: 179 KLDESHWLVKSISCPVLNYSIDENIQVCSGPTDLTWPCANEKRRSFSYLMYTSGSTGKPK 238

Query: 542 GVCGTEIGLLNRYLWMQELFPLHVEEILLFKTSISFIDHLQEFLSGILSSVPLVIPPFEE 363
           GVCGTE GL NR+LWMQ ++PL+ +E+LLF +S+SFIDHLQEFLS IL++  LVIPPF E
Sbjct: 239 GVCGTEQGLSNRFLWMQGMYPLNGQELLLFNSSVSFIDHLQEFLSAILTACVLVIPPFNE 298

Query: 362 FRINPFYIAEFLKAYRISRLMIVPSVMRAILPAMQSPHNILVQSFFKVLVFSGEVLPISL 183
            + N + I +FL+AY ++RL  VPS+MR ILP +Q+  N+LV++  K+LV SGE  P++L
Sbjct: 299 LKENIYSIIDFLQAYFVNRLTTVPSLMRTILPGLQTHANMLVENSLKLLVLSGETFPLTL 358

Query: 182 CHVLHKLLPKISILNLYGSTEVSGDCTYFDCKRLPTVLETDVLSSVPIGTPISNCDIIL 6
             +L  +LPK SILNLYGSTEVSGDCTYFDCKR+P +L+ + L SVPIG PI+NCD+++
Sbjct: 359 WEMLSTILPKTSILNLYGSTEVSGDCTYFDCKRMPLILKEEKLFSVPIGLPITNCDVMM 417


>ref|XP_002870455.1| hypothetical protein ARALYDRAFT_330218 [Arabidopsis lyrata subsp.
           lyrata] gi|297316291|gb|EFH46714.1| hypothetical protein
           ARALYDRAFT_330218 [Arabidopsis lyrata subsp. lyrata]
          Length = 1120

 Score =  301 bits (771), Expect = 9e-80
 Identities = 147/239 (61%), Positives = 176/239 (73%)
 Frame = -2

Query: 719 LEESDWLVEQSSCPVLEMSMKENREKVFGCSELVWPCQSMRKRKFCYLMYTSGSTGKPKG 540
           LE S WLVE   CPVL  SM E   +  GCS  VWPC+  R+RKFCYLMYTSGSTGKPKG
Sbjct: 147 LERSHWLVETKVCPVLLFSMDEKLSEETGCSSFVWPCKKQRQRKFCYLMYTSGSTGKPKG 206

Query: 539 VCGTEIGLLNRYLWMQELFPLHVEEILLFKTSISFIDHLQEFLSGILSSVPLVIPPFEEF 360
           VCGTE GLLNR++WMQEL+P+  E+   FKTS+ FIDHLQEFL  IL+S PLVIPPF   
Sbjct: 207 VCGTEQGLLNRFVWMQELYPVVGEQRSAFKTSVGFIDHLQEFLGPILNSTPLVIPPFTLL 266

Query: 359 RINPFYIAEFLKAYRISRLMIVPSVMRAILPAMQSPHNILVQSFFKVLVFSGEVLPISLC 180
           + N   I +FL+ Y ISRL+ VPS++RAILP +Q   +  +QS  K++V SGE  P+SL 
Sbjct: 267 KENMTSIIDFLEVYSISRLLAVPSMIRAILPTLQHRGHNKLQSSLKLVVLSGEPFPVSLW 326

Query: 179 HVLHKLLPKISILNLYGSTEVSGDCTYFDCKRLPTVLETDVLSSVPIGTPISNCDIILF 3
             LH LLP+   LNLYGSTEVSGDCTYFDC  LP +L+T+ + SVPIG PISNC ++LF
Sbjct: 327 DSLHSLLPETCFLNLYGSTEVSGDCTYFDCSGLPRILKTEEIGSVPIGKPISNCKVLLF 385


Top