BLASTX nr result

ID: Coptis24_contig00026704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00026704
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262639.1| PREDICTED: uncharacterized protein LOC100259...    89   3e-16
emb|CBI25671.3| unnamed protein product [Vitis vinifera]               89   3e-16
ref|XP_002532740.1| conserved hypothetical protein [Ricinus comm...    84   1e-14
ref|NP_566301.1| uncharacterized protein [Arabidopsis thaliana] ...    82   6e-14
ref|XP_003551401.1| PREDICTED: uncharacterized protein LOC100812...    80   1e-13

>ref|XP_002262639.1| PREDICTED: uncharacterized protein LOC100259020 [Vitis vinifera]
          Length = 534

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/61 (67%), Positives = 49/61 (80%), Gaps = 3/61 (4%)
 Frame = +1

Query: 193 LLGEKWCFCKGGGKTERMKGSIFNTKGSSMATV---CNGTGFLVHRNLLLTTHVNLPSVN 363
           +LGE WCFCKG GK+ERMK +IF  KG +MAT+    + TGFL+HRNLLLTTHVNLPS+ 
Sbjct: 3   VLGESWCFCKGAGKSERMKANIFTAKGPAMATISSSSSATGFLIHRNLLLTTHVNLPSLA 62

Query: 364 A 366
           A
Sbjct: 63  A 63


>emb|CBI25671.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 41/61 (67%), Positives = 49/61 (80%), Gaps = 3/61 (4%)
 Frame = +1

Query: 193 LLGEKWCFCKGGGKTERMKGSIFNTKGSSMATV---CNGTGFLVHRNLLLTTHVNLPSVN 363
           +LGE WCFCKG GK+ERMK +IF  KG +MAT+    + TGFL+HRNLLLTTHVNLPS+ 
Sbjct: 3   VLGESWCFCKGAGKSERMKANIFTAKGPAMATISSSSSATGFLIHRNLLLTTHVNLPSLA 62

Query: 364 A 366
           A
Sbjct: 63  A 63


>ref|XP_002532740.1| conserved hypothetical protein [Ricinus communis]
           gi|223527517|gb|EEF29642.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 428

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/65 (61%), Positives = 50/65 (76%), Gaps = 7/65 (10%)
 Frame = +1

Query: 193 LLGEKWCFCKGGGKTERMKGSIFNTKGSSMATV-------CNGTGFLVHRNLLLTTHVNL 351
           +L E WCFCKG GK+E+MK +IF+ KGS+MAT+        +GTGFL+HRNLLLT HVN+
Sbjct: 3   VLIESWCFCKGVGKSEKMKAAIFSGKGSAMATISSAAGNGTSGTGFLIHRNLLLTAHVNI 62

Query: 352 PSVNA 366
           PSV A
Sbjct: 63  PSVAA 67


>ref|NP_566301.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6642644|gb|AAF20225.1|AC012395_12 hypothetical
           protein [Arabidopsis thaliana]
           gi|14334614|gb|AAK59485.1| unknown protein [Arabidopsis
           thaliana] gi|18491191|gb|AAL69498.1| unknown protein
           [Arabidopsis thaliana] gi|21592441|gb|AAM64392.1|
           unknown [Arabidopsis thaliana]
           gi|332640994|gb|AEE74515.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 547

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/69 (59%), Positives = 51/69 (73%), Gaps = 8/69 (11%)
 Frame = +1

Query: 184 MRVLLGEKWCFCKGGGKTERMKGSIFNTKGSSMAT--------VCNGTGFLVHRNLLLTT 339
           M V+L + WCFCKG GK+E+MKGSIF  K  +MA         V +GTGFL+HRNLLLTT
Sbjct: 1   MGVIL-DSWCFCKGVGKSEKMKGSIFTGKAPAMARISVSGPNGVTSGTGFLIHRNLLLTT 59

Query: 340 HVNLPSVNA 366
           H+NLPS++A
Sbjct: 60  HLNLPSISA 68


>ref|XP_003551401.1| PREDICTED: uncharacterized protein LOC100812315 [Glycine max]
          Length = 550

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/67 (59%), Positives = 46/67 (68%), Gaps = 8/67 (11%)
 Frame = +1

Query: 190 VLLGEKWCFCKGGGKTERMKGSIFNTKGSSMATV--------CNGTGFLVHRNLLLTTHV 345
           V L E WCFCKG  K+ERMK +IF  K  +MAT+         +GTGFL+HRNLLLTTH 
Sbjct: 4   VSLRESWCFCKGVSKSERMKAAIFTGKAQAMATIAATAAPNGASGTGFLIHRNLLLTTHA 63

Query: 346 NLPSVNA 366
           NLPSV A
Sbjct: 64  NLPSVVA 70


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